RNA–Protein interactions for RNA: ENST00000547632.1

ACVRL1-204, Transcript of activin A receptor like type 1, humanhuman

TSL 3

Gene ACVRL1, Length 857 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACVRL1-204ENST00000547632 NISCHQ9Y2I1 1504 aa33.03■■■□□ 2.88
ACVRL1-204ENST00000547632 ABCC9O60706 1549 aa29.77■■■□□ 2.36
ACVRL1-204ENST00000547632 CCDC180Q9P1Z9 1646 aa29.64■■■□□ 2.34
ACVRL1-204ENST00000547632 RB1CC1Q8TDY2 1594 aa28.3■■■□□ 2.12
ACVRL1-204ENST00000547632 NACADO15069 1562 aa28.09■■■□□ 2.09
ACVRL1-204ENST00000547632 DCAF8L2P0C7V8 631 aa28■■■□□ 2.07
ACVRL1-204ENST00000547632 DNAJC5BQ9UF47 199 aa27.95■■■□□ 2.06
ACVRL1-204ENST00000547632 PABPN1Q86U42 306 aaKnown RBP eCLIP27.73■■■□□ 2.03
ACVRL1-204ENST00000547632 MYO15BQ96JP2 1530 aa27.67■■■□□ 2.02
ACVRL1-204ENST00000547632 UNC13AQ9UPW8 1703 aa27.54■■■□□ 2
ACVRL1-204ENST00000547632 BICRAQ9NZM4 1560 aa27.41■■□□□ 1.98
ACVRL1-204ENST00000547632 ZCCHC6Q5VYS8 1495 aaKnown RBP27.37■■□□□ 1.97
ACVRL1-204ENST00000547632 DCAF1Q9Y4B6 1507 aa27.27■■□□□ 1.96
ACVRL1-204ENST00000547632 SHROOM4Q9ULL8 1493 aa27.12■■□□□ 1.93
ACVRL1-204ENST00000547632 SCRIBQ14160 1630 aa27.05■■□□□ 1.92
ACVRL1-204ENST00000547632 CC2D2AQ9P2K1 1620 aa26.86■■□□□ 1.89
ACVRL1-204ENST00000547632 CECR2Q9BXF3 1484 aa26.85■■□□□ 1.89
ACVRL1-204ENST00000547632 EIF4G1Q04637 1599 aaKnown RBP26.8■■□□□ 1.88
ACVRL1-204ENST00000547632 NCAPD3P42695 1498 aa25.93■■□□□ 1.74
ACVRL1-204ENST00000547632 ATAD2BQ9ULI0 1458 aa25.85■■□□□ 1.73
ACVRL1-204ENST00000547632 SMARCA2P51531 1590 aa25.78■■□□□ 1.72
ACVRL1-204ENST00000547632 SMARCA4P51532 1647 aa25.77■■□□□ 1.72
ACVRL1-204ENST00000547632 DNAJC5Q9H3Z4 198 aa25.77■■□□□ 1.72
ACVRL1-204ENST00000547632 ERCC6Q03468 1493 aa25.77■■□□□ 1.72
ACVRL1-204ENST00000547632 HMGXB3Q12766 1538 aa25.73■■□□□ 1.71
ACVRL1-204ENST00000547632 CUX2O14529 1486 aa25.71■■□□□ 1.71
ACVRL1-204ENST00000547632 BAZ1AQ9NRL2 1556 aaPredicted RBP25.66■■□□□ 1.7
ACVRL1-204ENST00000547632 BAZ1BQ9UIG0 1483 aaKnown RBP25.61■■□□□ 1.69
ACVRL1-204ENST00000547632 NESP48681 1621 aa25.53■■□□□ 1.68
ACVRL1-204ENST00000547632 PEG3Q9GZU2 1588 aa25.51■■□□□ 1.67
ACVRL1-204ENST00000547632 MROH2BQ7Z745 1585 aa25.44■■□□□ 1.66
ACVRL1-204ENST00000547632 LAMC3Q9Y6N6 1575 aa25.35■■□□□ 1.65
ACVRL1-204ENST00000547632 THOC2Q8NI27 1593 aaKnown RBP25.27■■□□□ 1.64
ACVRL1-204ENST00000547632 PDS5BQ9NTI5 1447 aa25.26■■□□□ 1.63
ACVRL1-204ENST00000547632 CADPSQ9ULU8 1353 aa25.17■■□□□ 1.62
ACVRL1-204ENST00000547632 KIF21AQ7Z4S6 1674 aa25.16■■□□□ 1.62
ACVRL1-204ENST00000547632 WIZO95785 1651 aa25.11■■□□□ 1.61
ACVRL1-204ENST00000547632 MRC2Q9UBG0 1479 aa25.02■■□□□ 1.6
ACVRL1-204ENST00000547632 WDR62O43379 1518 aa24.94■■□□□ 1.58
ACVRL1-204ENST00000547632 CEP164Q9UPV0 1460 aa24.91■■□□□ 1.58
ACVRL1-204ENST00000547632 RSF1Q96T23 1441 aaPredicted RBP24.91■■□□□ 1.58
ACVRL1-204ENST00000547632 FANCD2Q9BXW9 1451 aa24.87■■□□□ 1.57
ACVRL1-204ENST00000547632 CFTRP13569 1480 aa24.84■■□□□ 1.57
ACVRL1-204ENST00000547632 TOP2AP11388 1531 aaKnown RBP24.84■■□□□ 1.57
ACVRL1-204ENST00000547632 TRIM41Q8WV44 630 aa24.66■■□□□ 1.54
ACVRL1-204ENST00000547632 URB2Q14146 1524 aaKnown RBP24.64■■□□□ 1.53
ACVRL1-204ENST00000547632 OSCARQ8IYS5 282 aa24.55■■□□□ 1.52
ACVRL1-204ENST00000547632 CCDC88BA6NC98 1476 aa24.55■■□□□ 1.52
ACVRL1-204ENST00000547632 PRDM2Q13029 1718 aa24.51■■□□□ 1.51
ACVRL1-204ENST00000547632 IFT140Q96RY7 1462 aa24.43■■□□□ 1.5
ACVRL1-204ENST00000547632 TOPBP1Q92547 1522 aa24.38■■□□□ 1.49
ACVRL1-204ENST00000547632 ZNF608Q9ULD9 1512 aaPredicted RBP24.35■■□□□ 1.49
ACVRL1-204ENST00000547632 ABCC8Q09428 1581 aa24.34■■□□□ 1.49
ACVRL1-204ENST00000547632 DNMBPQ6XZF7 1577 aa24.28■■□□□ 1.48
ACVRL1-204ENST00000547632 EIF4G3O43432 1585 aaKnown RBP24.2■■□□□ 1.47
ACVRL1-204ENST00000547632 RIMBP3CA6NJZ7 1639 aa24.17■■□□□ 1.46
ACVRL1-204ENST00000547632 RIMBP3BA6NNM3 1639 aa24.17■■□□□ 1.46
ACVRL1-204ENST00000547632 RIMBP3Q9UFD9 1639 aa24.17■■□□□ 1.46
ACVRL1-204ENST00000547632 AQRO60306 1485 aaKnown RBP eCLIP24.14■■□□□ 1.46
ACVRL1-204ENST00000547632 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
ACVRL1-204ENST00000547632 TARBP1Q13395 1621 aaKnown RBP24.12■■□□□ 1.45
ACVRL1-204ENST00000547632 ARHGEF11O15085 1522 aa24.11■■□□□ 1.45
ACVRL1-204ENST00000547632 FBLN2P98095 1184 aa24.06■■□□□ 1.44
ACVRL1-204ENST00000547632 RAD54L2Q9Y4B4 1467 aa24.04■■□□□ 1.44
ACVRL1-204ENST00000547632 SOGA1O94964 1423 aa24.03■■□□□ 1.44
ACVRL1-204ENST00000547632 CHD1O14646 1710 aa24.01■■□□□ 1.43
ACVRL1-204ENST00000547632 TDRD9Q8NDG6 1382 aaKnown RBP24■■□□□ 1.43
ACVRL1-204ENST00000547632 CYB5RLQ6IPT4 315 aa23.98■■□□□ 1.43
ACVRL1-204ENST00000547632 FGD5Q6ZNL6 1462 aa23.97■■□□□ 1.43
ACVRL1-204ENST00000547632 WDR97A6NE52 1622 aa23.92■■□□□ 1.42
ACVRL1-204ENST00000547632 CUX1P39880 1505 aa23.91■■□□□ 1.42
ACVRL1-204ENST00000547632 SNAPC4Q5SXM2 1469 aa23.91■■□□□ 1.42
ACVRL1-204ENST00000547632 CHMP7Q8WUX9 453 aaPredicted RBP23.87■■□□□ 1.41
ACVRL1-204ENST00000547632 ARAP1Q96P48 1450 aa23.87■■□□□ 1.41
ACVRL1-204ENST00000547632 MAGI1Q96QZ7 1491 aaPredicted RBP23.85■■□□□ 1.41
ACVRL1-204ENST00000547632 GRIN2BQ13224 1484 aa23.84■■□□□ 1.41
ACVRL1-204ENST00000547632 SUPT5HO00267 1087 aaKnown RBP23.81■■□□□ 1.4
ACVRL1-204ENST00000547632 SYNJ1O43426 1573 aa23.78■■□□□ 1.4
ACVRL1-204ENST00000547632 SYNJ2O15056 1496 aa23.76■■□□□ 1.39
ACVRL1-204ENST00000547632 CLASP1Q7Z460 1538 aa23.76■■□□□ 1.39
ACVRL1-204ENST00000547632 TRHP20396 242 aaPredicted RBP23.76■■□□□ 1.39
ACVRL1-204ENST00000547632 GAPVD1Q14C86 1478 aa23.74■■□□□ 1.39
ACVRL1-204ENST00000547632 ABCA10Q8WWZ4 1543 aa23.69■■□□□ 1.38
ACVRL1-204ENST00000547632 PBRM1Q86U86 1689 aa23.67■■□□□ 1.38
ACVRL1-204ENST00000547632 ABCA5Q8WWZ7 1642 aa23.63■■□□□ 1.37
ACVRL1-204ENST00000547632 WRNQ14191 1432 aaPredicted RBP eCLIP23.61■■□□□ 1.37
ACVRL1-204ENST00000547632 GRIN2AQ12879 1464 aa23.52■■□□□ 1.36
ACVRL1-204ENST00000547632 TOP2BQ02880 1626 aa23.51■■□□□ 1.35
ACVRL1-204ENST00000547632 BIVM-ERCC5R4GMW8 1640 aa23.48■■□□□ 1.35
ACVRL1-204ENST00000547632 ADAMTS12P58397 1594 aa23.48■■□□□ 1.35
ACVRL1-204ENST00000547632 FHAD1B1AJZ9 1412 aa23.45■■□□□ 1.34
ACVRL1-204ENST00000547632 NUP160Q12769 1436 aa23.44■■□□□ 1.34
ACVRL1-204ENST00000547632 CEP170Q5SW79 1584 aa23.4■■□□□ 1.34
ACVRL1-204ENST00000547632 ERICH3Q5RHP9 1530 aa23.39■■□□□ 1.34
ACVRL1-204ENST00000547632 ERCC6L2Q5T890 1561 aa23.37■■□□□ 1.33
ACVRL1-204ENST00000547632 SHROOM2Q13796 1616 aa23.3■■□□□ 1.32
ACVRL1-204ENST00000547632 PRG4Q92954 1404 aaPredicted RBP23.24■■□□□ 1.31
ACVRL1-204ENST00000547632 JPH4Q96JJ6 628 aa23.23■■□□□ 1.31
ACVRL1-204ENST00000547632 AEBP2Q6ZN18 517 aaPredicted RBP23.16■■□□□ 1.3
ACVRL1-204ENST00000547632 RUSC2Q8N2Y8 1516 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms