RNA–Protein interactions for RNA: ENST00000548568.5

RPLP0-213, Transcript of ribosomal protein lateral stalk subunit P0, humanhuman

TSL 1 (best)

Gene RPLP0, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0-213ENST00000548568 NISCHQ9Y2I1 1504 aa24.3■■□□□ 1.48
RPLP0-213ENST00000548568 AEBP2Q6ZN18 517 aaPredicted RBP22.84■■□□□ 1.25
RPLP0-213ENST00000548568 CCDC180Q9P1Z9 1646 aa21.6■■□□□ 1.05
RPLP0-213ENST00000548568 CHIC1Q5VXU3 224 aa21.5■■□□□ 1.03
RPLP0-213ENST00000548568 ABCC9O60706 1549 aa20.73■□□□□ 0.91
RPLP0-213ENST00000548568 ZCCHC6Q5VYS8 1495 aaKnown RBP20.33■□□□□ 0.85
RPLP0-213ENST00000548568 NACADO15069 1562 aa20.17■□□□□ 0.82
RPLP0-213ENST00000548568 DCAF1Q9Y4B6 1507 aa20.16■□□□□ 0.82
RPLP0-213ENST00000548568 MYO15BQ96JP2 1530 aa20.15■□□□□ 0.82
RPLP0-213ENST00000548568 RB1CC1Q8TDY2 1594 aa20.15■□□□□ 0.82
RPLP0-213ENST00000548568 DCAF8L2P0C7V8 631 aa20.05■□□□□ 0.8
RPLP0-213ENST00000548568 UNC13AQ9UPW8 1703 aa19.72■□□□□ 0.75
RPLP0-213ENST00000548568 SCRIBQ14160 1630 aa19.66■□□□□ 0.74
RPLP0-213ENST00000548568 BICRAQ9NZM4 1560 aa19.48■□□□□ 0.71
RPLP0-213ENST00000548568 SENP3Q9H4L4 574 aaPredicted RBP19.47■□□□□ 0.71
RPLP0-213ENST00000548568 SHROOM4Q9ULL8 1493 aa19.4■□□□□ 0.7
RPLP0-213ENST00000548568 PABPN1Q86U42 306 aaKnown RBP eCLIP19.33■□□□□ 0.68
RPLP0-213ENST00000548568 PHF23Q9BUL5 403 aaPredicted RBP19.25■□□□□ 0.67
RPLP0-213ENST00000548568 EIF4G1Q04637 1599 aaKnown RBP18.97■□□□□ 0.63
RPLP0-213ENST00000548568 BAZ1AQ9NRL2 1556 aaPredicted RBP18.86■□□□□ 0.61
RPLP0-213ENST00000548568 SMARCA4P51532 1647 aa18.85■□□□□ 0.61
RPLP0-213ENST00000548568 CECR2Q9BXF3 1484 aa18.84■□□□□ 0.61
RPLP0-213ENST00000548568 CC2D2AQ9P2K1 1620 aa18.81■□□□□ 0.6
RPLP0-213ENST00000548568 MROH2BQ7Z745 1585 aa18.72■□□□□ 0.59
RPLP0-213ENST00000548568 SMARCA2P51531 1590 aa18.67■□□□□ 0.58
RPLP0-213ENST00000548568 PEG3Q9GZU2 1588 aa18.66■□□□□ 0.58
RPLP0-213ENST00000548568 DNAJC5BQ9UF47 199 aa18.65■□□□□ 0.58
RPLP0-213ENST00000548568 ATAD2BQ9ULI0 1458 aa18.61■□□□□ 0.57
RPLP0-213ENST00000548568 RSF1Q96T23 1441 aaPredicted RBP18.57■□□□□ 0.56
RPLP0-213ENST00000548568 HMGXB3Q12766 1538 aa18.57■□□□□ 0.56
RPLP0-213ENST00000548568 WIZO95785 1651 aa18.55■□□□□ 0.56
RPLP0-213ENST00000548568 NCAPD3P42695 1498 aa18.55■□□□□ 0.56
RPLP0-213ENST00000548568 BAZ1BQ9UIG0 1483 aaKnown RBP18.51■□□□□ 0.55
RPLP0-213ENST00000548568 TOP2AP11388 1531 aaKnown RBP18.41■□□□□ 0.54
RPLP0-213ENST00000548568 SUPT5HO00267 1087 aaKnown RBP18.24■□□□□ 0.51
RPLP0-213ENST00000548568 FOXD1Q16676 465 aa18.21■□□□□ 0.51
RPLP0-213ENST00000548568 CCDC88BA6NC98 1476 aa18.11■□□□□ 0.49
RPLP0-213ENST00000548568 LAMC3Q9Y6N6 1575 aa18.09■□□□□ 0.49
RPLP0-213ENST00000548568 PRDM2Q13029 1718 aa18.03■□□□□ 0.48
RPLP0-213ENST00000548568 CADPSQ9ULU8 1353 aa18.01■□□□□ 0.47
RPLP0-213ENST00000548568 NESP48681 1621 aa18.01■□□□□ 0.47
RPLP0-213ENST00000548568 CFTRP13569 1480 aa17.99■□□□□ 0.47
RPLP0-213ENST00000548568 PDS5BQ9NTI5 1447 aa17.91■□□□□ 0.46
RPLP0-213ENST00000548568 KIF21AQ7Z4S6 1674 aa17.9■□□□□ 0.46
RPLP0-213ENST00000548568 ERCC6Q03468 1493 aa17.89■□□□□ 0.45
RPLP0-213ENST00000548568 FANCD2Q9BXW9 1451 aa17.84■□□□□ 0.45
RPLP0-213ENST00000548568 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
RPLP0-213ENST00000548568 THOC2Q8NI27 1593 aaKnown RBP17.78■□□□□ 0.44
RPLP0-213ENST00000548568 MRC2Q9UBG0 1479 aa17.74■□□□□ 0.43
RPLP0-213ENST00000548568 WDR62O43379 1518 aa17.69■□□□□ 0.42
RPLP0-213ENST00000548568 URB2Q14146 1524 aaKnown RBP17.64■□□□□ 0.41
RPLP0-213ENST00000548568 DNMBPQ6XZF7 1577 aa17.64■□□□□ 0.41
RPLP0-213ENST00000548568 ABCC8Q09428 1581 aa17.63■□□□□ 0.41
RPLP0-213ENST00000548568 CUX2O14529 1486 aa17.62■□□□□ 0.41
RPLP0-213ENST00000548568 TOPBP1Q92547 1522 aa17.59■□□□□ 0.41
RPLP0-213ENST00000548568 CUX1P39880 1505 aa17.55■□□□□ 0.4
RPLP0-213ENST00000548568 BIVM-ERCC5R4GMW8 1640 aa17.54■□□□□ 0.4
RPLP0-213ENST00000548568 WRNQ14191 1432 aaPredicted RBP eCLIP17.54■□□□□ 0.4
RPLP0-213ENST00000548568 TOP2BQ02880 1626 aa17.51■□□□□ 0.39
RPLP0-213ENST00000548568 SYNJ1O43426 1573 aa17.51■□□□□ 0.39
RPLP0-213ENST00000548568 POLA1P09884 1462 aaPredicted RBP17.46■□□□□ 0.39
RPLP0-213ENST00000548568 FGD5Q6ZNL6 1462 aa17.46■□□□□ 0.39
RPLP0-213ENST00000548568 IFT140Q96RY7 1462 aa17.44■□□□□ 0.38
RPLP0-213ENST00000548568 TARBP1Q13395 1621 aaKnown RBP17.41■□□□□ 0.38
RPLP0-213ENST00000548568 WDR97A6NE52 1622 aa17.39■□□□□ 0.37
RPLP0-213ENST00000548568 SOGA1O94964 1423 aa17.35■□□□□ 0.37
RPLP0-213ENST00000548568 RAD54L2Q9Y4B4 1467 aa17.33■□□□□ 0.37
RPLP0-213ENST00000548568 EIF4G3O43432 1585 aaKnown RBP17.32■□□□□ 0.36
RPLP0-213ENST00000548568 ABCA10Q8WWZ4 1543 aa17.31■□□□□ 0.36
RPLP0-213ENST00000548568 ZNF608Q9ULD9 1512 aaPredicted RBP17.28■□□□□ 0.36
RPLP0-213ENST00000548568 ABCA5Q8WWZ7 1642 aa17.27■□□□□ 0.36
RPLP0-213ENST00000548568 TRIM41Q8WV44 630 aa17.24■□□□□ 0.35
RPLP0-213ENST00000548568 PBRM1Q86U86 1689 aa17.23■□□□□ 0.35
RPLP0-213ENST00000548568 AQRO60306 1485 aaKnown RBP eCLIP17.19■□□□□ 0.342e-7■■■■■ 90
RPLP0-213ENST00000548568 GAPVD1Q14C86 1478 aa17.19■□□□□ 0.34
RPLP0-213ENST00000548568 TDRD9Q8NDG6 1382 aaKnown RBP17.19■□□□□ 0.34
RPLP0-213ENST00000548568 GRIN2BQ13224 1484 aa17.17■□□□□ 0.34
RPLP0-213ENST00000548568 KIF27Q86VH2 1401 aa17.16■□□□□ 0.34
RPLP0-213ENST00000548568 ERICH3Q5RHP9 1530 aa17.13■□□□□ 0.33
RPLP0-213ENST00000548568 MAGI1Q96QZ7 1491 aaPredicted RBP17.12■□□□□ 0.33
RPLP0-213ENST00000548568 SNAPC4Q5SXM2 1469 aa17.11■□□□□ 0.33
RPLP0-213ENST00000548568 ADAMTS12P58397 1594 aa17.09■□□□□ 0.33
RPLP0-213ENST00000548568 CUL7Q14999 1698 aa17.08■□□□□ 0.32
RPLP0-213ENST00000548568 MSH5O43196 834 aa17.08■□□□□ 0.32
RPLP0-213ENST00000548568 PLPPR3Q6T4P5 718 aa17.08■□□□□ 0.32
RPLP0-213ENST00000548568 CHD1O14646 1710 aa17.06■□□□□ 0.32
RPLP0-213ENST00000548568 EEA1Q15075 1411 aa17.04■□□□□ 0.32
RPLP0-213ENST00000548568 SYNJ2O15056 1496 aa17.03■□□□□ 0.32
RPLP0-213ENST00000548568 RUSC2Q8N2Y8 1516 aa17.01■□□□□ 0.31
RPLP0-213ENST00000548568 POTEDQ86YR6 584 aa17.01■□□□□ 0.31
RPLP0-213ENST00000548568 FHAD1B1AJZ9 1412 aa17.01■□□□□ 0.31
RPLP0-213ENST00000548568 IGF1RP08069 1367 aa16.97■□□□□ 0.31
RPLP0-213ENST00000548568 GRIN2AQ12879 1464 aa16.95■□□□□ 0.3
RPLP0-213ENST00000548568 PIAS4Q8N2W9 510 aaPredicted RBP16.94■□□□□ 0.3
RPLP0-213ENST00000548568 CHMP7Q8WUX9 453 aaPredicted RBP16.92■□□□□ 0.3
RPLP0-213ENST00000548568 PPP6R1Q9UPN7 881 aa16.92■□□□□ 0.3
RPLP0-213ENST00000548568 CARMIL1Q5VZK9 1371 aa16.91■□□□□ 0.3
RPLP0-213ENST00000548568 FBLN2P98095 1184 aa16.91■□□□□ 0.3
RPLP0-213ENST00000548568 PRXQ9BXM0 1461 aa16.88■□□□□ 0.29
RPLP0-213ENST00000548568 RAPGEF2Q9Y4G8 1499 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms