RNA–Protein interactions for RNA: ENST00000547541.1

TARBP2-208, Transcript of TARBP2, RISC loading complex RNA binding subunit, humanhuman

TSL 3

Gene TARBP2, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP2-208ENST00000547541 NISCHQ9Y2I1 1504 aa22.92■■□□□ 1.26
TARBP2-208ENST00000547541 CCDC180Q9P1Z9 1646 aa20.02■□□□□ 0.8
TARBP2-208ENST00000547541 ZCCHC6Q5VYS8 1495 aaKnown RBP19.23■□□□□ 0.67
TARBP2-208ENST00000547541 DCAF1Q9Y4B6 1507 aa19.05■□□□□ 0.64
TARBP2-208ENST00000547541 ABCC9O60706 1549 aa18.87■□□□□ 0.61
TARBP2-208ENST00000547541 DCAF8L2P0C7V8 631 aa18.87■□□□□ 0.61
TARBP2-208ENST00000547541 MYO15BQ96JP2 1530 aa18.87■□□□□ 0.61
TARBP2-208ENST00000547541 NACADO15069 1562 aa18.7■□□□□ 0.58
TARBP2-208ENST00000547541 RB1CC1Q8TDY2 1594 aa18.51■□□□□ 0.55
TARBP2-208ENST00000547541 SHROOM4Q9ULL8 1493 aa18.51■□□□□ 0.55
TARBP2-208ENST00000547541 SCRIBQ14160 1630 aa18.27■□□□□ 0.52
TARBP2-208ENST00000547541 UNC13AQ9UPW8 1703 aa18.01■□□□□ 0.47
TARBP2-208ENST00000547541 BICRAQ9NZM4 1560 aa17.89■□□□□ 0.45
TARBP2-208ENST00000547541 SUPT5HO00267 1087 aaKnown RBP17.85■□□□□ 0.45
TARBP2-208ENST00000547541 PABPN1Q86U42 306 aaKnown RBP eCLIP17.79■□□□□ 0.44
TARBP2-208ENST00000547541 RSF1Q96T23 1441 aaPredicted RBP17.75■□□□□ 0.43
TARBP2-208ENST00000547541 CECR2Q9BXF3 1484 aa17.75■□□□□ 0.43
TARBP2-208ENST00000547541 BAZ1AQ9NRL2 1556 aaPredicted RBP17.72■□□□□ 0.43
TARBP2-208ENST00000547541 MROH2BQ7Z745 1585 aa17.65■□□□□ 0.42
TARBP2-208ENST00000547541 SMARCA4P51532 1647 aa17.59■□□□□ 0.41
TARBP2-208ENST00000547541 WIZO95785 1651 aa17.47■□□□□ 0.39
TARBP2-208ENST00000547541 PEG3Q9GZU2 1588 aa17.45■□□□□ 0.38
TARBP2-208ENST00000547541 DNAJC5BQ9UF47 199 aa17.4■□□□□ 0.38
TARBP2-208ENST00000547541 EIF4G1Q04637 1599 aaKnown RBP17.37■□□□□ 0.37
TARBP2-208ENST00000547541 TOP2AP11388 1531 aaKnown RBP17.37■□□□□ 0.37
TARBP2-208ENST00000547541 SMARCA2P51531 1590 aa17.36■□□□□ 0.37
TARBP2-208ENST00000547541 ATAD2BQ9ULI0 1458 aa17.36■□□□□ 0.37
TARBP2-208ENST00000547541 NCAPD3P42695 1498 aa17.27■□□□□ 0.36
TARBP2-208ENST00000547541 BAZ1BQ9UIG0 1483 aaKnown RBP17.23■□□□□ 0.35
TARBP2-208ENST00000547541 HMGXB3Q12766 1538 aa17.21■□□□□ 0.34
TARBP2-208ENST00000547541 CCDC88BA6NC98 1476 aa17.18■□□□□ 0.34
TARBP2-208ENST00000547541 CHIC1Q5VXU3 224 aa17.14■□□□□ 0.33
TARBP2-208ENST00000547541 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
TARBP2-208ENST00000547541 TRIM41Q8WV44 630 aa16.88■□□□□ 0.29
TARBP2-208ENST00000547541 CFTRP13569 1480 aa16.84■□□□□ 0.29
TARBP2-208ENST00000547541 CADPSQ9ULU8 1353 aa16.8■□□□□ 0.28
TARBP2-208ENST00000547541 WRNQ14191 1432 aaPredicted RBP eCLIP16.71■□□□□ 0.27
TARBP2-208ENST00000547541 ABCC8Q09428 1581 aa16.71■□□□□ 0.27
TARBP2-208ENST00000547541 PRDM2Q13029 1718 aa16.68■□□□□ 0.26
TARBP2-208ENST00000547541 LAMC3Q9Y6N6 1575 aa16.65■□□□□ 0.26
TARBP2-208ENST00000547541 TOP2BQ02880 1626 aa16.58■□□□□ 0.24
TARBP2-208ENST00000547541 SYNJ1O43426 1573 aa16.57■□□□□ 0.24
TARBP2-208ENST00000547541 FANCD2Q9BXW9 1451 aa16.56■□□□□ 0.24
TARBP2-208ENST00000547541 PDS5BQ9NTI5 1447 aa16.56■□□□□ 0.24
TARBP2-208ENST00000547541 BIVM-ERCC5R4GMW8 1640 aa16.56■□□□□ 0.24
TARBP2-208ENST00000547541 EEA1Q15075 1411 aa16.54■□□□□ 0.24
TARBP2-208ENST00000547541 NESP48681 1621 aa16.53■□□□□ 0.24
TARBP2-208ENST00000547541 CUX1P39880 1505 aa16.5■□□□□ 0.23
TARBP2-208ENST00000547541 CEP164Q9UPV0 1460 aa16.48■□□□□ 0.23
TARBP2-208ENST00000547541 FAM9AQ8IZU1 332 aaPredicted RBP16.44■□□□□ 0.22
TARBP2-208ENST00000547541 SOGA1O94964 1423 aa16.44■□□□□ 0.22
TARBP2-208ENST00000547541 CSRNP3Q8WYN3 585 aa16.42■□□□□ 0.22
TARBP2-208ENST00000547541 LOC105371045A0A1W2PR82 267 aa16.41■□□□□ 0.22
TARBP2-208ENST00000547541 DNMBPQ6XZF7 1577 aa16.41■□□□□ 0.22
TARBP2-208ENST00000547541 TOPBP1Q92547 1522 aa16.38■□□□□ 0.21
TARBP2-208ENST00000547541 RUSC2Q8N2Y8 1516 aa16.35■□□□□ 0.21
TARBP2-208ENST00000547541 FGD5Q6ZNL6 1462 aa16.35■□□□□ 0.21
TARBP2-208ENST00000547541 KIF27Q86VH2 1401 aa16.33■□□□□ 0.2
TARBP2-208ENST00000547541 URB2Q14146 1524 aaKnown RBP16.33■□□□□ 0.2
TARBP2-208ENST00000547541 KIF21AQ7Z4S6 1674 aa16.33■□□□□ 0.2
TARBP2-208ENST00000547541 MRC2Q9UBG0 1479 aa16.29■□□□□ 0.2
TARBP2-208ENST00000547541 POLA1P09884 1462 aaPredicted RBP16.29■□□□□ 0.2
TARBP2-208ENST00000547541 ABCA10Q8WWZ4 1543 aa16.25■□□□□ 0.19
TARBP2-208ENST00000547541 KIF21BO75037 1637 aa16.24■□□□□ 0.19
TARBP2-208ENST00000547541 CUX2O14529 1486 aa16.23■□□□□ 0.19
TARBP2-208ENST00000547541 GOLGA3Q08378 1498 aa16.22■□□□□ 0.19
TARBP2-208ENST00000547541 TNIKQ9UKE5 1360 aa16.22■□□□□ 0.19
TARBP2-208ENST00000547541 ERCC6Q03468 1493 aa16.22■□□□□ 0.19
TARBP2-208ENST00000547541 WDR62O43379 1518 aa16.2■□□□□ 0.18
TARBP2-208ENST00000547541 PRXQ9BXM0 1461 aa16.2■□□□□ 0.18
TARBP2-208ENST00000547541 RAD54L2Q9Y4B4 1467 aa16.19■□□□□ 0.18
TARBP2-208ENST00000547541 IGF1RP08069 1367 aa16.19■□□□□ 0.18
TARBP2-208ENST00000547541 ERICH3Q5RHP9 1530 aa16.18■□□□□ 0.18
TARBP2-208ENST00000547541 UBTFP17480 764 aaKnown RBP16.15■□□□□ 0.18
TARBP2-208ENST00000547541 WDR97A6NE52 1622 aa16.13■□□□□ 0.17
TARBP2-208ENST00000547541 TARBP1Q13395 1621 aaKnown RBP16.12■□□□□ 0.17
TARBP2-208ENST00000547541 EHMT2Q96KQ7 1210 aa16.12■□□□□ 0.17
TARBP2-208ENST00000547541 THOC2Q8NI27 1593 aaKnown RBP16.12■□□□□ 0.17
TARBP2-208ENST00000547541 IFT140Q96RY7 1462 aa16.11■□□□□ 0.17
TARBP2-208ENST00000547541 RAPGEF2Q9Y4G8 1499 aa16.1■□□□□ 0.17
TARBP2-208ENST00000547541 CARMIL1Q5VZK9 1371 aa16.1■□□□□ 0.17
TARBP2-208ENST00000547541 GAPVD1Q14C86 1478 aa16.08■□□□□ 0.16
TARBP2-208ENST00000547541 ABCA5Q8WWZ7 1642 aa16.08■□□□□ 0.16
TARBP2-208ENST00000547541 TDRD9Q8NDG6 1382 aaKnown RBP16.06■□□□□ 0.16
TARBP2-208ENST00000547541 CUL7Q14999 1698 aa16.05■□□□□ 0.16
TARBP2-208ENST00000547541 CEP162Q5TB80 1403 aa16.04■□□□□ 0.16
TARBP2-208ENST00000547541 GRIN2BQ13224 1484 aa15.98■□□□□ 0.15
TARBP2-208ENST00000547541 AQRO60306 1485 aaKnown RBP eCLIP15.97■□□□□ 0.155e-7■■■■□ 21.2
TARBP2-208ENST00000547541 CLIP1P30622 1438 aa15.94■□□□□ 0.14
TARBP2-208ENST00000547541 FHAD1B1AJZ9 1412 aa15.94■□□□□ 0.14
TARBP2-208ENST00000547541 ZNF608Q9ULD9 1512 aaPredicted RBP15.93■□□□□ 0.14
TARBP2-208ENST00000547541 PBRM1Q86U86 1689 aa15.92■□□□□ 0.14
TARBP2-208ENST00000547541 EIF4G3O43432 1585 aaKnown RBP15.87■□□□□ 0.13
TARBP2-208ENST00000547541 ADAMTS12P58397 1594 aa15.86■□□□□ 0.13
TARBP2-208ENST00000547541 MAGI1Q96QZ7 1491 aaPredicted RBP15.85■□□□□ 0.13
TARBP2-208ENST00000547541 VPS8Q8N3P4 1428 aa15.82■□□□□ 0.12
TARBP2-208ENST00000547541 SNAPC4Q5SXM2 1469 aa15.81■□□□□ 0.12
TARBP2-208ENST00000547541 CTTNBP2Q8WZ74 1663 aa15.79■□□□□ 0.12
TARBP2-208ENST00000547541 ARHGAP35Q9NRY4 1499 aa15.79■□□□□ 0.12
TARBP2-208ENST00000547541 SYNJ2O15056 1496 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms