RNA–Protein interactions for RNA: ENST00000547043.1

BRAP-203, Transcript of BRCA1 associated protein, humanhuman

TSL 3

Gene BRAP, Length 1,543 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAP-203ENST00000547043 AEBP2Q6ZN18 517 aaPredicted RBP19.58■□□□□ 0.73
BRAP-203ENST00000547043 CHIC1Q5VXU3 224 aa18.47■□□□□ 0.55
BRAP-203ENST00000547043 SENP3Q9H4L4 574 aaPredicted RBP16.92■□□□□ 0.3
BRAP-203ENST00000547043 PHF23Q9BUL5 403 aaPredicted RBP16.57■□□□□ 0.24
BRAP-203ENST00000547043 NISCHQ9Y2I1 1504 aa15.78■□□□□ 0.12
BRAP-203ENST00000547043 FOXD1Q16676 465 aa15.71■□□□□ 0.11
BRAP-203ENST00000547043 POTEDQ86YR6 584 aa15.17■□□□□ 0.02
BRAP-203ENST00000547043 MSH5O43196 834 aa14.98□□□□□ -0.01
BRAP-203ENST00000547043 PIAS4Q8N2W9 510 aaPredicted RBP14.64□□□□□ -0.07
BRAP-203ENST00000547043 PLPPR3Q6T4P5 718 aa14.51□□□□□ -0.09
BRAP-203ENST00000547043 PPP6R1Q9UPN7 881 aa14.33□□□□□ -0.12
BRAP-203ENST00000547043 ADRA2BP18089 450 aa14.29□□□□□ -0.12
BRAP-203ENST00000547043 ABCC9O60706 1549 aa14.14□□□□□ -0.15
BRAP-203ENST00000547043 CCDC180Q9P1Z9 1646 aa14.02□□□□□ -0.17
BRAP-203ENST00000547043 DNAJC5BQ9UF47 199 aa13.49□□□□□ -0.25
BRAP-203ENST00000547043 DCAF8L2P0C7V8 631 aa13.41□□□□□ -0.26
BRAP-203ENST00000547043 RB1CC1Q8TDY2 1594 aa13.36□□□□□ -0.27
BRAP-203ENST00000547043 DMRT2Q9Y5R5 561 aa13.32□□□□□ -0.28
BRAP-203ENST00000547043 NACADO15069 1562 aa13.29□□□□□ -0.28
BRAP-203ENST00000547043 SCAF1Q9H7N4 1312 aaKnown RBP13.27□□□□□ -0.29
BRAP-203ENST00000547043 PABPN1Q86U42 306 aaKnown RBP eCLIP13.24□□□□□ -0.29
BRAP-203ENST00000547043 MAPK8IP2Q13387 824 aaPredicted RBP13.22□□□□□ -0.29
BRAP-203ENST00000547043 UNC13AQ9UPW8 1703 aa13.09□□□□□ -0.31
BRAP-203ENST00000547043 MYO15BQ96JP2 1530 aa13.09□□□□□ -0.31
BRAP-203ENST00000547043 ZCCHC6Q5VYS8 1495 aaKnown RBP13.07□□□□□ -0.32
BRAP-203ENST00000547043 BICRAQ9NZM4 1560 aa13.06□□□□□ -0.32
BRAP-203ENST00000547043 CACNB1Q02641 598 aaPredicted RBP13.06□□□□□ -0.32
BRAP-203ENST00000547043 DCAF1Q9Y4B6 1507 aa12.96□□□□□ -0.33
BRAP-203ENST00000547043 DNAJC5Q9H3Z4 198 aa12.95□□□□□ -0.34
BRAP-203ENST00000547043 SCRIBQ14160 1630 aa12.9□□□□□ -0.34
BRAP-203ENST00000547043 DCAF8L1A6NGE4 600 aa12.8□□□□□ -0.36
BRAP-203ENST00000547043 SHROOM4Q9ULL8 1493 aa12.73□□□□□ -0.37
BRAP-203ENST00000547043 CC2D2AQ9P2K1 1620 aa12.72□□□□□ -0.37
BRAP-203ENST00000547043 EIF4G1Q04637 1599 aaKnown RBP12.7□□□□□ -0.38
BRAP-203ENST00000547043 CECR2Q9BXF3 1484 aa12.69□□□□□ -0.38
BRAP-203ENST00000547043 HOXD11P31277 338 aaPredicted RBP12.67□□□□□ -0.38
BRAP-203ENST00000547043 RNF39Q9H2S5 420 aa12.67□□□□□ -0.38
BRAP-203ENST00000547043 PPP4R3CPQ6ZMV5 832 aa12.62□□□□□ -0.39
BRAP-203ENST00000547043 C1QBPQ07021 282 aaKnown RBP12.53□□□□□ -0.4
BRAP-203ENST00000547043 CNKSR2Q8WXI2 1034 aa12.52□□□□□ -0.41
BRAP-203ENST00000547043 RNF216Q9NWF9 866 aaPredicted RBP12.5□□□□□ -0.41
BRAP-203ENST00000547043 NCAPD3P42695 1498 aa12.31□□□□□ -0.44
BRAP-203ENST00000547043 ATAD2BQ9ULI0 1458 aa12.31□□□□□ -0.44
BRAP-203ENST00000547043 SMARCA4P51532 1647 aa12.27□□□□□ -0.44
BRAP-203ENST00000547043 MROH2BQ7Z745 1585 aa12.21□□□□□ -0.45
BRAP-203ENST00000547043 SMARCA2P51531 1590 aa12.2□□□□□ -0.46
BRAP-203ENST00000547043 BAZ1AQ9NRL2 1556 aaPredicted RBP12.19□□□□□ -0.46
BRAP-203ENST00000547043 NESP48681 1621 aa12.19□□□□□ -0.46
BRAP-203ENST00000547043 HMGXB3Q12766 1538 aa12.18□□□□□ -0.46
BRAP-203ENST00000547043 BAZ1BQ9UIG0 1483 aaKnown RBP12.16□□□□□ -0.46
BRAP-203ENST00000547043 ERCC6Q03468 1493 aa12.14□□□□□ -0.47
BRAP-203ENST00000547043 NCBP3Q53F19 620 aaKnown RBP12.12□□□□□ -0.47
BRAP-203ENST00000547043 PEG3Q9GZU2 1588 aa12.12□□□□□ -0.47
BRAP-203ENST00000547043 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.11□□□□□ -0.47
BRAP-203ENST00000547043 TRIM41Q8WV44 630 aa12.06□□□□□ -0.48
BRAP-203ENST00000547043 CUX2O14529 1486 aa12.06□□□□□ -0.48
BRAP-203ENST00000547043 WIZO95785 1651 aa12.04□□□□□ -0.48
BRAP-203ENST00000547043 RSF1Q96T23 1441 aaPredicted RBP11.98□□□□□ -0.49
BRAP-203ENST00000547043 LAMC3Q9Y6N6 1575 aa11.97□□□□□ -0.49
BRAP-203ENST00000547043 CADPSQ9ULU8 1353 aa11.96□□□□□ -0.49
BRAP-203ENST00000547043 THOC2Q8NI27 1593 aaKnown RBP11.96□□□□□ -0.49
BRAP-203ENST00000547043 KIF21AQ7Z4S6 1674 aa11.95□□□□□ -0.5
BRAP-203ENST00000547043 PDS5BQ9NTI5 1447 aa11.93□□□□□ -0.5
BRAP-203ENST00000547043 POTEHQ6S545 545 aa11.85□□□□□ -0.51
BRAP-203ENST00000547043 TOP2AP11388 1531 aaKnown RBP11.84□□□□□ -0.51
BRAP-203ENST00000547043 MRC2Q9UBG0 1479 aa11.84□□□□□ -0.51
BRAP-203ENST00000547043 CFTRP13569 1480 aa11.82□□□□□ -0.52
BRAP-203ENST00000547043 FANCD2Q9BXW9 1451 aa11.82□□□□□ -0.52
BRAP-203ENST00000547043 NPM3O75607 178 aaKnown RBP11.81□□□□□ -0.52
BRAP-203ENST00000547043 CEP164Q9UPV0 1460 aa11.8□□□□□ -0.52
BRAP-203ENST00000547043 WDR62O43379 1518 aa11.8□□□□□ -0.52
BRAP-203ENST00000547043 CCDC88BA6NC98 1476 aa11.77□□□□□ -0.52
BRAP-203ENST00000547043 URB2Q14146 1524 aaKnown RBP11.75□□□□□ -0.53
BRAP-203ENST00000547043 CAPN15O75808 1086 aa11.74□□□□□ -0.53
BRAP-203ENST00000547043 U3KPZ7 1027 aaPredicted RBP11.74□□□□□ -0.53
BRAP-203ENST00000547043 DSG3P32926 999 aa11.72□□□□□ -0.53
BRAP-203ENST00000547043 SPINK5Q9NQ38 1064 aaPredicted RBP11.65□□□□□ -0.54
BRAP-203ENST00000547043 ZNF608Q9ULD9 1512 aaPredicted RBP11.62□□□□□ -0.55
BRAP-203ENST00000547043 TOPBP1Q92547 1522 aa11.6□□□□□ -0.55
BRAP-203ENST00000547043 OSCARQ8IYS5 282 aa11.6□□□□□ -0.55
BRAP-203ENST00000547043 PRDM2Q13029 1718 aa11.59□□□□□ -0.55
BRAP-203ENST00000547043 APLP2Q06481 763 aa11.57□□□□□ -0.56
BRAP-203ENST00000547043 IFT140Q96RY7 1462 aa11.56□□□□□ -0.56
BRAP-203ENST00000547043 SUPT5HO00267 1087 aaKnown RBP11.55□□□□□ -0.56
BRAP-203ENST00000547043 AQRO60306 1485 aaKnown RBP eCLIP11.53□□□□□ -0.56
BRAP-203ENST00000547043 DNMBPQ6XZF7 1577 aa11.53□□□□□ -0.56
BRAP-203ENST00000547043 RAD54L2Q9Y4B4 1467 aa11.51□□□□□ -0.57
BRAP-203ENST00000547043 ABCC8Q09428 1581 aa11.5□□□□□ -0.57
BRAP-203ENST00000547043 POLA1P09884 1462 aaPredicted RBP11.5□□□□□ -0.57
BRAP-203ENST00000547043 TARBP1Q13395 1621 aaKnown RBP11.49□□□□□ -0.57
BRAP-203ENST00000547043 EIF4G3O43432 1585 aaKnown RBP11.48□□□□□ -0.57
BRAP-203ENST00000547043 TDRD9Q8NDG6 1382 aaKnown RBP11.47□□□□□ -0.57
BRAP-203ENST00000547043 ZNF219Q9P2Y4 722 aaPredicted RBP11.47□□□□□ -0.57
BRAP-203ENST00000547043 FBLN2P98095 1184 aa11.45□□□□□ -0.58
BRAP-203ENST00000547043 SOGA1O94964 1423 aa11.45□□□□□ -0.58
BRAP-203ENST00000547043 CUX1P39880 1505 aa11.45□□□□□ -0.58
BRAP-203ENST00000547043 TRHP20396 242 aaPredicted RBP11.44□□□□□ -0.58
BRAP-203ENST00000547043 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
BRAP-203ENST00000547043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.43□□□□□ -0.58
BRAP-203ENST00000547043 HNRNPUL2Q1KMD3 747 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms