RNA–Protein interactions for RNA: ENST00000547400.5

ACVRL1-203, Transcript of activin A receptor like type 1, humanhuman

TSL 3

Gene ACVRL1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACVRL1-203ENST00000547400 NISCHQ9Y2I1 1504 aa48.73■■■■■ 5.39
ACVRL1-203ENST00000547400 CCDC180Q9P1Z9 1646 aa43.31■■■■■ 4.52
ACVRL1-203ENST00000547400 ABCC9O60706 1549 aa41.96■■■■■ 4.31
ACVRL1-203ENST00000547400 NACADO15069 1562 aa40.67■■■■■ 4.1
ACVRL1-203ENST00000547400 ZCCHC6Q5VYS8 1495 aaKnown RBP40.66■■■■■ 4.1
ACVRL1-203ENST00000547400 RB1CC1Q8TDY2 1594 aa40.63■■■■■ 4.09
ACVRL1-203ENST00000547400 MYO15BQ96JP2 1530 aa40.61■■■■■ 4.09
ACVRL1-203ENST00000547400 DCAF1Q9Y4B6 1507 aa40.47■■■■■ 4.07
ACVRL1-203ENST00000547400 DCAF8L2P0C7V8 631 aa40.4■■■■■ 4.06
ACVRL1-203ENST00000547400 UNC13AQ9UPW8 1703 aa39.54■■■■□ 3.92
ACVRL1-203ENST00000547400 SCRIBQ14160 1630 aa39.36■■■■□ 3.89
ACVRL1-203ENST00000547400 BICRAQ9NZM4 1560 aa39.29■■■■□ 3.88
ACVRL1-203ENST00000547400 SHROOM4Q9ULL8 1493 aa39.19■■■■□ 3.86
ACVRL1-203ENST00000547400 PABPN1Q86U42 306 aaKnown RBP eCLIP39.17■■■■□ 3.86
ACVRL1-203ENST00000547400 EIF4G1Q04637 1599 aaKnown RBP38.27■■■■□ 3.72
ACVRL1-203ENST00000547400 DNAJC5BQ9UF47 199 aa38.2■■■■□ 3.71
ACVRL1-203ENST00000547400 CC2D2AQ9P2K1 1620 aa38.02■■■■□ 3.68
ACVRL1-203ENST00000547400 BAZ1AQ9NRL2 1556 aaPredicted RBP37.8■■■■□ 3.64
ACVRL1-203ENST00000547400 CECR2Q9BXF3 1484 aa37.8■■■■□ 3.64
ACVRL1-203ENST00000547400 SMARCA4P51532 1647 aa37.75■■■■□ 3.63
ACVRL1-203ENST00000547400 SMARCA2P51531 1590 aa37.55■■■■□ 3.6
ACVRL1-203ENST00000547400 NCAPD3P42695 1498 aa37.5■■■■□ 3.59
ACVRL1-203ENST00000547400 ATAD2BQ9ULI0 1458 aa37.49■■■■□ 3.59
ACVRL1-203ENST00000547400 MROH2BQ7Z745 1585 aa37.46■■■■□ 3.59
ACVRL1-203ENST00000547400 PEG3Q9GZU2 1588 aa37.46■■■■□ 3.59
ACVRL1-203ENST00000547400 HMGXB3Q12766 1538 aa37.37■■■■□ 3.57
ACVRL1-203ENST00000547400 BAZ1BQ9UIG0 1483 aaKnown RBP37.21■■■■□ 3.55
ACVRL1-203ENST00000547400 RSF1Q96T23 1441 aaPredicted RBP37.16■■■■□ 3.54
ACVRL1-203ENST00000547400 WIZO95785 1651 aa37.03■■■■□ 3.52
ACVRL1-203ENST00000547400 TOP2AP11388 1531 aaKnown RBP36.8■■■■□ 3.48
ACVRL1-203ENST00000547400 LAMC3Q9Y6N6 1575 aa36.49■■■■□ 3.43
ACVRL1-203ENST00000547400 CADPSQ9ULU8 1353 aa36.39■■■■□ 3.42
ACVRL1-203ENST00000547400 NESP48681 1621 aa36.34■■■■□ 3.41
ACVRL1-203ENST00000547400 CCDC88BA6NC98 1476 aa36.28■■■■□ 3.4
ACVRL1-203ENST00000547400 ERCC6Q03468 1493 aa36.25■■■■□ 3.39
ACVRL1-203ENST00000547400 PDS5BQ9NTI5 1447 aa36.25■■■■□ 3.39
ACVRL1-203ENST00000547400 SUPT5HO00267 1087 aaKnown RBP36.23■■■■□ 3.39
ACVRL1-203ENST00000547400 CFTRP13569 1480 aa36.23■■■■□ 3.39
ACVRL1-203ENST00000547400 KIF21AQ7Z4S6 1674 aa35.96■■■■□ 3.35
ACVRL1-203ENST00000547400 PRDM2Q13029 1718 aa35.96■■■■□ 3.35
ACVRL1-203ENST00000547400 FANCD2Q9BXW9 1451 aa35.94■■■■□ 3.34
ACVRL1-203ENST00000547400 CEP164Q9UPV0 1460 aa35.91■■■■□ 3.34
ACVRL1-203ENST00000547400 CUX2O14529 1486 aa35.89■■■■□ 3.34
ACVRL1-203ENST00000547400 THOC2Q8NI27 1593 aaKnown RBP35.86■■■■□ 3.33
ACVRL1-203ENST00000547400 MRC2Q9UBG0 1479 aa35.81■■■■□ 3.32
ACVRL1-203ENST00000547400 WDR62O43379 1518 aa35.7■■■■□ 3.31
ACVRL1-203ENST00000547400 ABCC8Q09428 1581 aa35.54■■■■□ 3.28
ACVRL1-203ENST00000547400 URB2Q14146 1524 aaKnown RBP35.52■■■■□ 3.28
ACVRL1-203ENST00000547400 DNMBPQ6XZF7 1577 aa35.41■■■■□ 3.26
ACVRL1-203ENST00000547400 TOPBP1Q92547 1522 aa35.38■■■■□ 3.25
ACVRL1-203ENST00000547400 IFT140Q96RY7 1462 aa35.19■■■■□ 3.22
ACVRL1-203ENST00000547400 CUX1P39880 1505 aa35.16■■■■□ 3.22
ACVRL1-203ENST00000547400 POLA1P09884 1462 aaPredicted RBP35.1■■■■□ 3.21
ACVRL1-203ENST00000547400 WRNQ14191 1432 aaPredicted RBP eCLIP35.07■■■■□ 3.21
ACVRL1-203ENST00000547400 FGD5Q6ZNL6 1462 aa35.03■■■■□ 3.2
ACVRL1-203ENST00000547400 TOP2BQ02880 1626 aa34.99■■■■□ 3.19
ACVRL1-203ENST00000547400 TARBP1Q13395 1621 aaKnown RBP34.97■■■■□ 3.19
ACVRL1-203ENST00000547400 BIVM-ERCC5R4GMW8 1640 aa34.97■■■■□ 3.19
ACVRL1-203ENST00000547400 SOGA1O94964 1423 aa34.95■■■■□ 3.19
ACVRL1-203ENST00000547400 WDR97A6NE52 1622 aa34.91■■■■□ 3.18
ACVRL1-203ENST00000547400 SYNJ1O43426 1573 aa34.9■■■■□ 3.18
ACVRL1-203ENST00000547400 RAD54L2Q9Y4B4 1467 aa34.85■■■■□ 3.17
ACVRL1-203ENST00000547400 ZNF608Q9ULD9 1512 aaPredicted RBP34.85■■■■□ 3.17
ACVRL1-203ENST00000547400 EIF4G3O43432 1585 aaKnown RBP34.79■■■■□ 3.16
ACVRL1-203ENST00000547400 ABCA10Q8WWZ4 1543 aa34.77■■■■□ 3.16
ACVRL1-203ENST00000547400 AQRO60306 1485 aaKnown RBP eCLIP34.68■■■■□ 3.14
ACVRL1-203ENST00000547400 TDRD9Q8NDG6 1382 aaKnown RBP34.65■■■■□ 3.14
ACVRL1-203ENST00000547400 ABCA5Q8WWZ7 1642 aa34.58■■■■□ 3.13
ACVRL1-203ENST00000547400 GRIN2BQ13224 1484 aa34.58■■■■□ 3.13
ACVRL1-203ENST00000547400 GAPVD1Q14C86 1478 aa34.57■■■■□ 3.12
ACVRL1-203ENST00000547400 MAGI1Q96QZ7 1491 aaPredicted RBP34.51■■■■□ 3.11
ACVRL1-203ENST00000547400 PBRM1Q86U86 1689 aa34.44■■■■□ 3.1
ACVRL1-203ENST00000547400 SNAPC4Q5SXM2 1469 aa34.44■■■■□ 3.1
ACVRL1-203ENST00000547400 DNAJC5Q9H3Z4 198 aa34.4■■■■□ 3.1
ACVRL1-203ENST00000547400 ERICH3Q5RHP9 1530 aa34.39■■■■□ 3.1
ACVRL1-203ENST00000547400 KIF27Q86VH2 1401 aa34.36■■■■□ 3.09
ACVRL1-203ENST00000547400 OSCARQ8IYS5 282 aa34.34■■■■□ 3.09
ACVRL1-203ENST00000547400 SYNJ2O15056 1496 aa34.33■■■■□ 3.09
ACVRL1-203ENST00000547400 TRIM41Q8WV44 630 aa34.32■■■■□ 3.08
ACVRL1-203ENST00000547400 CHD1O14646 1710 aa34.25■■■■□ 3.07
ACVRL1-203ENST00000547400 CHMP7Q8WUX9 453 aaPredicted RBP34.24■■■■□ 3.07
ACVRL1-203ENST00000547400 ADAMTS12P58397 1594 aa34.23■■■■□ 3.07
ACVRL1-203ENST00000547400 FHAD1B1AJZ9 1412 aa34.23■■■■□ 3.07
ACVRL1-203ENST00000547400 FBLN2P98095 1184 aa34.19■■■■□ 3.06
ACVRL1-203ENST00000547400 CUL7Q14999 1698 aa34.12■■■■□ 3.05
ACVRL1-203ENST00000547400 IGF1RP08069 1367 aa34.11■■■■□ 3.05
ACVRL1-203ENST00000547400 GRIN2AQ12879 1464 aa34.1■■■■□ 3.05
ACVRL1-203ENST00000547400 CHIC1Q5VXU3 224 aa34■■■■□ 3.03
ACVRL1-203ENST00000547400 CLASP1Q7Z460 1538 aa33.99■■■■□ 3.03
ACVRL1-203ENST00000547400 NUP160Q12769 1436 aa33.97■■■■□ 3.03
ACVRL1-203ENST00000547400 CARMIL1Q5VZK9 1371 aa33.94■■■■□ 3.02
ACVRL1-203ENST00000547400 EEA1Q15075 1411 aa33.94■■■■□ 3.02
ACVRL1-203ENST00000547400 RUSC2Q8N2Y8 1516 aa33.89■■■■□ 3.02
ACVRL1-203ENST00000547400 CEP170Q5SW79 1584 aa33.87■■■■□ 3.01
ACVRL1-203ENST00000547400 RAPGEF2Q9Y4G8 1499 aa33.8■■■■□ 3
ACVRL1-203ENST00000547400 ARHGEF11O15085 1522 aa33.78■■■■□ 3
ACVRL1-203ENST00000547400 PRXQ9BXM0 1461 aa33.73■■■□□ 2.99
ACVRL1-203ENST00000547400 RIMBP3CA6NJZ7 1639 aa33.72■■■□□ 2.99
ACVRL1-203ENST00000547400 RIMBP3BA6NNM3 1639 aa33.72■■■□□ 2.99
ACVRL1-203ENST00000547400 RIMBP3Q9UFD9 1639 aa33.72■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms