RNA–Protein interactions for RNA: ENST00000549658.2

AC008740.1-201, humanhuman

BASIC

Gene AC008740.1, Length 255 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008740.1-201ENST00000549658 NISCHQ9Y2I1 1504 aa27.71■■■□□ 2.03
AC008740.1-201ENST00000549658 CCDC180Q9P1Z9 1646 aa24.53■■□□□ 1.52
AC008740.1-201ENST00000549658 ABCC9O60706 1549 aa23.77■■□□□ 1.4
AC008740.1-201ENST00000549658 DCAF8L2P0C7V8 631 aa23.22■■□□□ 1.31
AC008740.1-201ENST00000549658 ZCCHC6Q5VYS8 1495 aaKnown RBP23.1■■□□□ 1.29
AC008740.1-201ENST00000549658 NACADO15069 1562 aa23.01■■□□□ 1.27
AC008740.1-201ENST00000549658 RB1CC1Q8TDY2 1594 aa22.99■■□□□ 1.27
AC008740.1-201ENST00000549658 DCAF1Q9Y4B6 1507 aa22.91■■□□□ 1.26
AC008740.1-201ENST00000549658 MYO15BQ96JP2 1530 aa22.89■■□□□ 1.26
AC008740.1-201ENST00000549658 UNC13AQ9UPW8 1703 aa22.5■■□□□ 1.19
AC008740.1-201ENST00000549658 SCRIBQ14160 1630 aa22.42■■□□□ 1.18
AC008740.1-201ENST00000549658 PABPN1Q86U42 306 aaKnown RBP eCLIP22.28■■□□□ 1.16
AC008740.1-201ENST00000549658 BICRAQ9NZM4 1560 aa22.21■■□□□ 1.15
AC008740.1-201ENST00000549658 SHROOM4Q9ULL8 1493 aa22.13■■□□□ 1.13
AC008740.1-201ENST00000549658 EIF4G1Q04637 1599 aaKnown RBP21.64■■□□□ 1.05
AC008740.1-201ENST00000549658 CECR2Q9BXF3 1484 aa21.54■■□□□ 1.04
AC008740.1-201ENST00000549658 DNAJC5BQ9UF47 199 aa21.54■■□□□ 1.04
AC008740.1-201ENST00000549658 CC2D2AQ9P2K1 1620 aa21.51■■□□□ 1.03
AC008740.1-201ENST00000549658 BAZ1AQ9NRL2 1556 aaPredicted RBP21.48■■□□□ 1.03
AC008740.1-201ENST00000549658 SMARCA4P51532 1647 aa21.45■■□□□ 1.02
AC008740.1-201ENST00000549658 MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
AC008740.1-201ENST00000549658 SMARCA2P51531 1590 aa21.27■■□□□ 1
AC008740.1-201ENST00000549658 ATAD2BQ9ULI0 1458 aa21.25■□□□□ 0.99
AC008740.1-201ENST00000549658 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
AC008740.1-201ENST00000549658 NCAPD3P42695 1498 aa21.2■□□□□ 0.98
AC008740.1-201ENST00000549658 PEG3Q9GZU2 1588 aa21.19■□□□□ 0.98
AC008740.1-201ENST00000549658 WIZO95785 1651 aa21.18■□□□□ 0.98
AC008740.1-201ENST00000549658 BAZ1BQ9UIG0 1483 aaKnown RBP21.13■□□□□ 0.97
AC008740.1-201ENST00000549658 HMGXB3Q12766 1538 aa21.11■□□□□ 0.97
AC008740.1-201ENST00000549658 SUPT5HO00267 1087 aaKnown RBP21■□□□□ 0.95
AC008740.1-201ENST00000549658 TOP2AP11388 1531 aaKnown RBP20.94■□□□□ 0.94
AC008740.1-201ENST00000549658 CCDC88BA6NC98 1476 aa20.7■□□□□ 0.9
AC008740.1-201ENST00000549658 LAMC3Q9Y6N6 1575 aa20.63■□□□□ 0.89
AC008740.1-201ENST00000549658 NESP48681 1621 aa20.63■□□□□ 0.89
AC008740.1-201ENST00000549658 CADPSQ9ULU8 1353 aa20.62■□□□□ 0.89
AC008740.1-201ENST00000549658 CFTRP13569 1480 aa20.52■□□□□ 0.88
AC008740.1-201ENST00000549658 ERCC6Q03468 1493 aa20.5■□□□□ 0.87
AC008740.1-201ENST00000549658 PDS5BQ9NTI5 1447 aa20.5■□□□□ 0.87
AC008740.1-201ENST00000549658 PRDM2Q13029 1718 aa20.49■□□□□ 0.87
AC008740.1-201ENST00000549658 KIF21AQ7Z4S6 1674 aa20.43■□□□□ 0.86
AC008740.1-201ENST00000549658 FANCD2Q9BXW9 1451 aa20.39■□□□□ 0.85
AC008740.1-201ENST00000549658 CEP164Q9UPV0 1460 aa20.35■□□□□ 0.85
AC008740.1-201ENST00000549658 MRC2Q9UBG0 1479 aa20.24■□□□□ 0.83
AC008740.1-201ENST00000549658 THOC2Q8NI27 1593 aaKnown RBP20.22■□□□□ 0.83
AC008740.1-201ENST00000549658 ABCC8Q09428 1581 aa20.14■□□□□ 0.81
AC008740.1-201ENST00000549658 WDR62O43379 1518 aa20.13■□□□□ 0.81
AC008740.1-201ENST00000549658 URB2Q14146 1524 aaKnown RBP20.13■□□□□ 0.81
AC008740.1-201ENST00000549658 CUX2O14529 1486 aa20.13■□□□□ 0.81
AC008740.1-201ENST00000549658 DNMBPQ6XZF7 1577 aa20.08■□□□□ 0.81
AC008740.1-201ENST00000549658 TOPBP1Q92547 1522 aa20.08■□□□□ 0.81
AC008740.1-201ENST00000549658 WRNQ14191 1432 aaPredicted RBP eCLIP20.02■□□□□ 0.8
AC008740.1-201ENST00000549658 CUX1P39880 1505 aa20.02■□□□□ 0.79
AC008740.1-201ENST00000549658 TOP2BQ02880 1626 aa19.94■□□□□ 0.78
AC008740.1-201ENST00000549658 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
AC008740.1-201ENST00000549658 FGD5Q6ZNL6 1462 aa19.92■□□□□ 0.78
AC008740.1-201ENST00000549658 SYNJ1O43426 1573 aa19.92■□□□□ 0.78
AC008740.1-201ENST00000549658 POLA1P09884 1462 aaPredicted RBP19.92■□□□□ 0.78
AC008740.1-201ENST00000549658 SOGA1O94964 1423 aa19.9■□□□□ 0.78
AC008740.1-201ENST00000549658 IFT140Q96RY7 1462 aa19.9■□□□□ 0.78
AC008740.1-201ENST00000549658 RAD54L2Q9Y4B4 1467 aa19.85■□□□□ 0.77
AC008740.1-201ENST00000549658 TARBP1Q13395 1621 aaKnown RBP19.83■□□□□ 0.76
AC008740.1-201ENST00000549658 TRIM41Q8WV44 630 aa19.82■□□□□ 0.76
AC008740.1-201ENST00000549658 ZNF608Q9ULD9 1512 aaPredicted RBP19.76■□□□□ 0.75
AC008740.1-201ENST00000549658 TDRD9Q8NDG6 1382 aaKnown RBP19.74■□□□□ 0.75
AC008740.1-201ENST00000549658 WDR97A6NE52 1622 aa19.73■□□□□ 0.75
AC008740.1-201ENST00000549658 ABCA10Q8WWZ4 1543 aa19.73■□□□□ 0.75
AC008740.1-201ENST00000549658 AQRO60306 1485 aaKnown RBP eCLIP19.72■□□□□ 0.75
AC008740.1-201ENST00000549658 EIF4G3O43432 1585 aaKnown RBP19.71■□□□□ 0.75
AC008740.1-201ENST00000549658 CHIC1Q5VXU3 224 aa19.7■□□□□ 0.74
AC008740.1-201ENST00000549658 GAPVD1Q14C86 1478 aa19.66■□□□□ 0.74
AC008740.1-201ENST00000549658 PBRM1Q86U86 1689 aa19.62■□□□□ 0.73
AC008740.1-201ENST00000549658 ABCA5Q8WWZ7 1642 aa19.62■□□□□ 0.73
AC008740.1-201ENST00000549658 GRIN2BQ13224 1484 aa19.6■□□□□ 0.73
AC008740.1-201ENST00000549658 KIF27Q86VH2 1401 aa19.59■□□□□ 0.73
AC008740.1-201ENST00000549658 FBLN2P98095 1184 aa19.53■□□□□ 0.72
AC008740.1-201ENST00000549658 SNAPC4Q5SXM2 1469 aa19.53■□□□□ 0.72
AC008740.1-201ENST00000549658 ERICH3Q5RHP9 1530 aa19.51■□□□□ 0.71
AC008740.1-201ENST00000549658 MAGI1Q96QZ7 1491 aaPredicted RBP19.51■□□□□ 0.71
AC008740.1-201ENST00000549658 CHMP7Q8WUX9 453 aaPredicted RBP19.5■□□□□ 0.71
AC008740.1-201ENST00000549658 RUSC2Q8N2Y8 1516 aa19.47■□□□□ 0.71
AC008740.1-201ENST00000549658 CHD1O14646 1710 aa19.47■□□□□ 0.71
AC008740.1-201ENST00000549658 IGF1RP08069 1367 aa19.45■□□□□ 0.7
AC008740.1-201ENST00000549658 SYNJ2O15056 1496 aa19.44■□□□□ 0.7
AC008740.1-201ENST00000549658 OSCARQ8IYS5 282 aa19.43■□□□□ 0.7
AC008740.1-201ENST00000549658 FHAD1B1AJZ9 1412 aa19.42■□□□□ 0.7
AC008740.1-201ENST00000549658 FAM9AQ8IZU1 332 aaPredicted RBP19.42■□□□□ 0.7
AC008740.1-201ENST00000549658 CUL7Q14999 1698 aa19.42■□□□□ 0.7
AC008740.1-201ENST00000549658 ADAMTS12P58397 1594 aa19.41■□□□□ 0.7
AC008740.1-201ENST00000549658 EEA1Q15075 1411 aa19.4■□□□□ 0.7
AC008740.1-201ENST00000549658 CARMIL1Q5VZK9 1371 aa19.38■□□□□ 0.69
AC008740.1-201ENST00000549658 CSRNP3Q8WYN3 585 aa19.38■□□□□ 0.69
AC008740.1-201ENST00000549658 GRIN2AQ12879 1464 aa19.34■□□□□ 0.69
AC008740.1-201ENST00000549658 RAPGEF2Q9Y4G8 1499 aa19.29■□□□□ 0.68
AC008740.1-201ENST00000549658 PRXQ9BXM0 1461 aa19.23■□□□□ 0.67
AC008740.1-201ENST00000549658 DNAJC5Q9H3Z4 198 aa19.23■□□□□ 0.67
AC008740.1-201ENST00000549658 CEP170Q5SW79 1584 aa19.22■□□□□ 0.67
AC008740.1-201ENST00000549658 NUP160Q12769 1436 aa19.21■□□□□ 0.67
AC008740.1-201ENST00000549658 CLASP1Q7Z460 1538 aa19.18■□□□□ 0.66
AC008740.1-201ENST00000549658 EHMT2Q96KQ7 1210 aa19.17■□□□□ 0.66
AC008740.1-201ENST00000549658 KIF21BO75037 1637 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms