RNA–Protein interactions for RNA: ENST00000548135.1

AC055736.1-201, humanhuman

TSL 3 BASIC

Gene AC055736.1, Length 629 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055736.1-201ENST00000548135 NISCHQ9Y2I1 1504 aa20.57■□□□□ 0.88
AC055736.1-201ENST00000548135 ABCC9O60706 1549 aa18.7■□□□□ 0.58
AC055736.1-201ENST00000548135 CCDC180Q9P1Z9 1646 aa18.56■□□□□ 0.56
AC055736.1-201ENST00000548135 RB1CC1Q8TDY2 1594 aa17.73■□□□□ 0.43
AC055736.1-201ENST00000548135 DNAJC5BQ9UF47 199 aa17.69■□□□□ 0.42
AC055736.1-201ENST00000548135 NACADO15069 1562 aa17.56■□□□□ 0.4
AC055736.1-201ENST00000548135 DCAF8L2P0C7V8 631 aa17.46■□□□□ 0.39
AC055736.1-201ENST00000548135 PABPN1Q86U42 306 aaKnown RBP eCLIP17.38■□□□□ 0.37
AC055736.1-201ENST00000548135 UNC13AQ9UPW8 1703 aa17.38■□□□□ 0.37
AC055736.1-201ENST00000548135 MYO15BQ96JP2 1530 aa17.24■□□□□ 0.35
AC055736.1-201ENST00000548135 BICRAQ9NZM4 1560 aa17.22■□□□□ 0.35
AC055736.1-201ENST00000548135 ZCCHC6Q5VYS8 1495 aaKnown RBP16.99■□□□□ 0.31
AC055736.1-201ENST00000548135 DCAF1Q9Y4B6 1507 aa16.96■□□□□ 0.31
AC055736.1-201ENST00000548135 SHROOM4Q9ULL8 1493 aa16.94■□□□□ 0.3
AC055736.1-201ENST00000548135 SCRIBQ14160 1630 aa16.89■□□□□ 0.29
AC055736.1-201ENST00000548135 CC2D2AQ9P2K1 1620 aa16.89■□□□□ 0.29
AC055736.1-201ENST00000548135 CECR2Q9BXF3 1484 aa16.86■□□□□ 0.29
AC055736.1-201ENST00000548135 EIF4G1Q04637 1599 aaKnown RBP16.81■□□□□ 0.28
AC055736.1-201ENST00000548135 DNAJC5Q9H3Z4 198 aa16.36■□□□□ 0.21
AC055736.1-201ENST00000548135 NCAPD3P42695 1498 aa16.2■□□□□ 0.18
AC055736.1-201ENST00000548135 CUX2O14529 1486 aa16.16■□□□□ 0.18
AC055736.1-201ENST00000548135 ERCC6Q03468 1493 aa16.16■□□□□ 0.18
AC055736.1-201ENST00000548135 ATAD2BQ9ULI0 1458 aa16.12■□□□□ 0.17
AC055736.1-201ENST00000548135 SMARCA2P51531 1590 aa16.09■□□□□ 0.17
AC055736.1-201ENST00000548135 SMARCA4P51532 1647 aa16.09■□□□□ 0.17
AC055736.1-201ENST00000548135 HMGXB3Q12766 1538 aa16.07■□□□□ 0.16
AC055736.1-201ENST00000548135 NESP48681 1621 aa16.02■□□□□ 0.16
AC055736.1-201ENST00000548135 BAZ1AQ9NRL2 1556 aaPredicted RBP15.98■□□□□ 0.15
AC055736.1-201ENST00000548135 BAZ1BQ9UIG0 1483 aaKnown RBP15.97■□□□□ 0.15
AC055736.1-201ENST00000548135 PEG3Q9GZU2 1588 aa15.92■□□□□ 0.14
AC055736.1-201ENST00000548135 THOC2Q8NI27 1593 aaKnown RBP15.89■□□□□ 0.13
AC055736.1-201ENST00000548135 LAMC3Q9Y6N6 1575 aa15.87■□□□□ 0.13
AC055736.1-201ENST00000548135 MROH2BQ7Z745 1585 aa15.85■□□□□ 0.13
AC055736.1-201ENST00000548135 KIF21AQ7Z4S6 1674 aa15.84■□□□□ 0.13
AC055736.1-201ENST00000548135 PDS5BQ9NTI5 1447 aa15.78■□□□□ 0.12
AC055736.1-201ENST00000548135 CADPSQ9ULU8 1353 aa15.7■□□□□ 0.1
AC055736.1-201ENST00000548135 WIZO95785 1651 aa15.67■□□□□ 0.1
AC055736.1-201ENST00000548135 MRC2Q9UBG0 1479 aa15.66■□□□□ 0.1
AC055736.1-201ENST00000548135 WDR62O43379 1518 aa15.63■□□□□ 0.09
AC055736.1-201ENST00000548135 TRIM41Q8WV44 630 aa15.59■□□□□ 0.09
AC055736.1-201ENST00000548135 CEP164Q9UPV0 1460 aa15.56■□□□□ 0.08
AC055736.1-201ENST00000548135 FANCD2Q9BXW9 1451 aa15.52■□□□□ 0.08
AC055736.1-201ENST00000548135 CFTRP13569 1480 aa15.49■□□□□ 0.07
AC055736.1-201ENST00000548135 RSF1Q96T23 1441 aaPredicted RBP15.45■□□□□ 0.06
AC055736.1-201ENST00000548135 TOP2AP11388 1531 aaKnown RBP15.44■□□□□ 0.06
AC055736.1-201ENST00000548135 OSCARQ8IYS5 282 aa15.42■□□□□ 0.06
AC055736.1-201ENST00000548135 URB2Q14146 1524 aaKnown RBP15.42■□□□□ 0.06
AC055736.1-201ENST00000548135 PRDM2Q13029 1718 aa15.38■□□□□ 0.05
AC055736.1-201ENST00000548135 CCDC88BA6NC98 1476 aa15.27■□□□□ 0.04
AC055736.1-201ENST00000548135 ZNF608Q9ULD9 1512 aaPredicted RBP15.26■□□□□ 0.03
AC055736.1-201ENST00000548135 IFT140Q96RY7 1462 aa15.26■□□□□ 0.03
AC055736.1-201ENST00000548135 RIMBP3CA6NJZ7 1639 aa15.25■□□□□ 0.03
AC055736.1-201ENST00000548135 RIMBP3BA6NNM3 1639 aa15.25■□□□□ 0.03
AC055736.1-201ENST00000548135 RIMBP3Q9UFD9 1639 aa15.25■□□□□ 0.03
AC055736.1-201ENST00000548135 TOPBP1Q92547 1522 aa15.22■□□□□ 0.03
AC055736.1-201ENST00000548135 EIF4G3O43432 1585 aaKnown RBP15.18■□□□□ 0.02
AC055736.1-201ENST00000548135 ABCC8Q09428 1581 aa15.18■□□□□ 0.02
AC055736.1-201ENST00000548135 ARHGEF11O15085 1522 aa15.17■□□□□ 0.02
AC055736.1-201ENST00000548135 DNMBPQ6XZF7 1577 aa15.15■□□□□ 0.02
AC055736.1-201ENST00000548135 CHD1O14646 1710 aa15.13■□□□□ 0.01
AC055736.1-201ENST00000548135 TARBP1Q13395 1621 aaKnown RBP15.11■□□□□ 0.01
AC055736.1-201ENST00000548135 AQRO60306 1485 aaKnown RBP eCLIP15.1■□□□□ 0.01
AC055736.1-201ENST00000548135 CYB5RLQ6IPT4 315 aa15.08■□□□□ 0
AC055736.1-201ENST00000548135 FBLN2P98095 1184 aa15.05■□□□□ -0
AC055736.1-201ENST00000548135 POLA1P09884 1462 aaPredicted RBP15.05■□□□□ -0
AC055736.1-201ENST00000548135 RAD54L2Q9Y4B4 1467 aa15.01□□□□□ -0.01
AC055736.1-201ENST00000548135 ARAP1Q96P48 1450 aa15□□□□□ -0.01
AC055736.1-201ENST00000548135 SOGA1O94964 1423 aa14.99□□□□□ -0.01
AC055736.1-201ENST00000548135 TDRD9Q8NDG6 1382 aaKnown RBP14.98□□□□□ -0.01
AC055736.1-201ENST00000548135 TRHP20396 242 aaPredicted RBP14.97□□□□□ -0.01
AC055736.1-201ENST00000548135 FGD5Q6ZNL6 1462 aa14.94□□□□□ -0.02
AC055736.1-201ENST00000548135 WDR97A6NE52 1622 aa14.93□□□□□ -0.02
AC055736.1-201ENST00000548135 SNAPC4Q5SXM2 1469 aa14.93□□□□□ -0.02
AC055736.1-201ENST00000548135 CHMP7Q8WUX9 453 aaPredicted RBP14.9□□□□□ -0.02
AC055736.1-201ENST00000548135 CUX1P39880 1505 aa14.9□□□□□ -0.02
AC055736.1-201ENST00000548135 CLASP1Q7Z460 1538 aa14.9□□□□□ -0.02
AC055736.1-201ENST00000548135 SYNJ1O43426 1573 aa14.9□□□□□ -0.02
AC055736.1-201ENST00000548135 MAGI1Q96QZ7 1491 aaPredicted RBP14.89□□□□□ -0.03
AC055736.1-201ENST00000548135 GRIN2BQ13224 1484 aa14.88□□□□□ -0.03
AC055736.1-201ENST00000548135 SYNJ2O15056 1496 aa14.84□□□□□ -0.03
AC055736.1-201ENST00000548135 PBRM1Q86U86 1689 aa14.84□□□□□ -0.03
AC055736.1-201ENST00000548135 GAPVD1Q14C86 1478 aa14.8□□□□□ -0.04
AC055736.1-201ENST00000548135 ABCA5Q8WWZ7 1642 aa14.76□□□□□ -0.05
AC055736.1-201ENST00000548135 ABCA10Q8WWZ4 1543 aa14.75□□□□□ -0.05
AC055736.1-201ENST00000548135 GRIN2AQ12879 1464 aa14.68□□□□□ -0.06
AC055736.1-201ENST00000548135 SUPT5HO00267 1087 aaKnown RBP14.67□□□□□ -0.06
AC055736.1-201ENST00000548135 ERCC6L2Q5T890 1561 aa14.67□□□□□ -0.06
AC055736.1-201ENST00000548135 WRNQ14191 1432 aaPredicted RBP eCLIP14.66□□□□□ -0.06
AC055736.1-201ENST00000548135 AEBP2Q6ZN18 517 aaPredicted RBP14.66□□□□□ -0.06
AC055736.1-201ENST00000548135 ADAMTS12P58397 1594 aa14.65□□□□□ -0.06
AC055736.1-201ENST00000548135 CEP170Q5SW79 1584 aa14.64□□□□□ -0.07
AC055736.1-201ENST00000548135 BIVM-ERCC5R4GMW8 1640 aa14.63□□□□□ -0.07
AC055736.1-201ENST00000548135 TOP2BQ02880 1626 aa14.63□□□□□ -0.07
AC055736.1-201ENST00000548135 NUP160Q12769 1436 aa14.62□□□□□ -0.07
AC055736.1-201ENST00000548135 SHROOM2Q13796 1616 aa14.61□□□□□ -0.07
AC055736.1-201ENST00000548135 FHAD1B1AJZ9 1412 aa14.6□□□□□ -0.07
AC055736.1-201ENST00000548135 ERICH3Q5RHP9 1530 aa14.57□□□□□ -0.08
AC055736.1-201ENST00000548135 KIF13AQ9H1H9 1805 aa14.53□□□□□ -0.08
AC055736.1-201ENST00000548135 PRG4Q92954 1404 aaPredicted RBP14.52□□□□□ -0.08
AC055736.1-201ENST00000548135 JPH4Q96JJ6 628 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms