RNA–Protein interactions for RNA: ENST00000548247.1

RACGAP1-211, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 564 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-211ENST00000548247 NISCHQ9Y2I1 1504 aa33.72■■■□□ 2.99
RACGAP1-211ENST00000548247 ABCC9O60706 1549 aa30.98■■■□□ 2.55
RACGAP1-211ENST00000548247 CCDC180Q9P1Z9 1646 aa30.44■■■□□ 2.46
RACGAP1-211ENST00000548247 DNAJC5BQ9UF47 199 aa29.57■■■□□ 2.32
RACGAP1-211ENST00000548247 RB1CC1Q8TDY2 1594 aa29.22■■■□□ 2.27
RACGAP1-211ENST00000548247 NACADO15069 1562 aa28.88■■■□□ 2.21
RACGAP1-211ENST00000548247 PABPN1Q86U42 306 aaKnown RBP eCLIP28.79■■■□□ 2.2
RACGAP1-211ENST00000548247 DCAF8L2P0C7V8 631 aa28.69■■■□□ 2.18
RACGAP1-211ENST00000548247 UNC13AQ9UPW8 1703 aa28.6■■■□□ 2.17
RACGAP1-211ENST00000548247 BICRAQ9NZM4 1560 aa28.45■■■□□ 2.14
RACGAP1-211ENST00000548247 MYO15BQ96JP2 1530 aa28.33■■■□□ 2.13
RACGAP1-211ENST00000548247 CC2D2AQ9P2K1 1620 aa27.95■■■□□ 2.06
RACGAP1-211ENST00000548247 CECR2Q9BXF3 1484 aa27.94■■■□□ 2.06
RACGAP1-211ENST00000548247 SHROOM4Q9ULL8 1493 aa27.92■■■□□ 2.06
RACGAP1-211ENST00000548247 ZCCHC6Q5VYS8 1495 aaKnown RBP27.83■■■□□ 2.05
RACGAP1-211ENST00000548247 DCAF1Q9Y4B6 1507 aa27.79■■■□□ 2.04
RACGAP1-211ENST00000548247 EIF4G1Q04637 1599 aaKnown RBP27.76■■■□□ 2.03
RACGAP1-211ENST00000548247 SCRIBQ14160 1630 aa27.74■■■□□ 2.03
RACGAP1-211ENST00000548247 DNAJC5Q9H3Z4 198 aa27.45■■□□□ 1.98
RACGAP1-211ENST00000548247 CUX2O14529 1486 aa26.85■■□□□ 1.89
RACGAP1-211ENST00000548247 ERCC6Q03468 1493 aa26.74■■□□□ 1.87
RACGAP1-211ENST00000548247 NCAPD3P42695 1498 aa26.71■■□□□ 1.87
RACGAP1-211ENST00000548247 ATAD2BQ9ULI0 1458 aa26.56■■□□□ 1.84
RACGAP1-211ENST00000548247 NESP48681 1621 aa26.5■■□□□ 1.83
RACGAP1-211ENST00000548247 HMGXB3Q12766 1538 aa26.44■■□□□ 1.82
RACGAP1-211ENST00000548247 SMARCA2P51531 1590 aa26.42■■□□□ 1.82
RACGAP1-211ENST00000548247 SMARCA4P51532 1647 aa26.41■■□□□ 1.82
RACGAP1-211ENST00000548247 THOC2Q8NI27 1593 aaKnown RBP26.29■■□□□ 1.8
RACGAP1-211ENST00000548247 BAZ1BQ9UIG0 1483 aaKnown RBP26.26■■□□□ 1.79
RACGAP1-211ENST00000548247 BAZ1AQ9NRL2 1556 aaPredicted RBP26.18■■□□□ 1.78
RACGAP1-211ENST00000548247 LAMC3Q9Y6N6 1575 aa26.16■■□□□ 1.78
RACGAP1-211ENST00000548247 PEG3Q9GZU2 1588 aa26.14■■□□□ 1.78
RACGAP1-211ENST00000548247 KIF21AQ7Z4S6 1674 aa26.11■■□□□ 1.77
RACGAP1-211ENST00000548247 TRIM41Q8WV44 630 aa26.04■■□□□ 1.76
RACGAP1-211ENST00000548247 PDS5BQ9NTI5 1447 aa26.03■■□□□ 1.76
RACGAP1-211ENST00000548247 MROH2BQ7Z745 1585 aa26■■□□□ 1.75
RACGAP1-211ENST00000548247 CADPSQ9ULU8 1353 aa25.87■■□□□ 1.73
RACGAP1-211ENST00000548247 MRC2Q9UBG0 1479 aa25.85■■□□□ 1.73
RACGAP1-211ENST00000548247 WDR62O43379 1518 aa25.8■■□□□ 1.72
RACGAP1-211ENST00000548247 WIZO95785 1651 aa25.67■■□□□ 1.7
RACGAP1-211ENST00000548247 CEP164Q9UPV0 1460 aa25.63■■□□□ 1.69
RACGAP1-211ENST00000548247 FANCD2Q9BXW9 1451 aa25.58■■□□□ 1.69
RACGAP1-211ENST00000548247 OSCARQ8IYS5 282 aa25.57■■□□□ 1.68
RACGAP1-211ENST00000548247 CFTRP13569 1480 aa25.47■■□□□ 1.67
RACGAP1-211ENST00000548247 URB2Q14146 1524 aaKnown RBP25.43■■□□□ 1.66
RACGAP1-211ENST00000548247 RIMBP3CA6NJZ7 1639 aa25.31■■□□□ 1.64
RACGAP1-211ENST00000548247 RIMBP3BA6NNM3 1639 aa25.31■■□□□ 1.64
RACGAP1-211ENST00000548247 RIMBP3Q9UFD9 1639 aa25.31■■□□□ 1.64
RACGAP1-211ENST00000548247 RSF1Q96T23 1441 aaPredicted RBP25.28■■□□□ 1.64
RACGAP1-211ENST00000548247 TOP2AP11388 1531 aaKnown RBP25.27■■□□□ 1.64
RACGAP1-211ENST00000548247 ZNF608Q9ULD9 1512 aaPredicted RBP25.21■■□□□ 1.63
RACGAP1-211ENST00000548247 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
RACGAP1-211ENST00000548247 IFT140Q96RY7 1462 aa25.15■■□□□ 1.62
RACGAP1-211ENST00000548247 PRDM2Q13029 1718 aa25.15■■□□□ 1.62
RACGAP1-211ENST00000548247 TOPBP1Q92547 1522 aa25.04■■□□□ 1.6
RACGAP1-211ENST00000548247 CYB5RLQ6IPT4 315 aa25.03■■□□□ 1.6
RACGAP1-211ENST00000548247 CCDC88BA6NC98 1476 aa25.02■■□□□ 1.6
RACGAP1-211ENST00000548247 EIF4G3O43432 1585 aaKnown RBP25.01■■□□□ 1.59
RACGAP1-211ENST00000548247 CHD1O14646 1710 aa24.92■■□□□ 1.58
RACGAP1-211ENST00000548247 AQRO60306 1485 aaKnown RBP eCLIP24.91■■□□□ 1.58
RACGAP1-211ENST00000548247 ARAP1Q96P48 1450 aa24.9■■□□□ 1.58
RACGAP1-211ENST00000548247 ABCC8Q09428 1581 aa24.9■■□□□ 1.58
RACGAP1-211ENST00000548247 DNMBPQ6XZF7 1577 aa24.89■■□□□ 1.58
RACGAP1-211ENST00000548247 TRHP20396 242 aaPredicted RBP24.89■■□□□ 1.58
RACGAP1-211ENST00000548247 TARBP1Q13395 1621 aaKnown RBP24.87■■□□□ 1.57
RACGAP1-211ENST00000548247 FBLN2P98095 1184 aa24.83■■□□□ 1.57
RACGAP1-211ENST00000548247 POLA1P09884 1462 aaPredicted RBP24.77■■□□□ 1.56
RACGAP1-211ENST00000548247 RAD54L2Q9Y4B4 1467 aa24.71■■□□□ 1.55
RACGAP1-211ENST00000548247 TDRD9Q8NDG6 1382 aaKnown RBP24.68■■□□□ 1.54
RACGAP1-211ENST00000548247 SOGA1O94964 1423 aa24.63■■□□□ 1.53
RACGAP1-211ENST00000548247 CLASP1Q7Z460 1538 aa24.62■■□□□ 1.53
RACGAP1-211ENST00000548247 SNAPC4Q5SXM2 1469 aa24.62■■□□□ 1.53
RACGAP1-211ENST00000548247 CHMP7Q8WUX9 453 aaPredicted RBP24.55■■□□□ 1.52
RACGAP1-211ENST00000548247 FGD5Q6ZNL6 1462 aa24.53■■□□□ 1.52
RACGAP1-211ENST00000548247 SYNJ1O43426 1573 aa24.53■■□□□ 1.52
RACGAP1-211ENST00000548247 WDR97A6NE52 1622 aa24.52■■□□□ 1.52
RACGAP1-211ENST00000548247 AEBP2Q6ZN18 517 aaPredicted RBP24.5■■□□□ 1.51
RACGAP1-211ENST00000548247 MAGI1Q96QZ7 1491 aaPredicted RBP24.5■■□□□ 1.51
RACGAP1-211ENST00000548247 GRIN2BQ13224 1484 aa24.46■■□□□ 1.51
RACGAP1-211ENST00000548247 CUX1P39880 1505 aa24.45■■□□□ 1.5
RACGAP1-211ENST00000548247 SYNJ2O15056 1496 aa24.45■■□□□ 1.5
RACGAP1-211ENST00000548247 GAPVD1Q14C86 1478 aa24.39■■□□□ 1.5
RACGAP1-211ENST00000548247 PBRM1Q86U86 1689 aa24.34■■□□□ 1.49
RACGAP1-211ENST00000548247 ERCC6L2Q5T890 1561 aa24.25■■□□□ 1.47
RACGAP1-211ENST00000548247 ABCA5Q8WWZ7 1642 aa24.23■■□□□ 1.47
RACGAP1-211ENST00000548247 ABCA10Q8WWZ4 1543 aa24.21■■□□□ 1.47
RACGAP1-211ENST00000548247 GRIN2AQ12879 1464 aa24.15■■□□□ 1.46
RACGAP1-211ENST00000548247 CEP170Q5SW79 1584 aa24.13■■□□□ 1.45
RACGAP1-211ENST00000548247 NUP160Q12769 1436 aa24.1■■□□□ 1.45
RACGAP1-211ENST00000548247 ADAMTS12P58397 1594 aa24.08■■□□□ 1.44
RACGAP1-211ENST00000548247 SHROOM2Q13796 1616 aa24.05■■□□□ 1.44
RACGAP1-211ENST00000548247 KIF13AQ9H1H9 1805 aa24.02■■□□□ 1.44
RACGAP1-211ENST00000548247 WRNQ14191 1432 aaPredicted RBP eCLIP24.01■■□□□ 1.43
RACGAP1-211ENST00000548247 FHAD1B1AJZ9 1412 aa23.99■■□□□ 1.43
RACGAP1-211ENST00000548247 PRG4Q92954 1404 aaPredicted RBP23.92■■□□□ 1.42
RACGAP1-211ENST00000548247 BIVM-ERCC5R4GMW8 1640 aa23.91■■□□□ 1.42
RACGAP1-211ENST00000548247 TOP2BQ02880 1626 aa23.9■■□□□ 1.42
RACGAP1-211ENST00000548247 ERICH3Q5RHP9 1530 aa23.89■■□□□ 1.41
RACGAP1-211ENST00000548247 JPH4Q96JJ6 628 aa23.86■■□□□ 1.41
RACGAP1-211ENST00000548247 FAM69CQ0P6D2 419 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms