RNA–Protein interactions for RNA: ENST00000548993.5

LARP4-214, Transcript of La ribonucleoprotein domain family member 4, humanhuman

TSL 5

Gene LARP4, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4-214ENST00000548993 NISCHQ9Y2I1 1504 aa40.64■■■■■ 4.1
LARP4-214ENST00000548993 CCDC180Q9P1Z9 1646 aa36.4■■■■□ 3.42
LARP4-214ENST00000548993 ABCC9O60706 1549 aa36.29■■■■□ 3.4
LARP4-214ENST00000548993 RB1CC1Q8TDY2 1594 aa34.64■■■■□ 3.14
LARP4-214ENST00000548993 NACADO15069 1562 aa34.47■■■■□ 3.11
LARP4-214ENST00000548993 DCAF8L2P0C7V8 631 aa34.22■■■■□ 3.07
LARP4-214ENST00000548993 MYO15BQ96JP2 1530 aa34.1■■■■□ 3.05
LARP4-214ENST00000548993 DNAJC5BQ9UF47 199 aa34.09■■■■□ 3.05
LARP4-214ENST00000548993 PABPN1Q86U42 306 aaKnown RBP eCLIP33.84■■■■□ 3.01
LARP4-214ENST00000548993 UNC13AQ9UPW8 1703 aa33.73■■■□□ 2.99
LARP4-214ENST00000548993 ZCCHC6Q5VYS8 1495 aaKnown RBP33.67■■■□□ 2.98
LARP4-214ENST00000548993 DCAF1Q9Y4B6 1507 aa33.66■■■□□ 2.98
LARP4-214ENST00000548993 BICRAQ9NZM4 1560 aa33.61■■■□□ 2.97
LARP4-214ENST00000548993 SHROOM4Q9ULL8 1493 aa33.29■■■□□ 2.92
LARP4-214ENST00000548993 SCRIBQ14160 1630 aa33.06■■■□□ 2.88
LARP4-214ENST00000548993 CC2D2AQ9P2K1 1620 aa32.8■■■□□ 2.84
LARP4-214ENST00000548993 EIF4G1Q04637 1599 aaKnown RBP32.77■■■□□ 2.84
LARP4-214ENST00000548993 CECR2Q9BXF3 1484 aa32.74■■■□□ 2.83
LARP4-214ENST00000548993 NCAPD3P42695 1498 aa31.87■■■□□ 2.69
LARP4-214ENST00000548993 ATAD2BQ9ULI0 1458 aa31.72■■■□□ 2.67
LARP4-214ENST00000548993 SMARCA2P51531 1590 aa31.63■■■□□ 2.65
LARP4-214ENST00000548993 SMARCA4P51532 1647 aa31.63■■■□□ 2.65
LARP4-214ENST00000548993 HMGXB3Q12766 1538 aa31.56■■■□□ 2.64
LARP4-214ENST00000548993 BAZ1AQ9NRL2 1556 aaPredicted RBP31.53■■■□□ 2.64
LARP4-214ENST00000548993 PEG3Q9GZU2 1588 aa31.42■■■□□ 2.62
LARP4-214ENST00000548993 CUX2O14529 1486 aa31.36■■■□□ 2.61
LARP4-214ENST00000548993 BAZ1BQ9UIG0 1483 aaKnown RBP31.36■■■□□ 2.61
LARP4-214ENST00000548993 DNAJC5Q9H3Z4 198 aa31.34■■■□□ 2.61
LARP4-214ENST00000548993 ERCC6Q03468 1493 aa31.33■■■□□ 2.61
LARP4-214ENST00000548993 MROH2BQ7Z745 1585 aa31.26■■■□□ 2.6
LARP4-214ENST00000548993 NESP48681 1621 aa31.19■■■□□ 2.58
LARP4-214ENST00000548993 LAMC3Q9Y6N6 1575 aa31.06■■■□□ 2.56
LARP4-214ENST00000548993 PDS5BQ9NTI5 1447 aa30.93■■■□□ 2.54
LARP4-214ENST00000548993 CADPSQ9ULU8 1353 aa30.89■■■□□ 2.54
LARP4-214ENST00000548993 THOC2Q8NI27 1593 aaKnown RBP30.86■■■□□ 2.53
LARP4-214ENST00000548993 WIZO95785 1651 aa30.84■■■□□ 2.53
LARP4-214ENST00000548993 KIF21AQ7Z4S6 1674 aa30.74■■■□□ 2.51
LARP4-214ENST00000548993 RSF1Q96T23 1441 aaPredicted RBP30.7■■■□□ 2.5
LARP4-214ENST00000548993 MRC2Q9UBG0 1479 aa30.59■■■□□ 2.49
LARP4-214ENST00000548993 CFTRP13569 1480 aa30.53■■■□□ 2.48
LARP4-214ENST00000548993 TOP2AP11388 1531 aaKnown RBP30.52■■■□□ 2.48
LARP4-214ENST00000548993 WDR62O43379 1518 aa30.51■■■□□ 2.47
LARP4-214ENST00000548993 CEP164Q9UPV0 1460 aa30.47■■■□□ 2.47
LARP4-214ENST00000548993 FANCD2Q9BXW9 1451 aa30.45■■■□□ 2.47
LARP4-214ENST00000548993 CCDC88BA6NC98 1476 aa30.2■■■□□ 2.43
LARP4-214ENST00000548993 URB2Q14146 1524 aaKnown RBP30.18■■■□□ 2.42
LARP4-214ENST00000548993 PRDM2Q13029 1718 aa30.08■■■□□ 2.41
LARP4-214ENST00000548993 OSCARQ8IYS5 282 aa30■■■□□ 2.39
LARP4-214ENST00000548993 ABCC8Q09428 1581 aa29.93■■■□□ 2.38
LARP4-214ENST00000548993 IFT140Q96RY7 1462 aa29.91■■■□□ 2.38
LARP4-214ENST00000548993 TOPBP1Q92547 1522 aa29.88■■■□□ 2.37
LARP4-214ENST00000548993 TRIM41Q8WV44 630 aa29.82■■■□□ 2.36
LARP4-214ENST00000548993 ZNF608Q9ULD9 1512 aaPredicted RBP29.78■■■□□ 2.36
LARP4-214ENST00000548993 DNMBPQ6XZF7 1577 aa29.77■■■□□ 2.36
LARP4-214ENST00000548993 TARBP1Q13395 1621 aaKnown RBP29.6■■■□□ 2.33
LARP4-214ENST00000548993 POLA1P09884 1462 aaPredicted RBP29.58■■■□□ 2.33
LARP4-214ENST00000548993 EIF4G3O43432 1585 aaKnown RBP29.56■■■□□ 2.32
LARP4-214ENST00000548993 AQRO60306 1485 aaKnown RBP eCLIP29.55■■■□□ 2.324e-8■■■■■ 32.5
LARP4-214ENST00000548993 SOGA1O94964 1423 aa29.5■■■□□ 2.31
LARP4-214ENST00000548993 RAD54L2Q9Y4B4 1467 aa29.44■■■□□ 2.3
LARP4-214ENST00000548993 RIMBP3CA6NJZ7 1639 aa29.43■■■□□ 2.3
LARP4-214ENST00000548993 RIMBP3BA6NNM3 1639 aa29.43■■■□□ 2.3
LARP4-214ENST00000548993 RIMBP3Q9UFD9 1639 aa29.43■■■□□ 2.3
LARP4-214ENST00000548993 TDRD9Q8NDG6 1382 aaKnown RBP29.39■■■□□ 2.29
LARP4-214ENST00000548993 FGD5Q6ZNL6 1462 aa29.38■■■□□ 2.29
LARP4-214ENST00000548993 ARHGEF11O15085 1522 aa29.38■■■□□ 2.29
LARP4-214ENST00000548993 WDR97A6NE52 1622 aa29.38■■■□□ 2.29
LARP4-214ENST00000548993 CUX1P39880 1505 aa29.36■■■□□ 2.29
LARP4-214ENST00000548993 FBLN2P98095 1184 aa29.33■■■□□ 2.29
LARP4-214ENST00000548993 SUPT5HO00267 1087 aaKnown RBP29.32■■■□□ 2.28
LARP4-214ENST00000548993 CHD1O14646 1710 aa29.31■■■□□ 2.28
LARP4-214ENST00000548993 CYB5RLQ6IPT4 315 aa29.22■■■□□ 2.27
LARP4-214ENST00000548993 GRIN2BQ13224 1484 aa29.22■■■□□ 2.27
LARP4-214ENST00000548993 MAGI1Q96QZ7 1491 aaPredicted RBP29.22■■■□□ 2.27
LARP4-214ENST00000548993 SNAPC4Q5SXM2 1469 aa29.21■■■□□ 2.27
LARP4-214ENST00000548993 CHMP7Q8WUX9 453 aaPredicted RBP29.2■■■□□ 2.26
LARP4-214ENST00000548993 ABCA10Q8WWZ4 1543 aa29.12■■■□□ 2.25
LARP4-214ENST00000548993 SYNJ2O15056 1496 aa29.11■■■□□ 2.25
LARP4-214ENST00000548993 GAPVD1Q14C86 1478 aa29.11■■■□□ 2.25
LARP4-214ENST00000548993 ARAP1Q96P48 1450 aa29.1■■■□□ 2.25
LARP4-214ENST00000548993 CLASP1Q7Z460 1538 aa29.08■■■□□ 2.25
LARP4-214ENST00000548993 SYNJ1O43426 1573 aa29.06■■■□□ 2.24
LARP4-214ENST00000548993 WRNQ14191 1432 aaPredicted RBP eCLIP29.03■■■□□ 2.24
LARP4-214ENST00000548993 ABCA5Q8WWZ7 1642 aa28.99■■■□□ 2.23
LARP4-214ENST00000548993 PBRM1Q86U86 1689 aa28.97■■■□□ 2.23
LARP4-214ENST00000548993 TOP2BQ02880 1626 aa28.93■■■□□ 2.22
LARP4-214ENST00000548993 BIVM-ERCC5R4GMW8 1640 aa28.91■■■□□ 2.22
LARP4-214ENST00000548993 TRHP20396 242 aaPredicted RBP28.83■■■□□ 2.21
LARP4-214ENST00000548993 GRIN2AQ12879 1464 aa28.81■■■□□ 2.2
LARP4-214ENST00000548993 FHAD1B1AJZ9 1412 aa28.77■■■□□ 2.2
LARP4-214ENST00000548993 NUP160Q12769 1436 aa28.76■■■□□ 2.19
LARP4-214ENST00000548993 ERICH3Q5RHP9 1530 aa28.75■■■□□ 2.19
LARP4-214ENST00000548993 ADAMTS12P58397 1594 aa28.74■■■□□ 2.19
LARP4-214ENST00000548993 CEP170Q5SW79 1584 aa28.66■■■□□ 2.18
LARP4-214ENST00000548993 SHROOM2Q13796 1616 aa28.58■■■□□ 2.17
LARP4-214ENST00000548993 ERCC6L2Q5T890 1561 aa28.56■■■□□ 2.16
LARP4-214ENST00000548993 JPH4Q96JJ6 628 aa28.52■■■□□ 2.16
LARP4-214ENST00000548993 IGF1RP08069 1367 aa28.46■■■□□ 2.15
LARP4-214ENST00000548993 PRG4Q92954 1404 aaPredicted RBP28.44■■■□□ 2.14
LARP4-214ENST00000548993 KIF27Q86VH2 1401 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms