RNA–Protein interactions for RNA: ENST00000546526.5

C12orf42-202, Transcript of chromosome 12 open reading frame 42, humanhuman

TSL 3

Gene C12orf42, Length 866 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf42-202ENST00000546526 NISCHQ9Y2I1 1504 aa51.64■■■■■ 5.86
C12orf42-202ENST00000546526 CCDC180Q9P1Z9 1646 aa46.32■■■■■ 5
C12orf42-202ENST00000546526 ABCC9O60706 1549 aa46.11■■■■■ 4.97
C12orf42-202ENST00000546526 RB1CC1Q8TDY2 1594 aa43.97■■■■■ 4.63
C12orf42-202ENST00000546526 NACADO15069 1562 aa43.69■■■■■ 4.58
C12orf42-202ENST00000546526 DCAF8L2P0C7V8 631 aa43.5■■■■■ 4.55
C12orf42-202ENST00000546526 MYO15BQ96JP2 1530 aa43.11■■■■■ 4.49
C12orf42-202ENST00000546526 UNC13AQ9UPW8 1703 aa43.11■■■■■ 4.49
C12orf42-202ENST00000546526 DNAJC5BQ9UF47 199 aa43.06■■■■■ 4.48
C12orf42-202ENST00000546526 PABPN1Q86U42 306 aaKnown RBP eCLIP42.93■■■■■ 4.46
C12orf42-202ENST00000546526 ZCCHC6Q5VYS8 1495 aaKnown RBP42.83■■■■■ 4.45
C12orf42-202ENST00000546526 BICRAQ9NZM4 1560 aa42.69■■■■■ 4.43
C12orf42-202ENST00000546526 DCAF1Q9Y4B6 1507 aa42.64■■■■■ 4.42
C12orf42-202ENST00000546526 SCRIBQ14160 1630 aa42.22■■■■■ 4.35
C12orf42-202ENST00000546526 SHROOM4Q9ULL8 1493 aa42.08■■■■■ 4.33
C12orf42-202ENST00000546526 CC2D2AQ9P2K1 1620 aa41.69■■■■■ 4.26
C12orf42-202ENST00000546526 EIF4G1Q04637 1599 aaKnown RBP41.63■■■■■ 4.25
C12orf42-202ENST00000546526 CECR2Q9BXF3 1484 aa41.5■■■■■ 4.23
C12orf42-202ENST00000546526 NCAPD3P42695 1498 aa40.3■■■■■ 4.04
C12orf42-202ENST00000546526 SMARCA4P51532 1647 aa40.28■■■■■ 4.04
C12orf42-202ENST00000546526 ATAD2BQ9ULI0 1458 aa40.22■■■■■ 4.03
C12orf42-202ENST00000546526 SMARCA2P51531 1590 aa40.14■■■■■ 4.02
C12orf42-202ENST00000546526 BAZ1AQ9NRL2 1556 aaPredicted RBP40.07■■■■■ 4.01
C12orf42-202ENST00000546526 HMGXB3Q12766 1538 aa40.06■■■■■ 4
C12orf42-202ENST00000546526 BAZ1BQ9UIG0 1483 aaKnown RBP39.86■■■■□ 3.97
C12orf42-202ENST00000546526 PEG3Q9GZU2 1588 aa39.85■■■■□ 3.97
C12orf42-202ENST00000546526 MROH2BQ7Z745 1585 aa39.8■■■■□ 3.96
C12orf42-202ENST00000546526 ERCC6Q03468 1493 aa39.79■■■■□ 3.96
C12orf42-202ENST00000546526 NESP48681 1621 aa39.67■■■■□ 3.94
C12orf42-202ENST00000546526 CUX2O14529 1486 aa39.63■■■■□ 3.94
C12orf42-202ENST00000546526 LAMC3Q9Y6N6 1575 aa39.42■■■■□ 3.9
C12orf42-202ENST00000546526 DNAJC5Q9H3Z4 198 aa39.39■■■■□ 3.9
C12orf42-202ENST00000546526 WIZO95785 1651 aa39.38■■■■□ 3.9
C12orf42-202ENST00000546526 THOC2Q8NI27 1593 aaKnown RBP39.26■■■■□ 3.88
C12orf42-202ENST00000546526 KIF21AQ7Z4S6 1674 aa39.24■■■■□ 3.87
C12orf42-202ENST00000546526 PDS5BQ9NTI5 1447 aa39.14■■■■□ 3.86
C12orf42-202ENST00000546526 CADPSQ9ULU8 1353 aa39.08■■■■□ 3.85
C12orf42-202ENST00000546526 RSF1Q96T23 1441 aaPredicted RBP39.01■■■■□ 3.84
C12orf42-202ENST00000546526 TOP2AP11388 1531 aaKnown RBP38.85■■■■□ 3.81
C12orf42-202ENST00000546526 MRC2Q9UBG0 1479 aa38.82■■■■□ 3.81
C12orf42-202ENST00000546526 WDR62O43379 1518 aa38.73■■■■□ 3.79
C12orf42-202ENST00000546526 CEP164Q9UPV0 1460 aa38.7■■■■□ 3.79
C12orf42-202ENST00000546526 CFTRP13569 1480 aa38.69■■■■□ 3.78
C12orf42-202ENST00000546526 FANCD2Q9BXW9 1451 aa38.67■■■■□ 3.78
C12orf42-202ENST00000546526 PRDM2Q13029 1718 aa38.46■■■■□ 3.75
C12orf42-202ENST00000546526 CCDC88BA6NC98 1476 aa38.4■■■■□ 3.74
C12orf42-202ENST00000546526 URB2Q14146 1524 aaKnown RBP38.36■■■■□ 3.73
C12orf42-202ENST00000546526 TOPBP1Q92547 1522 aa37.97■■■■□ 3.67
C12orf42-202ENST00000546526 IFT140Q96RY7 1462 aa37.9■■■■□ 3.66
C12orf42-202ENST00000546526 ABCC8Q09428 1581 aa37.87■■■■□ 3.65
C12orf42-202ENST00000546526 DNMBPQ6XZF7 1577 aa37.86■■■■□ 3.65
C12orf42-202ENST00000546526 ZNF608Q9ULD9 1512 aaPredicted RBP37.86■■■■□ 3.65
C12orf42-202ENST00000546526 OSCARQ8IYS5 282 aa37.83■■■■□ 3.65
C12orf42-202ENST00000546526 TRIM41Q8WV44 630 aa37.78■■■■□ 3.64
C12orf42-202ENST00000546526 EIF4G3O43432 1585 aaKnown RBP37.69■■■■□ 3.62
C12orf42-202ENST00000546526 TARBP1Q13395 1621 aaKnown RBP37.65■■■■□ 3.62
C12orf42-202ENST00000546526 POLA1P09884 1462 aaPredicted RBP37.58■■■■□ 3.61
C12orf42-202ENST00000546526 AQRO60306 1485 aaKnown RBP eCLIP37.52■■■■□ 3.6
C12orf42-202ENST00000546526 RAD54L2Q9Y4B4 1467 aa37.45■■■■□ 3.59
C12orf42-202ENST00000546526 CHD1O14646 1710 aa37.44■■■■□ 3.58
C12orf42-202ENST00000546526 SUPT5HO00267 1087 aaKnown RBP37.43■■■■□ 3.58
C12orf42-202ENST00000546526 RIMBP3CA6NJZ7 1639 aa37.42■■■■□ 3.58
C12orf42-202ENST00000546526 RIMBP3BA6NNM3 1639 aa37.42■■■■□ 3.58
C12orf42-202ENST00000546526 RIMBP3Q9UFD9 1639 aa37.42■■■■□ 3.58
C12orf42-202ENST00000546526 SOGA1O94964 1423 aa37.39■■■■□ 3.58
C12orf42-202ENST00000546526 CUX1P39880 1505 aa37.39■■■■□ 3.58
C12orf42-202ENST00000546526 FGD5Q6ZNL6 1462 aa37.39■■■■□ 3.58
C12orf42-202ENST00000546526 TDRD9Q8NDG6 1382 aaKnown RBP37.31■■■■□ 3.56
C12orf42-202ENST00000546526 ARHGEF11O15085 1522 aa37.28■■■■□ 3.56
C12orf42-202ENST00000546526 WDR97A6NE52 1622 aa37.25■■■■□ 3.55
C12orf42-202ENST00000546526 FBLN2P98095 1184 aa37.23■■■■□ 3.55
C12orf42-202ENST00000546526 SNAPC4Q5SXM2 1469 aa37.16■■■■□ 3.54
C12orf42-202ENST00000546526 GRIN2BQ13224 1484 aa37.06■■■■□ 3.52
C12orf42-202ENST00000546526 MAGI1Q96QZ7 1491 aaPredicted RBP37.05■■■■□ 3.52
C12orf42-202ENST00000546526 PBRM1Q86U86 1689 aa37.04■■■■□ 3.52
C12orf42-202ENST00000546526 CHMP7Q8WUX9 453 aaPredicted RBP36.97■■■■□ 3.51
C12orf42-202ENST00000546526 GAPVD1Q14C86 1478 aa36.96■■■■□ 3.51
C12orf42-202ENST00000546526 CYB5RLQ6IPT4 315 aa36.96■■■■□ 3.51
C12orf42-202ENST00000546526 ABCA10Q8WWZ4 1543 aa36.95■■■■□ 3.51
C12orf42-202ENST00000546526 SYNJ1O43426 1573 aa36.93■■■■□ 3.5
C12orf42-202ENST00000546526 CLASP1Q7Z460 1538 aa36.93■■■■□ 3.5
C12orf42-202ENST00000546526 ABCA5Q8WWZ7 1642 aa36.92■■■■□ 3.5
C12orf42-202ENST00000546526 SYNJ2O15056 1496 aa36.92■■■■□ 3.5
C12orf42-202ENST00000546526 ARAP1Q96P48 1450 aa36.92■■■■□ 3.5
C12orf42-202ENST00000546526 BIVM-ERCC5R4GMW8 1640 aa36.88■■■■□ 3.49
C12orf42-202ENST00000546526 TOP2BQ02880 1626 aa36.85■■■■□ 3.49
C12orf42-202ENST00000546526 WRNQ14191 1432 aaPredicted RBP eCLIP36.82■■■■□ 3.48
C12orf42-202ENST00000546526 ADAMTS12P58397 1594 aa36.64■■■■□ 3.46
C12orf42-202ENST00000546526 GRIN2AQ12879 1464 aa36.6■■■■□ 3.45
C12orf42-202ENST00000546526 ERICH3Q5RHP9 1530 aa36.5■■■■□ 3.43
C12orf42-202ENST00000546526 TRHP20396 242 aaPredicted RBP36.5■■■■□ 3.43
C12orf42-202ENST00000546526 CEP170Q5SW79 1584 aa36.49■■■■□ 3.43
C12orf42-202ENST00000546526 FHAD1B1AJZ9 1412 aa36.49■■■■□ 3.43
C12orf42-202ENST00000546526 NUP160Q12769 1436 aa36.45■■■■□ 3.43
C12orf42-202ENST00000546526 ERCC6L2Q5T890 1561 aa36.39■■■■□ 3.42
C12orf42-202ENST00000546526 SHROOM2Q13796 1616 aa36.32■■■■□ 3.4
C12orf42-202ENST00000546526 RUSC2Q8N2Y8 1516 aa36.12■■■■□ 3.37
C12orf42-202ENST00000546526 PRG4Q92954 1404 aaPredicted RBP36.09■■■■□ 3.37
C12orf42-202ENST00000546526 KIF27Q86VH2 1401 aa36.08■■■■□ 3.37
C12orf42-202ENST00000546526 JPH4Q96JJ6 628 aa36.06■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms