RNA–Protein interactions for RNA: ENST00000546152.1

PRPF19-207, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 5

Gene PRPF19, Length 814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-207ENST00000546152 NISCHQ9Y2I1 1504 aa49.43■■■■■ 5.5
PRPF19-207ENST00000546152 CCDC180Q9P1Z9 1646 aa44.06■■■■■ 4.64
PRPF19-207ENST00000546152 ABCC9O60706 1549 aa43.49■■■■■ 4.55
PRPF19-207ENST00000546152 RB1CC1Q8TDY2 1594 aa41.65■■■■■ 4.26
PRPF19-207ENST00000546152 NACADO15069 1562 aa41.52■■■■■ 4.24
PRPF19-207ENST00000546152 DCAF8L2P0C7V8 631 aa41.42■■■■■ 4.22
PRPF19-207ENST00000546152 MYO15BQ96JP2 1530 aa41.17■■■■■ 4.18
PRPF19-207ENST00000546152 ZCCHC6Q5VYS8 1495 aaKnown RBP41.09■■■■■ 4.17
PRPF19-207ENST00000546152 DCAF1Q9Y4B6 1507 aa40.87■■■■■ 4.13
PRPF19-207ENST00000546152 UNC13AQ9UPW8 1703 aa40.7■■■■■ 4.11
PRPF19-207ENST00000546152 PABPN1Q86U42 306 aaKnown RBP eCLIP40.6■■■■■ 4.09
PRPF19-207ENST00000546152 BICRAQ9NZM4 1560 aa40.46■■■■■ 4.07
PRPF19-207ENST00000546152 DNAJC5BQ9UF47 199 aa40.31■■■■■ 4.04
PRPF19-207ENST00000546152 SCRIBQ14160 1630 aa40.19■■■■■ 4.02
PRPF19-207ENST00000546152 SHROOM4Q9ULL8 1493 aa39.94■■■■□ 3.98
PRPF19-207ENST00000546152 EIF4G1Q04637 1599 aaKnown RBP39.38■■■■□ 3.9
PRPF19-207ENST00000546152 CC2D2AQ9P2K1 1620 aa39.31■■■■□ 3.88
PRPF19-207ENST00000546152 CECR2Q9BXF3 1484 aa39.11■■■■□ 3.85
PRPF19-207ENST00000546152 SMARCA4P51532 1647 aa38.41■■■■□ 3.74
PRPF19-207ENST00000546152 NCAPD3P42695 1498 aa38.35■■■■□ 3.73
PRPF19-207ENST00000546152 ATAD2BQ9ULI0 1458 aa38.32■■■■□ 3.72
PRPF19-207ENST00000546152 BAZ1AQ9NRL2 1556 aaPredicted RBP38.31■■■■□ 3.72
PRPF19-207ENST00000546152 SMARCA2P51531 1590 aa38.22■■■■□ 3.71
PRPF19-207ENST00000546152 MROH2BQ7Z745 1585 aa38.1■■■■□ 3.69
PRPF19-207ENST00000546152 HMGXB3Q12766 1538 aa38.1■■■■□ 3.69
PRPF19-207ENST00000546152 PEG3Q9GZU2 1588 aa38.06■■■■□ 3.68
PRPF19-207ENST00000546152 BAZ1BQ9UIG0 1483 aaKnown RBP37.95■■■■□ 3.67
PRPF19-207ENST00000546152 WIZO95785 1651 aa37.66■■■■□ 3.62
PRPF19-207ENST00000546152 NESP48681 1621 aa37.55■■■■□ 3.6
PRPF19-207ENST00000546152 RSF1Q96T23 1441 aaPredicted RBP37.54■■■■□ 3.6
PRPF19-207ENST00000546152 ERCC6Q03468 1493 aa37.47■■■■□ 3.59
PRPF19-207ENST00000546152 LAMC3Q9Y6N6 1575 aa37.37■■■■□ 3.57
PRPF19-207ENST00000546152 CUX2O14529 1486 aa37.23■■■■□ 3.55
PRPF19-207ENST00000546152 TOP2AP11388 1531 aaKnown RBP37.21■■■■□ 3.55
PRPF19-207ENST00000546152 CADPSQ9ULU8 1353 aa37.2■■■■□ 3.55
PRPF19-207ENST00000546152 PDS5BQ9NTI5 1447 aa37.12■■■■□ 3.53
PRPF19-207ENST00000546152 KIF21AQ7Z4S6 1674 aa37.05■■■■□ 3.52
PRPF19-207ENST00000546152 THOC2Q8NI27 1593 aaKnown RBP37.04■■■■□ 3.52
PRPF19-207ENST00000546152 CFTRP13569 1480 aa36.92■■■■□ 3.5
PRPF19-207ENST00000546152 CCDC88BA6NC98 1476 aa36.82■■■■□ 3.48
PRPF19-207ENST00000546152 FANCD2Q9BXW9 1451 aa36.77■■■■□ 3.48
PRPF19-207ENST00000546152 MRC2Q9UBG0 1479 aa36.77■■■■□ 3.48
PRPF19-207ENST00000546152 CEP164Q9UPV0 1460 aa36.75■■■■□ 3.47
PRPF19-207ENST00000546152 WDR62O43379 1518 aa36.67■■■■□ 3.46
PRPF19-207ENST00000546152 DNAJC5Q9H3Z4 198 aa36.55■■■■□ 3.44
PRPF19-207ENST00000546152 PRDM2Q13029 1718 aa36.54■■■■□ 3.44
PRPF19-207ENST00000546152 URB2Q14146 1524 aaKnown RBP36.45■■■■□ 3.43
PRPF19-207ENST00000546152 SUPT5HO00267 1087 aaKnown RBP36.29■■■■□ 3.4
PRPF19-207ENST00000546152 TOPBP1Q92547 1522 aa36.15■■■■□ 3.38
PRPF19-207ENST00000546152 ABCC8Q09428 1581 aa36.1■■■■□ 3.37
PRPF19-207ENST00000546152 DNMBPQ6XZF7 1577 aa36.06■■■■□ 3.36
PRPF19-207ENST00000546152 IFT140Q96RY7 1462 aa35.99■■■■□ 3.35
PRPF19-207ENST00000546152 ZNF608Q9ULD9 1512 aaPredicted RBP35.9■■■■□ 3.34
PRPF19-207ENST00000546152 POLA1P09884 1462 aaPredicted RBP35.82■■■■□ 3.32
PRPF19-207ENST00000546152 TARBP1Q13395 1621 aaKnown RBP35.79■■■■□ 3.32
PRPF19-207ENST00000546152 CUX1P39880 1505 aa35.76■■■■□ 3.31
PRPF19-207ENST00000546152 EIF4G3O43432 1585 aaKnown RBP35.7■■■■□ 3.31
PRPF19-207ENST00000546152 RAD54L2Q9Y4B4 1467 aa35.68■■■■□ 3.3
PRPF19-207ENST00000546152 FGD5Q6ZNL6 1462 aa35.67■■■■□ 3.3
PRPF19-207ENST00000546152 SOGA1O94964 1423 aa35.66■■■■□ 3.3
PRPF19-207ENST00000546152 AQRO60306 1485 aaKnown RBP eCLIP35.65■■■■□ 3.34e-7■■■■■ 26.9
PRPF19-207ENST00000546152 OSCARQ8IYS5 282 aa35.64■■■■□ 3.3
PRPF19-207ENST00000546152 TDRD9Q8NDG6 1382 aaKnown RBP35.52■■■■□ 3.28
PRPF19-207ENST00000546152 WDR97A6NE52 1622 aa35.44■■■■□ 3.26
PRPF19-207ENST00000546152 WRNQ14191 1432 aaPredicted RBP eCLIP35.38■■■■□ 3.25
PRPF19-207ENST00000546152 TOP2BQ02880 1626 aa35.33■■■■□ 3.25
PRPF19-207ENST00000546152 BIVM-ERCC5R4GMW8 1640 aa35.33■■■■□ 3.25
PRPF19-207ENST00000546152 SYNJ1O43426 1573 aa35.32■■■■□ 3.24
PRPF19-207ENST00000546152 ABCA10Q8WWZ4 1543 aa35.32■■■■□ 3.24
PRPF19-207ENST00000546152 CHD1O14646 1710 aa35.31■■■■□ 3.24
PRPF19-207ENST00000546152 SNAPC4Q5SXM2 1469 aa35.29■■■■□ 3.24
PRPF19-207ENST00000546152 GRIN2BQ13224 1484 aa35.28■■■■□ 3.24
PRPF19-207ENST00000546152 FBLN2P98095 1184 aa35.26■■■■□ 3.24
PRPF19-207ENST00000546152 GAPVD1Q14C86 1478 aa35.24■■■■□ 3.23
PRPF19-207ENST00000546152 MAGI1Q96QZ7 1491 aaPredicted RBP35.22■■■■□ 3.23
PRPF19-207ENST00000546152 ABCA5Q8WWZ7 1642 aa35.2■■■■□ 3.23
PRPF19-207ENST00000546152 TRIM41Q8WV44 630 aa35.16■■■■□ 3.22
PRPF19-207ENST00000546152 PBRM1Q86U86 1689 aa35.16■■■■□ 3.22
PRPF19-207ENST00000546152 CHMP7Q8WUX9 453 aaPredicted RBP35.11■■■■□ 3.21
PRPF19-207ENST00000546152 RIMBP3CA6NJZ7 1639 aa35.1■■■■□ 3.21
PRPF19-207ENST00000546152 RIMBP3BA6NNM3 1639 aa35.1■■■■□ 3.21
PRPF19-207ENST00000546152 RIMBP3Q9UFD9 1639 aa35.1■■■■□ 3.21
PRPF19-207ENST00000546152 SYNJ2O15056 1496 aa35.09■■■■□ 3.21
PRPF19-207ENST00000546152 ARHGEF11O15085 1522 aa35.06■■■■□ 3.2
PRPF19-207ENST00000546152 CLASP1Q7Z460 1538 aa34.96■■■■□ 3.19
PRPF19-207ENST00000546152 ADAMTS12P58397 1594 aa34.88■■■■□ 3.17
PRPF19-207ENST00000546152 ERICH3Q5RHP9 1530 aa34.87■■■■□ 3.17
PRPF19-207ENST00000546152 GRIN2AQ12879 1464 aa34.83■■■■□ 3.17
PRPF19-207ENST00000546152 FHAD1B1AJZ9 1412 aa34.81■■■■□ 3.16
PRPF19-207ENST00000546152 ARAP1Q96P48 1450 aa34.77■■■■□ 3.16
PRPF19-207ENST00000546152 CYB5RLQ6IPT4 315 aa34.76■■■■□ 3.16
PRPF19-207ENST00000546152 NUP160Q12769 1436 aa34.71■■■■□ 3.15
PRPF19-207ENST00000546152 CEP170Q5SW79 1584 aa34.68■■■■□ 3.14
PRPF19-207ENST00000546152 KIF27Q86VH2 1401 aa34.65■■■■□ 3.14
PRPF19-207ENST00000546152 IGF1RP08069 1367 aa34.61■■■■□ 3.13
PRPF19-207ENST00000546152 SHROOM2Q13796 1616 aa34.48■■■■□ 3.11
PRPF19-207ENST00000546152 ERCC6L2Q5T890 1561 aa34.46■■■■□ 3.11
PRPF19-207ENST00000546152 CUL7Q14999 1698 aa34.46■■■■□ 3.11
PRPF19-207ENST00000546152 RUSC2Q8N2Y8 1516 aa34.38■■■■□ 3.09
PRPF19-207ENST00000546152 CARMIL1Q5VZK9 1371 aa34.36■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms