RNA–Protein interactions for RNA: ENST00000549357.1

AC025575.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC025575.2, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025575.2-201ENST00000549357 NISCHQ9Y2I1 1504 aa26■■□□□ 1.75
AC025575.2-201ENST00000549357 CCDC180Q9P1Z9 1646 aa23.22■■□□□ 1.31
AC025575.2-201ENST00000549357 ABCC9O60706 1549 aa23.16■■□□□ 1.3
AC025575.2-201ENST00000549357 RB1CC1Q8TDY2 1594 aa22.09■■□□□ 1.13
AC025575.2-201ENST00000549357 NACADO15069 1562 aa21.99■■□□□ 1.11
AC025575.2-201ENST00000549357 DCAF8L2P0C7V8 631 aa21.91■■□□□ 1.1
AC025575.2-201ENST00000549357 MYO15BQ96JP2 1530 aa21.77■■□□□ 1.08
AC025575.2-201ENST00000549357 DNAJC5BQ9UF47 199 aa21.65■■□□□ 1.06
AC025575.2-201ENST00000549357 PABPN1Q86U42 306 aaKnown RBP eCLIP21.61■■□□□ 1.05
AC025575.2-201ENST00000549357 ZCCHC6Q5VYS8 1495 aaKnown RBP21.58■■□□□ 1.05
AC025575.2-201ENST00000549357 DCAF1Q9Y4B6 1507 aa21.51■■□□□ 1.03
AC025575.2-201ENST00000549357 UNC13AQ9UPW8 1703 aa21.45■■□□□ 1.02
AC025575.2-201ENST00000549357 BICRAQ9NZM4 1560 aa21.42■■□□□ 1.02
AC025575.2-201ENST00000549357 SHROOM4Q9ULL8 1493 aa21.23■□□□□ 0.99
AC025575.2-201ENST00000549357 SCRIBQ14160 1630 aa21.17■□□□□ 0.98
AC025575.2-201ENST00000549357 EIF4G1Q04637 1599 aaKnown RBP20.91■□□□□ 0.94
AC025575.2-201ENST00000549357 CC2D2AQ9P2K1 1620 aa20.9■□□□□ 0.94
AC025575.2-201ENST00000549357 CECR2Q9BXF3 1484 aa20.88■□□□□ 0.93
AC025575.2-201ENST00000549357 NCAPD3P42695 1498 aa20.33■□□□□ 0.85
AC025575.2-201ENST00000549357 ATAD2BQ9ULI0 1458 aa20.27■□□□□ 0.84
AC025575.2-201ENST00000549357 SMARCA4P51532 1647 aa20.22■□□□□ 0.83
AC025575.2-201ENST00000549357 SMARCA2P51531 1590 aa20.2■□□□□ 0.82
AC025575.2-201ENST00000549357 BAZ1AQ9NRL2 1556 aaPredicted RBP20.18■□□□□ 0.82
AC025575.2-201ENST00000549357 HMGXB3Q12766 1538 aa20.16■□□□□ 0.82
AC025575.2-201ENST00000549357 BAZ1BQ9UIG0 1483 aaKnown RBP20.06■□□□□ 0.8
AC025575.2-201ENST00000549357 PEG3Q9GZU2 1588 aa20.06■□□□□ 0.8
AC025575.2-201ENST00000549357 MROH2BQ7Z745 1585 aa20.02■□□□□ 0.8
AC025575.2-201ENST00000549357 ERCC6Q03468 1493 aa20■□□□□ 0.79
AC025575.2-201ENST00000549357 CUX2O14529 1486 aa19.95■□□□□ 0.78
AC025575.2-201ENST00000549357 NESP48681 1621 aa19.91■□□□□ 0.78
AC025575.2-201ENST00000549357 DNAJC5Q9H3Z4 198 aa19.83■□□□□ 0.77
AC025575.2-201ENST00000549357 LAMC3Q9Y6N6 1575 aa19.8■□□□□ 0.76
AC025575.2-201ENST00000549357 PDS5BQ9NTI5 1447 aa19.74■□□□□ 0.75
AC025575.2-201ENST00000549357 CADPSQ9ULU8 1353 aa19.73■□□□□ 0.75
AC025575.2-201ENST00000549357 WIZO95785 1651 aa19.73■□□□□ 0.75
AC025575.2-201ENST00000549357 RSF1Q96T23 1441 aaPredicted RBP19.69■□□□□ 0.74
AC025575.2-201ENST00000549357 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
AC025575.2-201ENST00000549357 KIF21AQ7Z4S6 1674 aa19.58■□□□□ 0.72
AC025575.2-201ENST00000549357 TOP2AP11388 1531 aaKnown RBP19.55■□□□□ 0.72
AC025575.2-201ENST00000549357 MRC2Q9UBG0 1479 aa19.54■□□□□ 0.72
AC025575.2-201ENST00000549357 CFTRP13569 1480 aa19.52■□□□□ 0.72
AC025575.2-201ENST00000549357 FANCD2Q9BXW9 1451 aa19.48■□□□□ 0.71
AC025575.2-201ENST00000549357 CEP164Q9UPV0 1460 aa19.48■□□□□ 0.71
AC025575.2-201ENST00000549357 WDR62O43379 1518 aa19.47■□□□□ 0.71
AC025575.2-201ENST00000549357 CCDC88BA6NC98 1476 aa19.35■□□□□ 0.69
AC025575.2-201ENST00000549357 URB2Q14146 1524 aaKnown RBP19.29■□□□□ 0.68
AC025575.2-201ENST00000549357 PRDM2Q13029 1718 aa19.16■□□□□ 0.66
AC025575.2-201ENST00000549357 TOPBP1Q92547 1522 aa19.1■□□□□ 0.65
AC025575.2-201ENST00000549357 IFT140Q96RY7 1462 aa19.1■□□□□ 0.65
AC025575.2-201ENST00000549357 ABCC8Q09428 1581 aa19.1■□□□□ 0.65
AC025575.2-201ENST00000549357 OSCARQ8IYS5 282 aa19.08■□□□□ 0.64
AC025575.2-201ENST00000549357 ZNF608Q9ULD9 1512 aaPredicted RBP19.04■□□□□ 0.64
AC025575.2-201ENST00000549357 DNMBPQ6XZF7 1577 aa19.02■□□□□ 0.64
AC025575.2-201ENST00000549357 TRIM41Q8WV44 630 aa18.96■□□□□ 0.63
AC025575.2-201ENST00000549357 POLA1P09884 1462 aaPredicted RBP18.92■□□□□ 0.62
AC025575.2-201ENST00000549357 SUPT5HO00267 1087 aaKnown RBP18.89■□□□□ 0.61
AC025575.2-201ENST00000549357 AQRO60306 1485 aaKnown RBP eCLIP18.89■□□□□ 0.61
AC025575.2-201ENST00000549357 EIF4G3O43432 1585 aaKnown RBP18.89■□□□□ 0.61
AC025575.2-201ENST00000549357 TARBP1Q13395 1621 aaKnown RBP18.89■□□□□ 0.61
AC025575.2-201ENST00000549357 SOGA1O94964 1423 aa18.85■□□□□ 0.61
AC025575.2-201ENST00000549357 RAD54L2Q9Y4B4 1467 aa18.84■□□□□ 0.61
AC025575.2-201ENST00000549357 FGD5Q6ZNL6 1462 aa18.81■□□□□ 0.6
AC025575.2-201ENST00000549357 TDRD9Q8NDG6 1382 aaKnown RBP18.81■□□□□ 0.6
AC025575.2-201ENST00000549357 CUX1P39880 1505 aa18.8■□□□□ 0.6
AC025575.2-201ENST00000549357 FBLN2P98095 1184 aa18.75■□□□□ 0.59
AC025575.2-201ENST00000549357 WDR97A6NE52 1622 aa18.74■□□□□ 0.59
AC025575.2-201ENST00000549357 ARHGEF11O15085 1522 aa18.73■□□□□ 0.59
AC025575.2-201ENST00000549357 RIMBP3CA6NJZ7 1639 aa18.72■□□□□ 0.59
AC025575.2-201ENST00000549357 RIMBP3BA6NNM3 1639 aa18.72■□□□□ 0.59
AC025575.2-201ENST00000549357 RIMBP3Q9UFD9 1639 aa18.72■□□□□ 0.59
AC025575.2-201ENST00000549357 SNAPC4Q5SXM2 1469 aa18.69■□□□□ 0.58
AC025575.2-201ENST00000549357 GRIN2BQ13224 1484 aa18.68■□□□□ 0.58
AC025575.2-201ENST00000549357 MAGI1Q96QZ7 1491 aaPredicted RBP18.67■□□□□ 0.58
AC025575.2-201ENST00000549357 CHD1O14646 1710 aa18.66■□□□□ 0.58
AC025575.2-201ENST00000549357 CHMP7Q8WUX9 453 aaPredicted RBP18.65■□□□□ 0.58
AC025575.2-201ENST00000549357 ABCA10Q8WWZ4 1543 aa18.63■□□□□ 0.57
AC025575.2-201ENST00000549357 GAPVD1Q14C86 1478 aa18.62■□□□□ 0.57
AC025575.2-201ENST00000549357 CYB5RLQ6IPT4 315 aa18.61■□□□□ 0.57
AC025575.2-201ENST00000549357 SYNJ2O15056 1496 aa18.6■□□□□ 0.57
AC025575.2-201ENST00000549357 WRNQ14191 1432 aaPredicted RBP eCLIP18.59■□□□□ 0.57
AC025575.2-201ENST00000549357 ARAP1Q96P48 1450 aa18.55■□□□□ 0.56
AC025575.2-201ENST00000549357 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
AC025575.2-201ENST00000549357 CLASP1Q7Z460 1538 aa18.54■□□□□ 0.56
AC025575.2-201ENST00000549357 ABCA5Q8WWZ7 1642 aa18.54■□□□□ 0.56
AC025575.2-201ENST00000549357 TOP2BQ02880 1626 aa18.52■□□□□ 0.56
AC025575.2-201ENST00000549357 BIVM-ERCC5R4GMW8 1640 aa18.49■□□□□ 0.55
AC025575.2-201ENST00000549357 PBRM1Q86U86 1689 aa18.49■□□□□ 0.55
AC025575.2-201ENST00000549357 GRIN2AQ12879 1464 aa18.43■□□□□ 0.54
AC025575.2-201ENST00000549357 FHAD1B1AJZ9 1412 aa18.41■□□□□ 0.54
AC025575.2-201ENST00000549357 ADAMTS12P58397 1594 aa18.39■□□□□ 0.53
AC025575.2-201ENST00000549357 ERICH3Q5RHP9 1530 aa18.39■□□□□ 0.53
AC025575.2-201ENST00000549357 NUP160Q12769 1436 aa18.38■□□□□ 0.53
AC025575.2-201ENST00000549357 TRHP20396 242 aaPredicted RBP18.35■□□□□ 0.53
AC025575.2-201ENST00000549357 CEP170Q5SW79 1584 aa18.31■□□□□ 0.52
AC025575.2-201ENST00000549357 ERCC6L2Q5T890 1561 aa18.24■□□□□ 0.51
AC025575.2-201ENST00000549357 KIF27Q86VH2 1401 aa18.23■□□□□ 0.51
AC025575.2-201ENST00000549357 IGF1RP08069 1367 aa18.22■□□□□ 0.51
AC025575.2-201ENST00000549357 SHROOM2Q13796 1616 aa18.22■□□□□ 0.51
AC025575.2-201ENST00000549357 JPH4Q96JJ6 628 aa18.2■□□□□ 0.5
AC025575.2-201ENST00000549357 PRG4Q92954 1404 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms