RNA–Protein interactions for RNA: ENST00000546076.5

TSPAN11-204, Transcript of tetraspanin 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN11, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN11-204ENST00000546076 NISCHQ9Y2I1 1504 aa38.32■■■■□ 3.72
TSPAN11-204ENST00000546076 ABCC9O60706 1549 aa34.92■■■■□ 3.18
TSPAN11-204ENST00000546076 CCDC180Q9P1Z9 1646 aa34.42■■■■□ 3.1
TSPAN11-204ENST00000546076 DNAJC5BQ9UF47 199 aa33.15■■■□□ 2.9
TSPAN11-204ENST00000546076 RB1CC1Q8TDY2 1594 aa33■■■□□ 2.87
TSPAN11-204ENST00000546076 NACADO15069 1562 aa32.69■■■□□ 2.82
TSPAN11-204ENST00000546076 DCAF8L2P0C7V8 631 aa32.63■■■□□ 2.81
TSPAN11-204ENST00000546076 PABPN1Q86U42 306 aaKnown RBP eCLIP32.53■■■□□ 2.8
TSPAN11-204ENST00000546076 UNC13AQ9UPW8 1703 aa32.19■■■□□ 2.74
TSPAN11-204ENST00000546076 MYO15BQ96JP2 1530 aa32.1■■■□□ 2.73
TSPAN11-204ENST00000546076 BICRAQ9NZM4 1560 aa32.07■■■□□ 2.72
TSPAN11-204ENST00000546076 ZCCHC6Q5VYS8 1495 aaKnown RBP31.66■■■□□ 2.66
TSPAN11-204ENST00000546076 DCAF1Q9Y4B6 1507 aa31.58■■■□□ 2.65
TSPAN11-204ENST00000546076 SHROOM4Q9ULL8 1493 aa31.54■■■□□ 2.64
TSPAN11-204ENST00000546076 CECR2Q9BXF3 1484 aa31.47■■■□□ 2.63
TSPAN11-204ENST00000546076 CC2D2AQ9P2K1 1620 aa31.47■■■□□ 2.63
TSPAN11-204ENST00000546076 SCRIBQ14160 1630 aa31.44■■■□□ 2.62
TSPAN11-204ENST00000546076 EIF4G1Q04637 1599 aaKnown RBP31.31■■■□□ 2.6
TSPAN11-204ENST00000546076 DNAJC5Q9H3Z4 198 aa30.64■■■□□ 2.5
TSPAN11-204ENST00000546076 NCAPD3P42695 1498 aa30.23■■■□□ 2.43
TSPAN11-204ENST00000546076 CUX2O14529 1486 aa30.18■■■□□ 2.42
TSPAN11-204ENST00000546076 ERCC6Q03468 1493 aa30.15■■■□□ 2.42
TSPAN11-204ENST00000546076 ATAD2BQ9ULI0 1458 aa30.11■■■□□ 2.41
TSPAN11-204ENST00000546076 SMARCA2P51531 1590 aa29.94■■■□□ 2.38
TSPAN11-204ENST00000546076 SMARCA4P51532 1647 aa29.93■■■□□ 2.38
TSPAN11-204ENST00000546076 HMGXB3Q12766 1538 aa29.91■■■□□ 2.38
TSPAN11-204ENST00000546076 NESP48681 1621 aa29.9■■■□□ 2.38
TSPAN11-204ENST00000546076 BAZ1BQ9UIG0 1483 aaKnown RBP29.77■■■□□ 2.36
TSPAN11-204ENST00000546076 BAZ1AQ9NRL2 1556 aaPredicted RBP29.73■■■□□ 2.35
TSPAN11-204ENST00000546076 PEG3Q9GZU2 1588 aa29.62■■■□□ 2.33
TSPAN11-204ENST00000546076 THOC2Q8NI27 1593 aaKnown RBP29.58■■■□□ 2.33
TSPAN11-204ENST00000546076 MROH2BQ7Z745 1585 aa29.55■■■□□ 2.32
TSPAN11-204ENST00000546076 LAMC3Q9Y6N6 1575 aa29.55■■■□□ 2.32
TSPAN11-204ENST00000546076 PDS5BQ9NTI5 1447 aa29.45■■■□□ 2.3
TSPAN11-204ENST00000546076 KIF21AQ7Z4S6 1674 aa29.4■■■□□ 2.3
TSPAN11-204ENST00000546076 CADPSQ9ULU8 1353 aa29.32■■■□□ 2.28
TSPAN11-204ENST00000546076 MRC2Q9UBG0 1479 aa29.21■■■□□ 2.27
TSPAN11-204ENST00000546076 TRIM41Q8WV44 630 aa29.2■■■□□ 2.26
TSPAN11-204ENST00000546076 WIZO95785 1651 aa29.14■■■□□ 2.26
TSPAN11-204ENST00000546076 WDR62O43379 1518 aa29.11■■■□□ 2.25
TSPAN11-204ENST00000546076 CEP164Q9UPV0 1460 aa29.02■■■□□ 2.24
TSPAN11-204ENST00000546076 FANCD2Q9BXW9 1451 aa28.97■■■□□ 2.23
TSPAN11-204ENST00000546076 CFTRP13569 1480 aa28.89■■■□□ 2.22
TSPAN11-204ENST00000546076 OSCARQ8IYS5 282 aa28.83■■■□□ 2.21
TSPAN11-204ENST00000546076 RSF1Q96T23 1441 aaPredicted RBP28.83■■■□□ 2.21
TSPAN11-204ENST00000546076 URB2Q14146 1524 aaKnown RBP28.76■■■□□ 2.19
TSPAN11-204ENST00000546076 TOP2AP11388 1531 aaKnown RBP28.74■■■□□ 2.19
TSPAN11-204ENST00000546076 ZNF608Q9ULD9 1512 aaPredicted RBP28.48■■■□□ 2.15
TSPAN11-204ENST00000546076 CCDC88BA6NC98 1476 aa28.47■■■□□ 2.15
TSPAN11-204ENST00000546076 IFT140Q96RY7 1462 aa28.46■■■□□ 2.15
TSPAN11-204ENST00000546076 PRDM2Q13029 1718 aa28.41■■■□□ 2.14
TSPAN11-204ENST00000546076 RIMBP3CA6NJZ7 1639 aa28.4■■■□□ 2.14
TSPAN11-204ENST00000546076 RIMBP3BA6NNM3 1639 aa28.4■■■□□ 2.14
TSPAN11-204ENST00000546076 RIMBP3Q9UFD9 1639 aa28.4■■■□□ 2.14
TSPAN11-204ENST00000546076 TOPBP1Q92547 1522 aa28.38■■■□□ 2.13
TSPAN11-204ENST00000546076 ARHGEF11O15085 1522 aa28.3■■■□□ 2.12
TSPAN11-204ENST00000546076 ABCC8Q09428 1581 aa28.26■■■□□ 2.11
TSPAN11-204ENST00000546076 EIF4G3O43432 1585 aaKnown RBP28.23■■■□□ 2.11
TSPAN11-204ENST00000546076 CYB5RLQ6IPT4 315 aa28.21■■■□□ 2.11
TSPAN11-204ENST00000546076 DNMBPQ6XZF7 1577 aa28.2■■■□□ 2.11
TSPAN11-204ENST00000546076 AQRO60306 1485 aaKnown RBP eCLIP28.2■■■□□ 2.1
TSPAN11-204ENST00000546076 FBLN2P98095 1184 aa28.13■■■□□ 2.09
TSPAN11-204ENST00000546076 TARBP1Q13395 1621 aaKnown RBP28.11■■■□□ 2.09
TSPAN11-204ENST00000546076 POLA1P09884 1462 aaPredicted RBP28.07■■■□□ 2.08
TSPAN11-204ENST00000546076 CHD1O14646 1710 aa28.06■■■□□ 2.08
TSPAN11-204ENST00000546076 ARAP1Q96P48 1450 aa28.02■■■□□ 2.08
TSPAN11-204ENST00000546076 RAD54L2Q9Y4B4 1467 aa28.02■■■□□ 2.08
TSPAN11-204ENST00000546076 TRHP20396 242 aaPredicted RBP28.01■■■□□ 2.07
TSPAN11-204ENST00000546076 TDRD9Q8NDG6 1382 aaKnown RBP27.99■■■□□ 2.07
TSPAN11-204ENST00000546076 SOGA1O94964 1423 aa27.97■■■□□ 2.07
TSPAN11-204ENST00000546076 SNAPC4Q5SXM2 1469 aa27.86■■■□□ 2.05
TSPAN11-204ENST00000546076 FGD5Q6ZNL6 1462 aa27.84■■■□□ 2.05
TSPAN11-204ENST00000546076 CHMP7Q8WUX9 453 aaPredicted RBP27.84■■■□□ 2.05
TSPAN11-204ENST00000546076 CUX1P39880 1505 aa27.77■■■□□ 2.04
TSPAN11-204ENST00000546076 CLASP1Q7Z460 1538 aa27.77■■■□□ 2.04
TSPAN11-204ENST00000546076 WDR97A6NE52 1622 aa27.74■■■□□ 2.03
TSPAN11-204ENST00000546076 MAGI1Q96QZ7 1491 aaPredicted RBP27.74■■■□□ 2.03
TSPAN11-204ENST00000546076 GRIN2BQ13224 1484 aa27.73■■■□□ 2.03
TSPAN11-204ENST00000546076 SYNJ1O43426 1573 aa27.71■■■□□ 2.03
TSPAN11-204ENST00000546076 SYNJ2O15056 1496 aa27.67■■■□□ 2.02
TSPAN11-204ENST00000546076 GAPVD1Q14C86 1478 aa27.6■■■□□ 2.01
TSPAN11-204ENST00000546076 PBRM1Q86U86 1689 aa27.51■■□□□ 1.99
TSPAN11-204ENST00000546076 ABCA10Q8WWZ4 1543 aa27.5■■□□□ 1.99
TSPAN11-204ENST00000546076 ABCA5Q8WWZ7 1642 aa27.44■■□□□ 1.98
TSPAN11-204ENST00000546076 AEBP2Q6ZN18 517 aaPredicted RBP27.43■■□□□ 1.98
TSPAN11-204ENST00000546076 SUPT5HO00267 1087 aaKnown RBP27.38■■□□□ 1.97
TSPAN11-204ENST00000546076 GRIN2AQ12879 1464 aa27.37■■□□□ 1.97
TSPAN11-204ENST00000546076 ERCC6L2Q5T890 1561 aa27.36■■□□□ 1.97
TSPAN11-204ENST00000546076 WRNQ14191 1432 aaPredicted RBP eCLIP27.34■■□□□ 1.97
TSPAN11-204ENST00000546076 NUP160Q12769 1436 aa27.3■■□□□ 1.96
TSPAN11-204ENST00000546076 CEP170Q5SW79 1584 aa27.27■■□□□ 1.96
TSPAN11-204ENST00000546076 ADAMTS12P58397 1594 aa27.26■■□□□ 1.96
TSPAN11-204ENST00000546076 FHAD1B1AJZ9 1412 aa27.24■■□□□ 1.95
TSPAN11-204ENST00000546076 TOP2BQ02880 1626 aa27.18■■□□□ 1.94
TSPAN11-204ENST00000546076 SHROOM2Q13796 1616 aa27.16■■□□□ 1.94
TSPAN11-204ENST00000546076 BIVM-ERCC5R4GMW8 1640 aa27.16■■□□□ 1.94
TSPAN11-204ENST00000546076 ERICH3Q5RHP9 1530 aa27.12■■□□□ 1.93
TSPAN11-204ENST00000546076 PRG4Q92954 1404 aaPredicted RBP27.1■■□□□ 1.93
TSPAN11-204ENST00000546076 JPH4Q96JJ6 628 aa27.09■■□□□ 1.93
TSPAN11-204ENST00000546076 KIF13AQ9H1H9 1805 aa26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms