RNA–Protein interactions for RNA: ENST00000545960.5

CADM1-219, Transcript of cell adhesion molecule 1, humanhuman

TSL 5

Gene CADM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-219ENST00000545960 NISCHQ9Y2I1 1504 aa39.27■■■■□ 3.88
CADM1-219ENST00000545960 CCDC180Q9P1Z9 1646 aa35.07■■■■□ 3.21
CADM1-219ENST00000545960 ABCC9O60706 1549 aa34.61■■■■□ 3.13
CADM1-219ENST00000545960 RB1CC1Q8TDY2 1594 aa33.15■■■□□ 2.9
CADM1-219ENST00000545960 NACADO15069 1562 aa33.04■■■□□ 2.88
CADM1-219ENST00000545960 DCAF8L2P0C7V8 631 aa32.82■■■□□ 2.84
CADM1-219ENST00000545960 MYO15BQ96JP2 1530 aa32.77■■■□□ 2.84
CADM1-219ENST00000545960 ZCCHC6Q5VYS8 1495 aaKnown RBP32.65■■■□□ 2.82
CADM1-219ENST00000545960 DCAF1Q9Y4B6 1507 aa32.49■■■□□ 2.79
CADM1-219ENST00000545960 UNC13AQ9UPW8 1703 aa32.46■■■□□ 2.79
CADM1-219ENST00000545960 PABPN1Q86U42 306 aaKnown RBP eCLIP32.27■■■□□ 2.76
CADM1-219ENST00000545960 BICRAQ9NZM4 1560 aa32.24■■■□□ 2.75
CADM1-219ENST00000545960 DNAJC5BQ9UF47 199 aa32.14■■■□□ 2.74
CADM1-219ENST00000545960 SCRIBQ14160 1630 aa31.94■■■□□ 2.7
CADM1-219ENST00000545960 SHROOM4Q9ULL8 1493 aa31.81■■■□□ 2.68
CADM1-219ENST00000545960 EIF4G1Q04637 1599 aaKnown RBP31.37■■■□□ 2.61
CADM1-219ENST00000545960 CC2D2AQ9P2K1 1620 aa31.33■■■□□ 2.61
CADM1-219ENST00000545960 CECR2Q9BXF3 1484 aa31.14■■■□□ 2.58
CADM1-219ENST00000545960 SMARCA4P51532 1647 aa30.55■■■□□ 2.48
CADM1-219ENST00000545960 NCAPD3P42695 1498 aa30.5■■■□□ 2.47
CADM1-219ENST00000545960 ATAD2BQ9ULI0 1458 aa30.47■■■□□ 2.47
CADM1-219ENST00000545960 BAZ1AQ9NRL2 1556 aaPredicted RBP30.43■■■□□ 2.46
CADM1-219ENST00000545960 SMARCA2P51531 1590 aa30.39■■■□□ 2.46
CADM1-219ENST00000545960 HMGXB3Q12766 1538 aa30.32■■■□□ 2.44
CADM1-219ENST00000545960 PEG3Q9GZU2 1588 aa30.28■■■□□ 2.44
CADM1-219ENST00000545960 MROH2BQ7Z745 1585 aa30.27■■■□□ 2.44
CADM1-219ENST00000545960 BAZ1BQ9UIG0 1483 aaKnown RBP30.16■■■□□ 2.42
CADM1-219ENST00000545960 WIZO95785 1651 aa29.91■■■□□ 2.38
CADM1-219ENST00000545960 NESP48681 1621 aa29.88■■■□□ 2.37
CADM1-219ENST00000545960 ERCC6Q03468 1493 aa29.81■■■□□ 2.36
CADM1-219ENST00000545960 RSF1Q96T23 1441 aaPredicted RBP29.79■■■□□ 2.36
CADM1-219ENST00000545960 LAMC3Q9Y6N6 1575 aa29.74■■■□□ 2.35
CADM1-219ENST00000545960 CUX2O14529 1486 aa29.68■■■□□ 2.34
CADM1-219ENST00000545960 CADPSQ9ULU8 1353 aa29.57■■■□□ 2.32
CADM1-219ENST00000545960 TOP2AP11388 1531 aaKnown RBP29.56■■■□□ 2.32
CADM1-219ENST00000545960 THOC2Q8NI27 1593 aaKnown RBP29.53■■■□□ 2.32
CADM1-219ENST00000545960 KIF21AQ7Z4S6 1674 aa29.53■■■□□ 2.32
CADM1-219ENST00000545960 PDS5BQ9NTI5 1447 aa29.52■■■□□ 2.32
CADM1-219ENST00000545960 CFTRP13569 1480 aa29.35■■■□□ 2.29
CADM1-219ENST00000545960 MRC2Q9UBG0 1479 aa29.26■■■□□ 2.27
CADM1-219ENST00000545960 FANCD2Q9BXW9 1451 aa29.23■■■□□ 2.27
CADM1-219ENST00000545960 CCDC88BA6NC98 1476 aa29.23■■■□□ 2.27
CADM1-219ENST00000545960 CEP164Q9UPV0 1460 aa29.22■■■□□ 2.27
CADM1-219ENST00000545960 WDR62O43379 1518 aa29.21■■■□□ 2.27
CADM1-219ENST00000545960 DNAJC5Q9H3Z4 198 aa29.18■■■□□ 2.26
CADM1-219ENST00000545960 PRDM2Q13029 1718 aa29.11■■■□□ 2.25
CADM1-219ENST00000545960 URB2Q14146 1524 aaKnown RBP28.99■■■□□ 2.23
CADM1-219ENST00000545960 TOPBP1Q92547 1522 aa28.74■■■□□ 2.19
CADM1-219ENST00000545960 ABCC8Q09428 1581 aa28.68■■■□□ 2.18
CADM1-219ENST00000545960 DNMBPQ6XZF7 1577 aa28.68■■■□□ 2.18
CADM1-219ENST00000545960 SUPT5HO00267 1087 aaKnown RBP28.66■■■□□ 2.18
CADM1-219ENST00000545960 IFT140Q96RY7 1462 aa28.62■■■□□ 2.17
CADM1-219ENST00000545960 ZNF608Q9ULD9 1512 aaPredicted RBP28.56■■■□□ 2.16
CADM1-219ENST00000545960 TARBP1Q13395 1621 aaKnown RBP28.49■■■□□ 2.15
CADM1-219ENST00000545960 POLA1P09884 1462 aaPredicted RBP28.48■■■□□ 2.15
CADM1-219ENST00000545960 EIF4G3O43432 1585 aaKnown RBP28.43■■■□□ 2.14
CADM1-219ENST00000545960 CUX1P39880 1505 aa28.42■■■□□ 2.14
CADM1-219ENST00000545960 FGD5Q6ZNL6 1462 aa28.35■■■□□ 2.13
CADM1-219ENST00000545960 RAD54L2Q9Y4B4 1467 aa28.35■■■□□ 2.13
CADM1-219ENST00000545960 OSCARQ8IYS5 282 aa28.34■■■□□ 2.13
CADM1-219ENST00000545960 AQRO60306 1485 aaKnown RBP eCLIP28.34■■■□□ 2.137e-6■■□□□ 13.1
CADM1-219ENST00000545960 SOGA1O94964 1423 aa28.32■■■□□ 2.12
CADM1-219ENST00000545960 TDRD9Q8NDG6 1382 aaKnown RBP28.21■■■□□ 2.11
CADM1-219ENST00000545960 WDR97A6NE52 1622 aa28.21■■■□□ 2.11
CADM1-219ENST00000545960 CHD1O14646 1710 aa28.14■■■□□ 2.1
CADM1-219ENST00000545960 BIVM-ERCC5R4GMW8 1640 aa28.08■■■□□ 2.09
CADM1-219ENST00000545960 ABCA10Q8WWZ4 1543 aa28.07■■■□□ 2.08
CADM1-219ENST00000545960 TOP2BQ02880 1626 aa28.07■■■□□ 2.08
CADM1-219ENST00000545960 SNAPC4Q5SXM2 1469 aa28.06■■■□□ 2.08
CADM1-219ENST00000545960 SYNJ1O43426 1573 aa28.05■■■□□ 2.08
CADM1-219ENST00000545960 WRNQ14191 1432 aaPredicted RBP eCLIP28.05■■■□□ 2.08
CADM1-219ENST00000545960 GRIN2BQ13224 1484 aa28.04■■■□□ 2.08
CADM1-219ENST00000545960 ABCA5Q8WWZ7 1642 aa28.01■■■□□ 2.07
CADM1-219ENST00000545960 MAGI1Q96QZ7 1491 aaPredicted RBP28.01■■■□□ 2.07
CADM1-219ENST00000545960 TRIM41Q8WV44 630 aa28■■■□□ 2.07
CADM1-219ENST00000545960 GAPVD1Q14C86 1478 aa28■■■□□ 2.07
CADM1-219ENST00000545960 PBRM1Q86U86 1689 aa27.99■■■□□ 2.07
CADM1-219ENST00000545960 RIMBP3CA6NJZ7 1639 aa27.99■■■□□ 2.07
CADM1-219ENST00000545960 RIMBP3BA6NNM3 1639 aa27.99■■■□□ 2.07
CADM1-219ENST00000545960 RIMBP3Q9UFD9 1639 aa27.99■■■□□ 2.07
CADM1-219ENST00000545960 FBLN2P98095 1184 aa27.97■■■□□ 2.07
CADM1-219ENST00000545960 ARHGEF11O15085 1522 aa27.94■■■□□ 2.06
CADM1-219ENST00000545960 SYNJ2O15056 1496 aa27.9■■■□□ 2.06
CADM1-219ENST00000545960 CHMP7Q8WUX9 453 aaPredicted RBP27.86■■■□□ 2.05
CADM1-219ENST00000545960 CLASP1Q7Z460 1538 aa27.85■■■□□ 2.05
CADM1-219ENST00000545960 ADAMTS12P58397 1594 aa27.75■■■□□ 2.03
CADM1-219ENST00000545960 ERICH3Q5RHP9 1530 aa27.72■■■□□ 2.03
CADM1-219ENST00000545960 ARAP1Q96P48 1450 aa27.7■■■□□ 2.03
CADM1-219ENST00000545960 GRIN2AQ12879 1464 aa27.7■■■□□ 2.02
CADM1-219ENST00000545960 FHAD1B1AJZ9 1412 aa27.66■■■□□ 2.02
CADM1-219ENST00000545960 CYB5RLQ6IPT4 315 aa27.64■■■□□ 2.02
CADM1-219ENST00000545960 NUP160Q12769 1436 aa27.61■■■□□ 2.01
CADM1-219ENST00000545960 CEP170Q5SW79 1584 aa27.59■■■□□ 2.01
CADM1-219ENST00000545960 KIF27Q86VH2 1401 aa27.48■■□□□ 1.99
CADM1-219ENST00000545960 IGF1RP08069 1367 aa27.46■■□□□ 1.99
CADM1-219ENST00000545960 SHROOM2Q13796 1616 aa27.45■■□□□ 1.99
CADM1-219ENST00000545960 ERCC6L2Q5T890 1561 aa27.44■■□□□ 1.98
CADM1-219ENST00000545960 CUL7Q14999 1698 aa27.39■■□□□ 1.97
CADM1-219ENST00000545960 RUSC2Q8N2Y8 1516 aa27.36■■□□□ 1.97
CADM1-219ENST00000545960 JPH4Q96JJ6 628 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms