RNA–Protein interactions for RNA: ENST00000546799.1

GDF11-202, Transcript of growth differentiation factor 11, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene GDF11, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF11-202ENST00000546799 NISCHQ9Y2I1 1504 aa49.27■■■■■ 5.48
GDF11-202ENST00000546799 CCDC180Q9P1Z9 1646 aa43.89■■■■■ 4.62
GDF11-202ENST00000546799 ABCC9O60706 1549 aa43.38■■■■■ 4.54
GDF11-202ENST00000546799 RB1CC1Q8TDY2 1594 aa41.47■■■■■ 4.23
GDF11-202ENST00000546799 NACADO15069 1562 aa41.34■■■■■ 4.21
GDF11-202ENST00000546799 DCAF8L2P0C7V8 631 aa41.26■■■■■ 4.2
GDF11-202ENST00000546799 MYO15BQ96JP2 1530 aa40.98■■■■■ 4.15
GDF11-202ENST00000546799 ZCCHC6Q5VYS8 1495 aaKnown RBP40.96■■■■■ 4.15
GDF11-202ENST00000546799 DCAF1Q9Y4B6 1507 aa40.69■■■■■ 4.1
GDF11-202ENST00000546799 UNC13AQ9UPW8 1703 aa40.67■■■■■ 4.1
GDF11-202ENST00000546799 PABPN1Q86U42 306 aaKnown RBP eCLIP40.51■■■■■ 4.08
GDF11-202ENST00000546799 BICRAQ9NZM4 1560 aa40.4■■■■■ 4.06
GDF11-202ENST00000546799 DNAJC5BQ9UF47 199 aa40.29■■■■■ 4.04
GDF11-202ENST00000546799 SCRIBQ14160 1630 aa40.1■■■■■ 4.01
GDF11-202ENST00000546799 SHROOM4Q9ULL8 1493 aa39.72■■■■□ 3.95
GDF11-202ENST00000546799 EIF4G1Q04637 1599 aaKnown RBP39.28■■■■□ 3.88
GDF11-202ENST00000546799 CC2D2AQ9P2K1 1620 aa39.22■■■■□ 3.87
GDF11-202ENST00000546799 CECR2Q9BXF3 1484 aa38.98■■■■□ 3.83
GDF11-202ENST00000546799 SMARCA4P51532 1647 aa38.3■■■■□ 3.72
GDF11-202ENST00000546799 NCAPD3P42695 1498 aa38.21■■■■□ 3.71
GDF11-202ENST00000546799 ATAD2BQ9ULI0 1458 aa38.19■■■■□ 3.7
GDF11-202ENST00000546799 BAZ1AQ9NRL2 1556 aaPredicted RBP38.14■■■■□ 3.7
GDF11-202ENST00000546799 SMARCA2P51531 1590 aa38.04■■■■□ 3.68
GDF11-202ENST00000546799 MROH2BQ7Z745 1585 aa38.02■■■■□ 3.68
GDF11-202ENST00000546799 HMGXB3Q12766 1538 aa37.95■■■■□ 3.67
GDF11-202ENST00000546799 PEG3Q9GZU2 1588 aa37.93■■■■□ 3.66
GDF11-202ENST00000546799 BAZ1BQ9UIG0 1483 aaKnown RBP37.8■■■■□ 3.64
GDF11-202ENST00000546799 WIZO95785 1651 aa37.59■■■■□ 3.61
GDF11-202ENST00000546799 NESP48681 1621 aa37.5■■■■□ 3.59
GDF11-202ENST00000546799 RSF1Q96T23 1441 aaPredicted RBP37.43■■■■□ 3.58
GDF11-202ENST00000546799 ERCC6Q03468 1493 aa37.32■■■■□ 3.56
GDF11-202ENST00000546799 LAMC3Q9Y6N6 1575 aa37.21■■■■□ 3.55
GDF11-202ENST00000546799 TOP2AP11388 1531 aaKnown RBP37.09■■■■□ 3.53
GDF11-202ENST00000546799 CUX2O14529 1486 aa37.06■■■■□ 3.52
GDF11-202ENST00000546799 CADPSQ9ULU8 1353 aa37.05■■■■□ 3.52
GDF11-202ENST00000546799 KIF21AQ7Z4S6 1674 aa36.99■■■■□ 3.51
GDF11-202ENST00000546799 THOC2Q8NI27 1593 aaKnown RBP36.95■■■■□ 3.51
GDF11-202ENST00000546799 PDS5BQ9NTI5 1447 aa36.94■■■■□ 3.5
GDF11-202ENST00000546799 CFTRP13569 1480 aa36.79■■■■□ 3.48
GDF11-202ENST00000546799 CCDC88BA6NC98 1476 aa36.71■■■■□ 3.47
GDF11-202ENST00000546799 FANCD2Q9BXW9 1451 aa36.64■■■■□ 3.46
GDF11-202ENST00000546799 MRC2Q9UBG0 1479 aa36.63■■■■□ 3.45
GDF11-202ENST00000546799 CEP164Q9UPV0 1460 aa36.59■■■■□ 3.45
GDF11-202ENST00000546799 WDR62O43379 1518 aa36.55■■■■□ 3.44
GDF11-202ENST00000546799 PRDM2Q13029 1718 aa36.44■■■■□ 3.42
GDF11-202ENST00000546799 DNAJC5Q9H3Z4 198 aa36.43■■■■□ 3.42
GDF11-202ENST00000546799 URB2Q14146 1524 aaKnown RBP36.36■■■■□ 3.41
GDF11-202ENST00000546799 SUPT5HO00267 1087 aaKnown RBP36.16■■■■□ 3.38
GDF11-202ENST00000546799 TOPBP1Q92547 1522 aa36.03■■■■□ 3.36
GDF11-202ENST00000546799 DNMBPQ6XZF7 1577 aa35.93■■■■□ 3.34
GDF11-202ENST00000546799 ABCC8Q09428 1581 aa35.88■■■■□ 3.33
GDF11-202ENST00000546799 IFT140Q96RY7 1462 aa35.84■■■■□ 3.33
GDF11-202ENST00000546799 ZNF608Q9ULD9 1512 aaPredicted RBP35.83■■■■□ 3.33
GDF11-202ENST00000546799 POLA1P09884 1462 aaPredicted RBP35.72■■■■□ 3.31
GDF11-202ENST00000546799 TARBP1Q13395 1621 aaKnown RBP35.71■■■■□ 3.31
GDF11-202ENST00000546799 CUX1P39880 1505 aa35.67■■■■□ 3.3
GDF11-202ENST00000546799 EIF4G3O43432 1585 aaKnown RBP35.61■■■■□ 3.29
GDF11-202ENST00000546799 RAD54L2Q9Y4B4 1467 aa35.6■■■■□ 3.29
GDF11-202ENST00000546799 FGD5Q6ZNL6 1462 aa35.57■■■■□ 3.28
GDF11-202ENST00000546799 AQRO60306 1485 aaKnown RBP eCLIP35.55■■■■□ 3.28
GDF11-202ENST00000546799 SOGA1O94964 1423 aa35.52■■■■□ 3.28
GDF11-202ENST00000546799 OSCARQ8IYS5 282 aa35.47■■■■□ 3.27
GDF11-202ENST00000546799 TDRD9Q8NDG6 1382 aaKnown RBP35.42■■■■□ 3.26
GDF11-202ENST00000546799 WDR97A6NE52 1622 aa35.31■■■■□ 3.24
GDF11-202ENST00000546799 SYNJ1O43426 1573 aa35.25■■■■□ 3.23
GDF11-202ENST00000546799 CHD1O14646 1710 aa35.25■■■■□ 3.23
GDF11-202ENST00000546799 WRNQ14191 1432 aaPredicted RBP eCLIP35.23■■■■□ 3.23
GDF11-202ENST00000546799 TOP2BQ02880 1626 aa35.22■■■■□ 3.23
GDF11-202ENST00000546799 BIVM-ERCC5R4GMW8 1640 aa35.21■■■■□ 3.23
GDF11-202ENST00000546799 ABCA10Q8WWZ4 1543 aa35.18■■■■□ 3.22
GDF11-202ENST00000546799 SNAPC4Q5SXM2 1469 aa35.18■■■■□ 3.22
GDF11-202ENST00000546799 GRIN2BQ13224 1484 aa35.13■■■■□ 3.21
GDF11-202ENST00000546799 FBLN2P98095 1184 aa35.11■■■■□ 3.21
GDF11-202ENST00000546799 ABCA5Q8WWZ7 1642 aa35.1■■■■□ 3.21
GDF11-202ENST00000546799 GAPVD1Q14C86 1478 aa35.1■■■■□ 3.21
GDF11-202ENST00000546799 PBRM1Q86U86 1689 aa35.07■■■■□ 3.2
GDF11-202ENST00000546799 MAGI1Q96QZ7 1491 aaPredicted RBP35.06■■■■□ 3.2
GDF11-202ENST00000546799 TRIM41Q8WV44 630 aa35.04■■■■□ 3.2
GDF11-202ENST00000546799 RIMBP3CA6NJZ7 1639 aa35.02■■■■□ 3.2
GDF11-202ENST00000546799 RIMBP3BA6NNM3 1639 aa35.02■■■■□ 3.2
GDF11-202ENST00000546799 RIMBP3Q9UFD9 1639 aa35.02■■■■□ 3.2
GDF11-202ENST00000546799 SYNJ2O15056 1496 aa34.96■■■■□ 3.19
GDF11-202ENST00000546799 ARHGEF11O15085 1522 aa34.96■■■■□ 3.19
GDF11-202ENST00000546799 CHMP7Q8WUX9 453 aaPredicted RBP34.94■■■■□ 3.18
GDF11-202ENST00000546799 CLASP1Q7Z460 1538 aa34.87■■■■□ 3.17
GDF11-202ENST00000546799 ADAMTS12P58397 1594 aa34.78■■■■□ 3.16
GDF11-202ENST00000546799 ERICH3Q5RHP9 1530 aa34.73■■■■□ 3.15
GDF11-202ENST00000546799 GRIN2AQ12879 1464 aa34.71■■■■□ 3.15
GDF11-202ENST00000546799 ARAP1Q96P48 1450 aa34.7■■■■□ 3.15
GDF11-202ENST00000546799 FHAD1B1AJZ9 1412 aa34.66■■■■□ 3.14
GDF11-202ENST00000546799 CYB5RLQ6IPT4 315 aa34.64■■■■□ 3.14
GDF11-202ENST00000546799 CEP170Q5SW79 1584 aa34.62■■■■□ 3.13
GDF11-202ENST00000546799 NUP160Q12769 1436 aa34.59■■■■□ 3.13
GDF11-202ENST00000546799 IGF1RP08069 1367 aa34.49■■■■□ 3.11
GDF11-202ENST00000546799 KIF27Q86VH2 1401 aa34.47■■■■□ 3.11
GDF11-202ENST00000546799 ERCC6L2Q5T890 1561 aa34.45■■■■□ 3.1
GDF11-202ENST00000546799 SHROOM2Q13796 1616 aa34.38■■■■□ 3.09
GDF11-202ENST00000546799 CUL7Q14999 1698 aa34.32■■■■□ 3.08
GDF11-202ENST00000546799 RUSC2Q8N2Y8 1516 aa34.29■■■■□ 3.08
GDF11-202ENST00000546799 CARMIL1Q5VZK9 1371 aa34.22■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms