RNA–Protein interactions for RNA: ENST00000549061.5

ERBB3-207, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-207ENST00000549061 NISCHQ9Y2I1 1504 aa36.86■■■■□ 3.49
ERBB3-207ENST00000549061 ABCC9O60706 1549 aa33.45■■■□□ 2.95
ERBB3-207ENST00000549061 CCDC180Q9P1Z9 1646 aa33.15■■■□□ 2.9
ERBB3-207ENST00000549061 DNAJC5BQ9UF47 199 aa31.78■■■□□ 2.68
ERBB3-207ENST00000549061 RB1CC1Q8TDY2 1594 aa31.69■■■□□ 2.66
ERBB3-207ENST00000549061 NACADO15069 1562 aa31.43■■■□□ 2.62
ERBB3-207ENST00000549061 DCAF8L2P0C7V8 631 aa31.19■■■□□ 2.58
ERBB3-207ENST00000549061 PABPN1Q86U42 306 aaKnown RBP eCLIP31.13■■■□□ 2.57
ERBB3-207ENST00000549061 UNC13AQ9UPW8 1703 aa31.03■■■□□ 2.56
ERBB3-207ENST00000549061 MYO15BQ96JP2 1530 aa30.95■■■□□ 2.55
ERBB3-207ENST00000549061 BICRAQ9NZM4 1560 aa30.87■■■□□ 2.53
ERBB3-207ENST00000549061 ZCCHC6Q5VYS8 1495 aaKnown RBP30.47■■■□□ 2.47
ERBB3-207ENST00000549061 DCAF1Q9Y4B6 1507 aa30.44■■■□□ 2.46
ERBB3-207ENST00000549061 SHROOM4Q9ULL8 1493 aa30.35■■■□□ 2.45
ERBB3-207ENST00000549061 CC2D2AQ9P2K1 1620 aa30.22■■■□□ 2.43
ERBB3-207ENST00000549061 SCRIBQ14160 1630 aa30.16■■■□□ 2.42
ERBB3-207ENST00000549061 CECR2Q9BXF3 1484 aa30.16■■■□□ 2.42
ERBB3-207ENST00000549061 EIF4G1Q04637 1599 aaKnown RBP30.08■■■□□ 2.41
ERBB3-207ENST00000549061 DNAJC5Q9H3Z4 198 aa29.35■■■□□ 2.29
ERBB3-207ENST00000549061 NCAPD3P42695 1498 aa29.08■■■□□ 2.25
ERBB3-207ENST00000549061 CUX2O14529 1486 aa28.94■■■□□ 2.22
ERBB3-207ENST00000549061 ATAD2BQ9ULI0 1458 aa28.92■■■□□ 2.22
ERBB3-207ENST00000549061 ERCC6Q03468 1493 aa28.84■■■□□ 2.21
ERBB3-207ENST00000549061 SMARCA4P51532 1647 aa28.79■■■□□ 2.2
ERBB3-207ENST00000549061 HMGXB3Q12766 1538 aa28.78■■■□□ 2.2
ERBB3-207ENST00000549061 SMARCA2P51531 1590 aa28.77■■■□□ 2.2
ERBB3-207ENST00000549061 NESP48681 1621 aa28.69■■■□□ 2.18
ERBB3-207ENST00000549061 BAZ1AQ9NRL2 1556 aaPredicted RBP28.59■■■□□ 2.17
ERBB3-207ENST00000549061 BAZ1BQ9UIG0 1483 aaKnown RBP28.57■■■□□ 2.16
ERBB3-207ENST00000549061 PEG3Q9GZU2 1588 aa28.55■■■□□ 2.16
ERBB3-207ENST00000549061 THOC2Q8NI27 1593 aaKnown RBP28.42■■■□□ 2.14
ERBB3-207ENST00000549061 MROH2BQ7Z745 1585 aa28.41■■■□□ 2.14
ERBB3-207ENST00000549061 LAMC3Q9Y6N6 1575 aa28.41■■■□□ 2.14
ERBB3-207ENST00000549061 KIF21AQ7Z4S6 1674 aa28.27■■■□□ 2.12
ERBB3-207ENST00000549061 PDS5BQ9NTI5 1447 aa28.25■■■□□ 2.11
ERBB3-207ENST00000549061 CADPSQ9ULU8 1353 aa28.16■■■□□ 2.1
ERBB3-207ENST00000549061 WIZO95785 1651 aa28.03■■■□□ 2.08
ERBB3-207ENST00000549061 MRC2Q9UBG0 1479 aa28.01■■■□□ 2.07
ERBB3-207ENST00000549061 WDR62O43379 1518 aa27.97■■■□□ 2.07
ERBB3-207ENST00000549061 TRIM41Q8WV44 630 aa27.83■■■□□ 2.05
ERBB3-207ENST00000549061 CEP164Q9UPV0 1460 aa27.83■■■□□ 2.04
ERBB3-207ENST00000549061 FANCD2Q9BXW9 1451 aa27.81■■■□□ 2.04
ERBB3-207ENST00000549061 CFTRP13569 1480 aa27.78■■■□□ 2.04
ERBB3-207ENST00000549061 RSF1Q96T23 1441 aaPredicted RBP27.74■■■□□ 2.03
ERBB3-207ENST00000549061 TOP2AP11388 1531 aaKnown RBP27.62■■■□□ 2.01
ERBB3-207ENST00000549061 URB2Q14146 1524 aaKnown RBP27.62■■■□□ 2.01
ERBB3-207ENST00000549061 OSCARQ8IYS5 282 aa27.62■■■□□ 2.01
ERBB3-207ENST00000549061 PRDM2Q13029 1718 aa27.41■■□□□ 1.98
ERBB3-207ENST00000549061 CCDC88BA6NC98 1476 aa27.38■■□□□ 1.97
ERBB3-207ENST00000549061 ZNF608Q9ULD9 1512 aaPredicted RBP27.34■■□□□ 1.97
ERBB3-207ENST00000549061 IFT140Q96RY7 1462 aa27.31■■□□□ 1.96
ERBB3-207ENST00000549061 TOPBP1Q92547 1522 aa27.26■■□□□ 1.95
ERBB3-207ENST00000549061 RIMBP3CA6NJZ7 1639 aa27.25■■□□□ 1.95
ERBB3-207ENST00000549061 RIMBP3BA6NNM3 1639 aa27.25■■□□□ 1.95
ERBB3-207ENST00000549061 RIMBP3Q9UFD9 1639 aa27.25■■□□□ 1.95
ERBB3-207ENST00000549061 ABCC8Q09428 1581 aa27.17■■□□□ 1.94
ERBB3-207ENST00000549061 ARHGEF11O15085 1522 aa27.14■■□□□ 1.94
ERBB3-207ENST00000549061 EIF4G3O43432 1585 aaKnown RBP27.11■■□□□ 1.93
ERBB3-207ENST00000549061 DNMBPQ6XZF7 1577 aa27.1■■□□□ 1.93
ERBB3-207ENST00000549061 TARBP1Q13395 1621 aaKnown RBP27.06■■□□□ 1.92
ERBB3-207ENST00000549061 AQRO60306 1485 aaKnown RBP eCLIP27.05■■□□□ 1.922e-8■■■■□ 20.9
ERBB3-207ENST00000549061 CYB5RLQ6IPT4 315 aa26.98■■□□□ 1.91
ERBB3-207ENST00000549061 CHD1O14646 1710 aa26.96■■□□□ 1.91
ERBB3-207ENST00000549061 POLA1P09884 1462 aaPredicted RBP26.96■■□□□ 1.91
ERBB3-207ENST00000549061 RAD54L2Q9Y4B4 1467 aa26.88■■□□□ 1.89
ERBB3-207ENST00000549061 FBLN2P98095 1184 aa26.87■■□□□ 1.89
ERBB3-207ENST00000549061 ARAP1Q96P48 1450 aa26.87■■□□□ 1.89
ERBB3-207ENST00000549061 TDRD9Q8NDG6 1382 aaKnown RBP26.84■■□□□ 1.89
ERBB3-207ENST00000549061 SOGA1O94964 1423 aa26.83■■□□□ 1.89
ERBB3-207ENST00000549061 FGD5Q6ZNL6 1462 aa26.74■■□□□ 1.87
ERBB3-207ENST00000549061 SNAPC4Q5SXM2 1469 aa26.71■■□□□ 1.87
ERBB3-207ENST00000549061 TRHP20396 242 aaPredicted RBP26.71■■□□□ 1.87
ERBB3-207ENST00000549061 WDR97A6NE52 1622 aa26.7■■□□□ 1.86
ERBB3-207ENST00000549061 CUX1P39880 1505 aa26.7■■□□□ 1.86
ERBB3-207ENST00000549061 CLASP1Q7Z460 1538 aa26.69■■□□□ 1.86
ERBB3-207ENST00000549061 CHMP7Q8WUX9 453 aaPredicted RBP26.65■■□□□ 1.86
ERBB3-207ENST00000549061 MAGI1Q96QZ7 1491 aaPredicted RBP26.64■■□□□ 1.86
ERBB3-207ENST00000549061 GRIN2BQ13224 1484 aa26.62■■□□□ 1.85
ERBB3-207ENST00000549061 SYNJ1O43426 1573 aa26.58■■□□□ 1.85
ERBB3-207ENST00000549061 SYNJ2O15056 1496 aa26.56■■□□□ 1.84
ERBB3-207ENST00000549061 GAPVD1Q14C86 1478 aa26.49■■□□□ 1.83
ERBB3-207ENST00000549061 PBRM1Q86U86 1689 aa26.46■■□□□ 1.83
ERBB3-207ENST00000549061 ABCA10Q8WWZ4 1543 aa26.44■■□□□ 1.82
ERBB3-207ENST00000549061 ABCA5Q8WWZ7 1642 aa26.4■■□□□ 1.82
ERBB3-207ENST00000549061 GRIN2AQ12879 1464 aa26.28■■□□□ 1.8
ERBB3-207ENST00000549061 ERCC6L2Q5T890 1561 aa26.27■■□□□ 1.8
ERBB3-207ENST00000549061 WRNQ14191 1432 aaPredicted RBP eCLIP26.25■■□□□ 1.79
ERBB3-207ENST00000549061 NUP160Q12769 1436 aa26.23■■□□□ 1.79
ERBB3-207ENST00000549061 SUPT5HO00267 1087 aaKnown RBP26.23■■□□□ 1.79
ERBB3-207ENST00000549061 CEP170Q5SW79 1584 aa26.2■■□□□ 1.79
ERBB3-207ENST00000549061 ADAMTS12P58397 1594 aa26.2■■□□□ 1.78
ERBB3-207ENST00000549061 TOP2BQ02880 1626 aa26.17■■□□□ 1.78
ERBB3-207ENST00000549061 BIVM-ERCC5R4GMW8 1640 aa26.17■■□□□ 1.78
ERBB3-207ENST00000549061 FHAD1B1AJZ9 1412 aa26.14■■□□□ 1.78
ERBB3-207ENST00000549061 SHROOM2Q13796 1616 aa26.14■■□□□ 1.78
ERBB3-207ENST00000549061 AEBP2Q6ZN18 517 aaPredicted RBP26.1■■□□□ 1.77
ERBB3-207ENST00000549061 ERICH3Q5RHP9 1530 aa26.09■■□□□ 1.77
ERBB3-207ENST00000549061 JPH4Q96JJ6 628 aa25.99■■□□□ 1.75
ERBB3-207ENST00000549061 PRG4Q92954 1404 aaPredicted RBP25.98■■□□□ 1.75
ERBB3-207ENST00000549061 KIF13AQ9H1H9 1805 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms