RNA–Protein interactions for RNA: ENST00000545921.5

SOX5-215, Transcript of SRY-box 5, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SOX5, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX5-215ENST00000545921 NISCHQ9Y2I1 1504 aa19.51■□□□□ 0.71
SOX5-215ENST00000545921 SHROOM4Q9ULL8 1493 aa17.16■□□□□ 0.34
SOX5-215ENST00000545921 SUPT5HO00267 1087 aaKnown RBP16.97■□□□□ 0.31
SOX5-215ENST00000545921 HRCP23327 699 aa16.65■□□□□ 0.26
SOX5-215ENST00000545921 MYO15BQ96JP2 1530 aa16.63■□□□□ 0.25
SOX5-215ENST00000545921 ZCCHC6Q5VYS8 1495 aaKnown RBP16.57■□□□□ 0.24
SOX5-215ENST00000545921 CHIC1Q5VXU3 224 aa16.54■□□□□ 0.24
SOX5-215ENST00000545921 PCGF6Q9BYE7 350 aa16.5■□□□□ 0.23
SOX5-215ENST00000545921 PPARGC1BQ86YN6 1023 aaKnown RBP16.38■□□□□ 0.21
SOX5-215ENST00000545921 DCAF8L2P0C7V8 631 aa16.35■□□□□ 0.21
SOX5-215ENST00000545921 CCDC180Q9P1Z9 1646 aa16.35■□□□□ 0.21
SOX5-215ENST00000545921 LOC105371045A0A1W2PR82 267 aa16.17■□□□□ 0.18
SOX5-215ENST00000545921 DCAF1Q9Y4B6 1507 aa16.16■□□□□ 0.18
SOX5-215ENST00000545921 TRIM26Q12899 539 aaPredicted RBP15.99■□□□□ 0.15
SOX5-215ENST00000545921 ZEB1P37275 1124 aaPredicted RBP15.75■□□□□ 0.11
SOX5-215ENST00000545921 ABCC9O60706 1549 aa15.73■□□□□ 0.11
SOX5-215ENST00000545921 FAM9AQ8IZU1 332 aaPredicted RBP15.71■□□□□ 0.11
SOX5-215ENST00000545921 TRIM41Q8WV44 630 aa15.7■□□□□ 0.1
SOX5-215ENST00000545921 EHMT2Q96KQ7 1210 aa15.68■□□□□ 0.1
SOX5-215ENST00000545921 SCAF1Q9H7N4 1312 aaKnown RBP15.63■□□□□ 0.09
SOX5-215ENST00000545921 PELP1Q8IZL8 1130 aaKnown RBP15.62■□□□□ 0.09
SOX5-215ENST00000545921 RSF1Q96T23 1441 aaPredicted RBP15.62■□□□□ 0.09
SOX5-215ENST00000545921 SCRIBQ14160 1630 aa15.58■□□□□ 0.08
SOX5-215ENST00000545921 RB1CC1Q8TDY2 1594 aa15.58■□□□□ 0.08
SOX5-215ENST00000545921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.39■□□□□ 0.05
SOX5-215ENST00000545921 CCER1Q8TC90 406 aaPredicted RBP15.35■□□□□ 0.05
SOX5-215ENST00000545921 ACIN1Q9UKV3 1341 aaKnown RBP15.32■□□□□ 0.04
SOX5-215ENST00000545921 NEUROD1Q13562 356 aa15.31■□□□□ 0.04
SOX5-215ENST00000545921 CECR2Q9BXF3 1484 aa15.29■□□□□ 0.04
SOX5-215ENST00000545921 TTBK1Q5TCY1 1321 aaPredicted RBP15.26■□□□□ 0.03
SOX5-215ENST00000545921 MROH2BQ7Z745 1585 aa15.25■□□□□ 0.03
SOX5-215ENST00000545921 DIEXFQ68CQ4 756 aaKnown RBP15.23■□□□□ 0.03
SOX5-215ENST00000545921 WIZO95785 1651 aa15.22■□□□□ 0.03
SOX5-215ENST00000545921 GTF3C3Q9Y5Q9 886 aa15.21■□□□□ 0.02
SOX5-215ENST00000545921 CENPBP07199 599 aaPredicted RBP15.18■□□□□ 0.02
SOX5-215ENST00000545921 BAZ1AQ9NRL2 1556 aaPredicted RBP15.08■□□□□ 0
SOX5-215ENST00000545921 EIF4G1Q04637 1599 aaKnown RBP15.07■□□□□ 0
SOX5-215ENST00000545921 NACADO15069 1562 aa15.06■□□□□ 0
SOX5-215ENST00000545921 ABCC8Q09428 1581 aa15.05■□□□□ 0
SOX5-215ENST00000545921 CEP162Q5TB80 1403 aa15.04■□□□□ -0
SOX5-215ENST00000545921 CCDC88BA6NC98 1476 aa15.02□□□□□ -0.01
SOX5-215ENST00000545921 WRNQ14191 1432 aaPredicted RBP eCLIP15.01□□□□□ -0.01
SOX5-215ENST00000545921 YTHDC1Q96MU7 727 aaKnown RBP15.01□□□□□ -0.01
SOX5-215ENST00000545921 ZNF316A6NFI3 1004 aaPredicted RBP14.97□□□□□ -0.01
SOX5-215ENST00000545921 SOGA1O94964 1423 aa14.96□□□□□ -0.02
SOX5-215ENST00000545921 UBTFP17480 764 aaKnown RBP14.94□□□□□ -0.02
SOX5-215ENST00000545921 TNIKQ9UKE5 1360 aa14.92□□□□□ -0.02
SOX5-215ENST00000545921 TOP2AP11388 1531 aaKnown RBP14.9□□□□□ -0.02
SOX5-215ENST00000545921 MYT1Q01538 1121 aa14.9□□□□□ -0.02
SOX5-215ENST00000545921 RUSC2Q8N2Y8 1516 aa14.88□□□□□ -0.03
SOX5-215ENST00000545921 CSRNP3Q8WYN3 585 aa14.86□□□□□ -0.03
SOX5-215ENST00000545921 HNRNPUL2Q1KMD3 747 aaKnown RBP14.86□□□□□ -0.03
SOX5-215ENST00000545921 MIER1Q8N108 512 aa14.86□□□□□ -0.03
SOX5-215ENST00000545921 SMARCA2P51531 1590 aa14.85□□□□□ -0.03
SOX5-215ENST00000545921 SMARCA4P51532 1647 aa14.81□□□□□ -0.04
SOX5-215ENST00000545921 EEA1Q15075 1411 aa14.8□□□□□ -0.04
SOX5-215ENST00000545921 GOLGA3Q08378 1498 aa14.8□□□□□ -0.04
SOX5-215ENST00000545921 RANGAP1P46060 587 aaPredicted RBP14.69□□□□□ -0.06
SOX5-215ENST00000545921 CLIP1P30622 1438 aa14.68□□□□□ -0.06
SOX5-215ENST00000545921 CEP164Q9UPV0 1460 aa14.66□□□□□ -0.06
SOX5-215ENST00000545921 APLP2Q06481 763 aa14.66□□□□□ -0.06
SOX5-215ENST00000545921 VPS8Q8N3P4 1428 aa14.63□□□□□ -0.07
SOX5-215ENST00000545921 UNC13AQ9UPW8 1703 aa14.62□□□□□ -0.07
SOX5-215ENST00000545921 KIF21BO75037 1637 aa14.62□□□□□ -0.07
SOX5-215ENST00000545921 SYNJ1O43426 1573 aa14.61□□□□□ -0.07
SOX5-215ENST00000545921 RAPGEF2Q9Y4G8 1499 aa14.56□□□□□ -0.08
SOX5-215ENST00000545921 PABPN1Q86U42 306 aaKnown RBP eCLIP14.53□□□□□ -0.08
SOX5-215ENST00000545921 SUPT16HQ9Y5B9 1047 aaKnown RBP14.52□□□□□ -0.08
SOX5-215ENST00000545921 BAZ1BQ9UIG0 1483 aaKnown RBP14.51□□□□□ -0.09
SOX5-215ENST00000545921 DHX57Q6P158 1386 aaKnown RBP14.5□□□□□ -0.09
SOX5-215ENST00000545921 CLSPNQ9HAW4 1339 aa14.45□□□□□ -0.1
SOX5-215ENST00000545921 KANK4Q5T7N3 995 aaPredicted RBP14.42□□□□□ -0.1
SOX5-215ENST00000545921 PEG3Q9GZU2 1588 aa14.41□□□□□ -0.1
SOX5-215ENST00000545921 BICRAQ9NZM4 1560 aa14.38□□□□□ -0.11
SOX5-215ENST00000545921 TSHZ2Q9NRE2 1034 aa14.38□□□□□ -0.11
SOX5-215ENST00000545921 ARAP1Q96P48 1450 aa14.38□□□□□ -0.11
SOX5-215ENST00000545921 ITGAEP38570 1179 aa14.37□□□□□ -0.11
SOX5-215ENST00000545921 KCNH8Q96L42 1107 aa14.34□□□□□ -0.11
SOX5-215ENST00000545921 ATAD2BQ9ULI0 1458 aa14.34□□□□□ -0.11
SOX5-215ENST00000545921 TOP2BQ02880 1626 aa14.34□□□□□ -0.11
SOX5-215ENST00000545921 BCANQ96GW7 911 aa14.32□□□□□ -0.12
SOX5-215ENST00000545921 RRBP1Q9P2E9 1410 aaKnown RBP14.31□□□□□ -0.12
SOX5-215ENST00000545921 ERICH3Q5RHP9 1530 aa14.3□□□□□ -0.12
SOX5-215ENST00000545921 PRXQ9BXM0 1461 aa14.29□□□□□ -0.12
SOX5-215ENST00000545921 CCNB3Q8WWL7 1395 aa14.28□□□□□ -0.12
SOX5-215ENST00000545921 ANP32EQ9BTT0 268 aa14.28□□□□□ -0.12
SOX5-215ENST00000545921 BIVM-ERCC5R4GMW8 1640 aa14.26□□□□□ -0.13
SOX5-215ENST00000545921 CUX2O14529 1486 aa14.24□□□□□ -0.13
SOX5-215ENST00000545921 RAB3GAP2Q9H2M9 1393 aa14.23□□□□□ -0.13
SOX5-215ENST00000545921 FKBP8Q14318 412 aa14.23□□□□□ -0.13
SOX5-215ENST00000545921 DDX10Q13206 875 aaKnown RBP14.21□□□□□ -0.13
SOX5-215ENST00000545921 MAPKBP1O60336 1514 aa14.2□□□□□ -0.14
SOX5-215ENST00000545921 ARHGAP35Q9NRY4 1499 aa14.19□□□□□ -0.14
SOX5-215ENST00000545921 KIF27Q86VH2 1401 aa14.18□□□□□ -0.14
SOX5-215ENST00000545921 CUX1P39880 1505 aa14.16□□□□□ -0.14
SOX5-215ENST00000545921 SIN3AQ96ST3 1273 aa14.16□□□□□ -0.14
SOX5-215ENST00000545921 WDR97A6NE52 1622 aa14.15□□□□□ -0.14
SOX5-215ENST00000545921 HIRIP3Q9BW71 556 aaPredicted RBP14.15□□□□□ -0.14
SOX5-215ENST00000545921 NEFLP07196 543 aa14.13□□□□□ -0.15
SOX5-215ENST00000545921 FAM50AQ14320 339 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms