RNA–Protein interactions for RNA: ENST00000546489.5

CDK4-203, Transcript of cyclin dependent kinase 4, humanhuman

TSL 5

Gene CDK4, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-203ENST00000546489 NISCHQ9Y2I1 1504 aa31.63■■■□□ 2.65
CDK4-203ENST00000546489 CCDC180Q9P1Z9 1646 aa28.11■■■□□ 2.09
CDK4-203ENST00000546489 ABCC9O60706 1549 aa27.16■■□□□ 1.94
CDK4-203ENST00000546489 ZCCHC6Q5VYS8 1495 aaKnown RBP26.4■■□□□ 1.82
CDK4-203ENST00000546489 NACADO15069 1562 aa26.32■■□□□ 1.8
CDK4-203ENST00000546489 RB1CC1Q8TDY2 1594 aa26.29■■□□□ 1.8
CDK4-203ENST00000546489 MYO15BQ96JP2 1530 aa26.25■■□□□ 1.79
CDK4-203ENST00000546489 DCAF1Q9Y4B6 1507 aa26.22■■□□□ 1.79
CDK4-203ENST00000546489 DCAF8L2P0C7V8 631 aa26.2■■□□□ 1.78
CDK4-203ENST00000546489 UNC13AQ9UPW8 1703 aa25.81■■□□□ 1.72
CDK4-203ENST00000546489 SCRIBQ14160 1630 aa25.59■■□□□ 1.69
CDK4-203ENST00000546489 BICRAQ9NZM4 1560 aa25.51■■□□□ 1.67
CDK4-203ENST00000546489 PABPN1Q86U42 306 aaKnown RBP eCLIP25.36■■□□□ 1.65
CDK4-203ENST00000546489 SHROOM4Q9ULL8 1493 aa25.25■■□□□ 1.63
CDK4-203ENST00000546489 EIF4G1Q04637 1599 aaKnown RBP24.8■■□□□ 1.56
CDK4-203ENST00000546489 DNAJC5BQ9UF47 199 aa24.71■■□□□ 1.55
CDK4-203ENST00000546489 CC2D2AQ9P2K1 1620 aa24.65■■□□□ 1.54
CDK4-203ENST00000546489 CECR2Q9BXF3 1484 aa24.58■■□□□ 1.53
CDK4-203ENST00000546489 SMARCA4P51532 1647 aa24.53■■□□□ 1.52
CDK4-203ENST00000546489 BAZ1AQ9NRL2 1556 aaPredicted RBP24.51■■□□□ 1.51
CDK4-203ENST00000546489 MROH2BQ7Z745 1585 aa24.37■■□□□ 1.49
CDK4-203ENST00000546489 SMARCA2P51531 1590 aa24.3■■□□□ 1.48
CDK4-203ENST00000546489 PEG3Q9GZU2 1588 aa24.3■■□□□ 1.48
CDK4-203ENST00000546489 ATAD2BQ9ULI0 1458 aa24.29■■□□□ 1.48
CDK4-203ENST00000546489 NCAPD3P42695 1498 aa24.26■■□□□ 1.47
CDK4-203ENST00000546489 HMGXB3Q12766 1538 aa24.19■■□□□ 1.46
CDK4-203ENST00000546489 WIZO95785 1651 aa24.15■■□□□ 1.46
CDK4-203ENST00000546489 RSF1Q96T23 1441 aaPredicted RBP24.14■■□□□ 1.45
CDK4-203ENST00000546489 BAZ1BQ9UIG0 1483 aaKnown RBP24.1■■□□□ 1.45
CDK4-203ENST00000546489 TOP2AP11388 1531 aaKnown RBP23.89■■□□□ 1.42
CDK4-203ENST00000546489 LAMC3Q9Y6N6 1575 aa23.62■■□□□ 1.37
CDK4-203ENST00000546489 SUPT5HO00267 1087 aaKnown RBP23.61■■□□□ 1.37
CDK4-203ENST00000546489 NESP48681 1621 aa23.59■■□□□ 1.37
CDK4-203ENST00000546489 CCDC88BA6NC98 1476 aa23.58■■□□□ 1.37
CDK4-203ENST00000546489 CADPSQ9ULU8 1353 aa23.52■■□□□ 1.36
CDK4-203ENST00000546489 CFTRP13569 1480 aa23.46■■□□□ 1.35
CDK4-203ENST00000546489 PRDM2Q13029 1718 aa23.46■■□□□ 1.35
CDK4-203ENST00000546489 KIF21AQ7Z4S6 1674 aa23.41■■□□□ 1.34
CDK4-203ENST00000546489 ERCC6Q03468 1493 aa23.39■■□□□ 1.34
CDK4-203ENST00000546489 PDS5BQ9NTI5 1447 aa23.39■■□□□ 1.33
CDK4-203ENST00000546489 FANCD2Q9BXW9 1451 aa23.27■■□□□ 1.32
CDK4-203ENST00000546489 THOC2Q8NI27 1593 aaKnown RBP23.26■■□□□ 1.31
CDK4-203ENST00000546489 CEP164Q9UPV0 1460 aa23.23■■□□□ 1.31
CDK4-203ENST00000546489 MRC2Q9UBG0 1479 aa23.15■■□□□ 1.3
CDK4-203ENST00000546489 WDR62O43379 1518 aa23.11■■□□□ 1.29
CDK4-203ENST00000546489 CUX2O14529 1486 aa23.11■■□□□ 1.29
CDK4-203ENST00000546489 URB2Q14146 1524 aaKnown RBP23.03■■□□□ 1.28
CDK4-203ENST00000546489 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
CDK4-203ENST00000546489 DNMBPQ6XZF7 1577 aa22.96■■□□□ 1.27
CDK4-203ENST00000546489 TOPBP1Q92547 1522 aa22.94■■□□□ 1.26
CDK4-203ENST00000546489 CUX1P39880 1505 aa22.85■■□□□ 1.25
CDK4-203ENST00000546489 BIVM-ERCC5R4GMW8 1640 aa22.78■■□□□ 1.24
CDK4-203ENST00000546489 POLA1P09884 1462 aaPredicted RBP22.76■■□□□ 1.23
CDK4-203ENST00000546489 WRNQ14191 1432 aaPredicted RBP eCLIP22.75■■□□□ 1.23
CDK4-203ENST00000546489 TOP2BQ02880 1626 aa22.75■■□□□ 1.23
CDK4-203ENST00000546489 SYNJ1O43426 1573 aa22.73■■□□□ 1.23
CDK4-203ENST00000546489 FGD5Q6ZNL6 1462 aa22.73■■□□□ 1.23
CDK4-203ENST00000546489 IFT140Q96RY7 1462 aa22.73■■□□□ 1.23
CDK4-203ENST00000546489 TARBP1Q13395 1621 aaKnown RBP22.71■■□□□ 1.23
CDK4-203ENST00000546489 SOGA1O94964 1423 aa22.64■■□□□ 1.21
CDK4-203ENST00000546489 WDR97A6NE52 1622 aa22.64■■□□□ 1.21
CDK4-203ENST00000546489 RAD54L2Q9Y4B4 1467 aa22.63■■□□□ 1.21
CDK4-203ENST00000546489 ZNF608Q9ULD9 1512 aaPredicted RBP22.6■■□□□ 1.21
CDK4-203ENST00000546489 EIF4G3O43432 1585 aaKnown RBP22.58■■□□□ 1.2
CDK4-203ENST00000546489 ABCA10Q8WWZ4 1543 aa22.53■■□□□ 1.2
CDK4-203ENST00000546489 AQRO60306 1485 aaKnown RBP eCLIP22.48■■□□□ 1.199e-10■■■■■ 41.2
CDK4-203ENST00000546489 ABCA5Q8WWZ7 1642 aa22.46■■□□□ 1.19
CDK4-203ENST00000546489 TDRD9Q8NDG6 1382 aaKnown RBP22.45■■□□□ 1.18
CDK4-203ENST00000546489 PBRM1Q86U86 1689 aa22.44■■□□□ 1.18
CDK4-203ENST00000546489 GAPVD1Q14C86 1478 aa22.4■■□□□ 1.18
CDK4-203ENST00000546489 GRIN2BQ13224 1484 aa22.36■■□□□ 1.17
CDK4-203ENST00000546489 TRIM41Q8WV44 630 aa22.32■■□□□ 1.16
CDK4-203ENST00000546489 MAGI1Q96QZ7 1491 aaPredicted RBP22.3■■□□□ 1.16
CDK4-203ENST00000546489 CHD1O14646 1710 aa22.3■■□□□ 1.16
CDK4-203ENST00000546489 SNAPC4Q5SXM2 1469 aa22.29■■□□□ 1.16
CDK4-203ENST00000546489 ERICH3Q5RHP9 1530 aa22.28■■□□□ 1.16
CDK4-203ENST00000546489 KIF27Q86VH2 1401 aa22.26■■□□□ 1.15
CDK4-203ENST00000546489 ADAMTS12P58397 1594 aa22.21■■□□□ 1.15
CDK4-203ENST00000546489 SYNJ2O15056 1496 aa22.2■■□□□ 1.14
CDK4-203ENST00000546489 CHIC1Q5VXU3 224 aa22.19■■□□□ 1.14
CDK4-203ENST00000546489 CUL7Q14999 1698 aa22.16■■□□□ 1.14
CDK4-203ENST00000546489 FHAD1B1AJZ9 1412 aa22.14■■□□□ 1.13
CDK4-203ENST00000546489 RUSC2Q8N2Y8 1516 aa22.13■■□□□ 1.13
CDK4-203ENST00000546489 OSCARQ8IYS5 282 aa22.13■■□□□ 1.13
CDK4-203ENST00000546489 IGF1RP08069 1367 aa22.12■■□□□ 1.13
CDK4-203ENST00000546489 FBLN2P98095 1184 aa22.11■■□□□ 1.13
CDK4-203ENST00000546489 CHMP7Q8WUX9 453 aaPredicted RBP22.11■■□□□ 1.13
CDK4-203ENST00000546489 GRIN2AQ12879 1464 aa22.09■■□□□ 1.13
CDK4-203ENST00000546489 DNAJC5Q9H3Z4 198 aa22.09■■□□□ 1.13
CDK4-203ENST00000546489 CLASP1Q7Z460 1538 aa22.01■■□□□ 1.11
CDK4-203ENST00000546489 CARMIL1Q5VZK9 1371 aa22■■□□□ 1.11
CDK4-203ENST00000546489 CEP170Q5SW79 1584 aa21.99■■□□□ 1.11
CDK4-203ENST00000546489 EEA1Q15075 1411 aa21.99■■□□□ 1.11
CDK4-203ENST00000546489 NUP160Q12769 1436 aa21.98■■□□□ 1.11
CDK4-203ENST00000546489 RAPGEF2Q9Y4G8 1499 aa21.92■■□□□ 1.1
CDK4-203ENST00000546489 PRXQ9BXM0 1461 aa21.9■■□□□ 1.1
CDK4-203ENST00000546489 CSRNP3Q8WYN3 585 aa21.89■■□□□ 1.09
CDK4-203ENST00000546489 SHROOM2Q13796 1616 aa21.86■■□□□ 1.09
CDK4-203ENST00000546489 RIMBP3CA6NJZ7 1639 aa21.84■■□□□ 1.09
CDK4-203ENST00000546489 RIMBP3BA6NNM3 1639 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms