RNA–Protein interactions for RNA: ENST00000547833.5

EEA1-203, Transcript of early endosome antigen 1, humanhuman

TSL 3

Gene EEA1, Length 661 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEA1-203ENST00000547833 NISCHQ9Y2I1 1504 aa44.81■■■■■ 4.76
EEA1-203ENST00000547833 CCDC180Q9P1Z9 1646 aa39.76■■■■□ 3.96
EEA1-203ENST00000547833 ABCC9O60706 1549 aa38.42■■■■□ 3.74
EEA1-203ENST00000547833 ZCCHC6Q5VYS8 1495 aaKnown RBP37.41■■■■□ 3.58
EEA1-203ENST00000547833 DCAF8L2P0C7V8 631 aa37.28■■■■□ 3.56
EEA1-203ENST00000547833 NACADO15069 1562 aa37.26■■■■□ 3.56
EEA1-203ENST00000547833 RB1CC1Q8TDY2 1594 aa37.22■■■■□ 3.55
EEA1-203ENST00000547833 MYO15BQ96JP2 1530 aa37.15■■■■□ 3.54
EEA1-203ENST00000547833 DCAF1Q9Y4B6 1507 aa37.14■■■■□ 3.54
EEA1-203ENST00000547833 UNC13AQ9UPW8 1703 aa36.37■■■■□ 3.41
EEA1-203ENST00000547833 SCRIBQ14160 1630 aa36.25■■■■□ 3.39
EEA1-203ENST00000547833 BICRAQ9NZM4 1560 aa35.98■■■■□ 3.35
EEA1-203ENST00000547833 PABPN1Q86U42 306 aaKnown RBP eCLIP35.92■■■■□ 3.34
EEA1-203ENST00000547833 SHROOM4Q9ULL8 1493 aa35.75■■■■□ 3.31
EEA1-203ENST00000547833 EIF4G1Q04637 1599 aaKnown RBP35.04■■■■□ 3.2
EEA1-203ENST00000547833 CC2D2AQ9P2K1 1620 aa34.81■■■■□ 3.16
EEA1-203ENST00000547833 CECR2Q9BXF3 1484 aa34.79■■■■□ 3.16
EEA1-203ENST00000547833 BAZ1AQ9NRL2 1556 aaPredicted RBP34.76■■■■□ 3.16
EEA1-203ENST00000547833 DNAJC5BQ9UF47 199 aa34.76■■■■□ 3.16
EEA1-203ENST00000547833 SMARCA4P51532 1647 aa34.72■■■■□ 3.15
EEA1-203ENST00000547833 MROH2BQ7Z745 1585 aa34.5■■■■□ 3.11
EEA1-203ENST00000547833 SMARCA2P51531 1590 aa34.45■■■■□ 3.1
EEA1-203ENST00000547833 ATAD2BQ9ULI0 1458 aa34.39■■■■□ 3.1
EEA1-203ENST00000547833 PEG3Q9GZU2 1588 aa34.36■■■■□ 3.09
EEA1-203ENST00000547833 NCAPD3P42695 1498 aa34.32■■■■□ 3.08
EEA1-203ENST00000547833 RSF1Q96T23 1441 aaPredicted RBP34.25■■■■□ 3.07
EEA1-203ENST00000547833 HMGXB3Q12766 1538 aa34.24■■■■□ 3.07
EEA1-203ENST00000547833 WIZO95785 1651 aa34.2■■■■□ 3.07
EEA1-203ENST00000547833 BAZ1BQ9UIG0 1483 aaKnown RBP34.18■■■■□ 3.06
EEA1-203ENST00000547833 TOP2AP11388 1531 aaKnown RBP33.89■■■■□ 3.02
EEA1-203ENST00000547833 SUPT5HO00267 1087 aaKnown RBP33.7■■■□□ 2.99
EEA1-203ENST00000547833 CCDC88BA6NC98 1476 aa33.43■■■□□ 2.94
EEA1-203ENST00000547833 LAMC3Q9Y6N6 1575 aa33.42■■■□□ 2.94
EEA1-203ENST00000547833 CADPSQ9ULU8 1353 aa33.34■■■□□ 2.93
EEA1-203ENST00000547833 NESP48681 1621 aa33.32■■■□□ 2.92
EEA1-203ENST00000547833 CFTRP13569 1480 aa33.23■■■□□ 2.91
EEA1-203ENST00000547833 PDS5BQ9NTI5 1447 aa33.17■■■□□ 2.9
EEA1-203ENST00000547833 ERCC6Q03468 1493 aa33.16■■■□□ 2.9
EEA1-203ENST00000547833 PRDM2Q13029 1718 aa33.15■■■□□ 2.9
EEA1-203ENST00000547833 KIF21AQ7Z4S6 1674 aa33.04■■■□□ 2.88
EEA1-203ENST00000547833 FANCD2Q9BXW9 1451 aa32.97■■■□□ 2.87
EEA1-203ENST00000547833 CEP164Q9UPV0 1460 aa32.93■■■□□ 2.86
EEA1-203ENST00000547833 THOC2Q8NI27 1593 aaKnown RBP32.81■■■□□ 2.84
EEA1-203ENST00000547833 MRC2Q9UBG0 1479 aa32.79■■■□□ 2.84
EEA1-203ENST00000547833 CUX2O14529 1486 aa32.66■■■□□ 2.82
EEA1-203ENST00000547833 WDR62O43379 1518 aa32.66■■■□□ 2.82
EEA1-203ENST00000547833 ABCC8Q09428 1581 aa32.58■■■□□ 2.81
EEA1-203ENST00000547833 URB2Q14146 1524 aaKnown RBP32.58■■■□□ 2.81
EEA1-203ENST00000547833 DNMBPQ6XZF7 1577 aa32.52■■■□□ 2.8
EEA1-203ENST00000547833 TOPBP1Q92547 1522 aa32.48■■■□□ 2.79
EEA1-203ENST00000547833 CUX1P39880 1505 aa32.36■■■□□ 2.77
EEA1-203ENST00000547833 WRNQ14191 1432 aaPredicted RBP eCLIP32.34■■■□□ 2.77
EEA1-203ENST00000547833 BIVM-ERCC5R4GMW8 1640 aa32.26■■■□□ 2.75
EEA1-203ENST00000547833 TOP2BQ02880 1626 aa32.25■■■□□ 2.75
EEA1-203ENST00000547833 POLA1P09884 1462 aaPredicted RBP32.23■■■□□ 2.75
EEA1-203ENST00000547833 FGD5Q6ZNL6 1462 aa32.22■■■□□ 2.75
EEA1-203ENST00000547833 IFT140Q96RY7 1462 aa32.22■■■□□ 2.75
EEA1-203ENST00000547833 SYNJ1O43426 1573 aa32.21■■■□□ 2.75
EEA1-203ENST00000547833 SOGA1O94964 1423 aa32.11■■■□□ 2.73
EEA1-203ENST00000547833 TARBP1Q13395 1621 aaKnown RBP32.1■■■□□ 2.73
EEA1-203ENST00000547833 RAD54L2Q9Y4B4 1467 aa32.05■■■□□ 2.72
EEA1-203ENST00000547833 WDR97A6NE52 1622 aa31.97■■■□□ 2.71
EEA1-203ENST00000547833 ZNF608Q9ULD9 1512 aaPredicted RBP31.95■■■□□ 2.7
EEA1-203ENST00000547833 ABCA10Q8WWZ4 1543 aa31.93■■■□□ 2.7
EEA1-203ENST00000547833 EIF4G3O43432 1585 aaKnown RBP31.93■■■□□ 2.7
EEA1-203ENST00000547833 TRIM41Q8WV44 630 aa31.85■■■□□ 2.69
EEA1-203ENST00000547833 TDRD9Q8NDG6 1382 aaKnown RBP31.83■■■□□ 2.69
EEA1-203ENST00000547833 AQRO60306 1485 aaKnown RBP eCLIP31.83■■■□□ 2.69
EEA1-203ENST00000547833 ABCA5Q8WWZ7 1642 aa31.78■■■□□ 2.68
EEA1-203ENST00000547833 GAPVD1Q14C86 1478 aa31.77■■■□□ 2.68
EEA1-203ENST00000547833 PBRM1Q86U86 1689 aa31.74■■■□□ 2.67
EEA1-203ENST00000547833 GRIN2BQ13224 1484 aa31.72■■■□□ 2.67
EEA1-203ENST00000547833 KIF27Q86VH2 1401 aa31.66■■■□□ 2.66
EEA1-203ENST00000547833 CHIC1Q5VXU3 224 aa31.65■■■□□ 2.66
EEA1-203ENST00000547833 MAGI1Q96QZ7 1491 aaPredicted RBP31.6■■■□□ 2.65
EEA1-203ENST00000547833 ERICH3Q5RHP9 1530 aa31.59■■■□□ 2.65
EEA1-203ENST00000547833 SNAPC4Q5SXM2 1469 aa31.59■■■□□ 2.65
EEA1-203ENST00000547833 CHD1O14646 1710 aa31.48■■■□□ 2.63
EEA1-203ENST00000547833 ADAMTS12P58397 1594 aa31.46■■■□□ 2.63
EEA1-203ENST00000547833 SYNJ2O15056 1496 aa31.46■■■□□ 2.63
EEA1-203ENST00000547833 CUL7Q14999 1698 aa31.43■■■□□ 2.62
EEA1-203ENST00000547833 FBLN2P98095 1184 aa31.42■■■□□ 2.62
EEA1-203ENST00000547833 FHAD1B1AJZ9 1412 aa31.41■■■□□ 2.62
EEA1-203ENST00000547833 CHMP7Q8WUX9 453 aaPredicted RBP31.41■■■□□ 2.62
EEA1-203ENST00000547833 IGF1RP08069 1367 aa31.39■■■□□ 2.62
EEA1-203ENST00000547833 RUSC2Q8N2Y8 1516 aa31.38■■■□□ 2.61
EEA1-203ENST00000547833 EEA1Q15075 1411 aa31.35■■■□□ 2.61
EEA1-203ENST00000547833 OSCARQ8IYS5 282 aa31.34■■■□□ 2.61
EEA1-203ENST00000547833 GRIN2AQ12879 1464 aa31.3■■■□□ 2.6
EEA1-203ENST00000547833 CARMIL1Q5VZK9 1371 aa31.27■■■□□ 2.6
EEA1-203ENST00000547833 CSRNP3Q8WYN3 585 aa31.17■■■□□ 2.58
EEA1-203ENST00000547833 RAPGEF2Q9Y4G8 1499 aa31.15■■■□□ 2.58
EEA1-203ENST00000547833 FAM9AQ8IZU1 332 aaPredicted RBP31.13■■■□□ 2.57
EEA1-203ENST00000547833 NUP160Q12769 1436 aa31.12■■■□□ 2.57
EEA1-203ENST00000547833 CEP170Q5SW79 1584 aa31.1■■■□□ 2.57
EEA1-203ENST00000547833 DNAJC5Q9H3Z4 198 aa31.1■■■□□ 2.57
EEA1-203ENST00000547833 PRXQ9BXM0 1461 aa31.09■■■□□ 2.57
EEA1-203ENST00000547833 CLASP1Q7Z460 1538 aa31.08■■■□□ 2.57
EEA1-203ENST00000547833 KIF21BO75037 1637 aa30.98■■■□□ 2.55
EEA1-203ENST00000547833 KIAA0586Q9BVV6 1533 aa30.94■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 233.1 ms