RNA–Protein interactions for RNA: ENST00000545615.1

RFLNA-204, Transcript of refilin A, humanhuman

TSL 3

Gene RFLNA, Length 449 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFLNA-204ENST00000545615 NISCHQ9Y2I1 1504 aa28.89■■■□□ 2.21
RFLNA-204ENST00000545615 CCDC180Q9P1Z9 1646 aa25.52■■□□□ 1.68
RFLNA-204ENST00000545615 ABCC9O60706 1549 aa24.7■■□□□ 1.54
RFLNA-204ENST00000545615 ZCCHC6Q5VYS8 1495 aaKnown RBP24.13■■□□□ 1.45
RFLNA-204ENST00000545615 DCAF8L2P0C7V8 631 aa24.01■■□□□ 1.43
RFLNA-204ENST00000545615 NACADO15069 1562 aa23.91■■□□□ 1.42
RFLNA-204ENST00000545615 DCAF1Q9Y4B6 1507 aa23.88■■□□□ 1.41
RFLNA-204ENST00000545615 RB1CC1Q8TDY2 1594 aa23.85■■□□□ 1.41
RFLNA-204ENST00000545615 MYO15BQ96JP2 1530 aa23.84■■□□□ 1.41
RFLNA-204ENST00000545615 UNC13AQ9UPW8 1703 aa23.42■■□□□ 1.34
RFLNA-204ENST00000545615 SCRIBQ14160 1630 aa23.36■■□□□ 1.33
RFLNA-204ENST00000545615 BICRAQ9NZM4 1560 aa23.18■■□□□ 1.3
RFLNA-204ENST00000545615 PABPN1Q86U42 306 aaKnown RBP eCLIP23.15■■□□□ 1.3
RFLNA-204ENST00000545615 SHROOM4Q9ULL8 1493 aa23.05■■□□□ 1.28
RFLNA-204ENST00000545615 EIF4G1Q04637 1599 aaKnown RBP22.51■■□□□ 1.19
RFLNA-204ENST00000545615 CECR2Q9BXF3 1484 aa22.51■■□□□ 1.19
RFLNA-204ENST00000545615 DNAJC5BQ9UF47 199 aa22.43■■□□□ 1.18
RFLNA-204ENST00000545615 CC2D2AQ9P2K1 1620 aa22.36■■□□□ 1.17
RFLNA-204ENST00000545615 SMARCA4P51532 1647 aa22.35■■□□□ 1.17
RFLNA-204ENST00000545615 BAZ1AQ9NRL2 1556 aaPredicted RBP22.34■■□□□ 1.17
RFLNA-204ENST00000545615 MROH2BQ7Z745 1585 aa22.3■■□□□ 1.16
RFLNA-204ENST00000545615 ATAD2BQ9ULI0 1458 aa22.15■■□□□ 1.14
RFLNA-204ENST00000545615 RSF1Q96T23 1441 aaPredicted RBP22.14■■□□□ 1.14
RFLNA-204ENST00000545615 PEG3Q9GZU2 1588 aa22.11■■□□□ 1.13
RFLNA-204ENST00000545615 WIZO95785 1651 aa22.1■■□□□ 1.13
RFLNA-204ENST00000545615 SMARCA2P51531 1590 aa22.09■■□□□ 1.13
RFLNA-204ENST00000545615 NCAPD3P42695 1498 aa22.07■■□□□ 1.12
RFLNA-204ENST00000545615 HMGXB3Q12766 1538 aa21.97■■□□□ 1.11
RFLNA-204ENST00000545615 BAZ1BQ9UIG0 1483 aaKnown RBP21.96■■□□□ 1.11
RFLNA-204ENST00000545615 SUPT5HO00267 1087 aaKnown RBP21.83■■□□□ 1.09
RFLNA-204ENST00000545615 TOP2AP11388 1531 aaKnown RBP21.82■■□□□ 1.08
RFLNA-204ENST00000545615 CCDC88BA6NC98 1476 aa21.59■■□□□ 1.05
RFLNA-204ENST00000545615 NESP48681 1621 aa21.49■■□□□ 1.03
RFLNA-204ENST00000545615 CADPSQ9ULU8 1353 aa21.44■■□□□ 1.02
RFLNA-204ENST00000545615 LAMC3Q9Y6N6 1575 aa21.42■■□□□ 1.02
RFLNA-204ENST00000545615 CFTRP13569 1480 aa21.39■■□□□ 1.01
RFLNA-204ENST00000545615 PRDM2Q13029 1718 aa21.28■■□□□ 1
RFLNA-204ENST00000545615 KIF21AQ7Z4S6 1674 aa21.25■□□□□ 0.99
RFLNA-204ENST00000545615 PDS5BQ9NTI5 1447 aa21.24■□□□□ 0.99
RFLNA-204ENST00000545615 ERCC6Q03468 1493 aa21.21■□□□□ 0.99
RFLNA-204ENST00000545615 FANCD2Q9BXW9 1451 aa21.2■□□□□ 0.98
RFLNA-204ENST00000545615 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
RFLNA-204ENST00000545615 THOC2Q8NI27 1593 aaKnown RBP21.08■□□□□ 0.97
RFLNA-204ENST00000545615 MRC2Q9UBG0 1479 aa21.03■□□□□ 0.96
RFLNA-204ENST00000545615 URB2Q14146 1524 aaKnown RBP20.99■□□□□ 0.95
RFLNA-204ENST00000545615 WDR62O43379 1518 aa20.97■□□□□ 0.95
RFLNA-204ENST00000545615 ABCC8Q09428 1581 aa20.93■□□□□ 0.94
RFLNA-204ENST00000545615 TOPBP1Q92547 1522 aa20.91■□□□□ 0.94
RFLNA-204ENST00000545615 DNMBPQ6XZF7 1577 aa20.9■□□□□ 0.94
RFLNA-204ENST00000545615 CUX1P39880 1505 aa20.89■□□□□ 0.94
RFLNA-204ENST00000545615 CUX2O14529 1486 aa20.86■□□□□ 0.93
RFLNA-204ENST00000545615 WRNQ14191 1432 aaPredicted RBP eCLIP20.84■□□□□ 0.93
RFLNA-204ENST00000545615 SYNJ1O43426 1573 aa20.82■□□□□ 0.92
RFLNA-204ENST00000545615 BIVM-ERCC5R4GMW8 1640 aa20.78■□□□□ 0.92
RFLNA-204ENST00000545615 TOP2BQ02880 1626 aa20.78■□□□□ 0.92
RFLNA-204ENST00000545615 POLA1P09884 1462 aaPredicted RBP20.75■□□□□ 0.91
RFLNA-204ENST00000545615 FGD5Q6ZNL6 1462 aa20.75■□□□□ 0.91
RFLNA-204ENST00000545615 RAD54L2Q9Y4B4 1467 aa20.69■□□□□ 0.9
RFLNA-204ENST00000545615 TARBP1Q13395 1621 aaKnown RBP20.67■□□□□ 0.9
RFLNA-204ENST00000545615 SOGA1O94964 1423 aa20.66■□□□□ 0.9
RFLNA-204ENST00000545615 IFT140Q96RY7 1462 aa20.66■□□□□ 0.9
RFLNA-204ENST00000545615 ZNF608Q9ULD9 1512 aaPredicted RBP20.6■□□□□ 0.89
RFLNA-204ENST00000545615 WDR97A6NE52 1622 aa20.6■□□□□ 0.89
RFLNA-204ENST00000545615 CHIC1Q5VXU3 224 aa20.57■□□□□ 0.88
RFLNA-204ENST00000545615 TRIM41Q8WV44 630 aa20.57■□□□□ 0.88
RFLNA-204ENST00000545615 ABCA10Q8WWZ4 1543 aa20.55■□□□□ 0.88
RFLNA-204ENST00000545615 AQRO60306 1485 aaKnown RBP eCLIP20.52■□□□□ 0.888e-7■■■■■ 30.7
RFLNA-204ENST00000545615 TDRD9Q8NDG6 1382 aaKnown RBP20.52■□□□□ 0.88
RFLNA-204ENST00000545615 EIF4G3O43432 1585 aaKnown RBP20.51■□□□□ 0.87
RFLNA-204ENST00000545615 ABCA5Q8WWZ7 1642 aa20.46■□□□□ 0.87
RFLNA-204ENST00000545615 GAPVD1Q14C86 1478 aa20.43■□□□□ 0.86
RFLNA-204ENST00000545615 PBRM1Q86U86 1689 aa20.4■□□□□ 0.86
RFLNA-204ENST00000545615 RUSC2Q8N2Y8 1516 aa20.37■□□□□ 0.85
RFLNA-204ENST00000545615 GRIN2BQ13224 1484 aa20.37■□□□□ 0.85
RFLNA-204ENST00000545615 KIF27Q86VH2 1401 aa20.36■□□□□ 0.85
RFLNA-204ENST00000545615 SNAPC4Q5SXM2 1469 aa20.32■□□□□ 0.84
RFLNA-204ENST00000545615 ERICH3Q5RHP9 1530 aa20.3■□□□□ 0.84
RFLNA-204ENST00000545615 IGF1RP08069 1367 aa20.28■□□□□ 0.84
RFLNA-204ENST00000545615 MAGI1Q96QZ7 1491 aaPredicted RBP20.27■□□□□ 0.84
RFLNA-204ENST00000545615 ADAMTS12P58397 1594 aa20.24■□□□□ 0.83
RFLNA-204ENST00000545615 CHD1O14646 1710 aa20.23■□□□□ 0.83
RFLNA-204ENST00000545615 SYNJ2O15056 1496 aa20.19■□□□□ 0.82
RFLNA-204ENST00000545615 FAM9AQ8IZU1 332 aaPredicted RBP20.19■□□□□ 0.82
RFLNA-204ENST00000545615 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
RFLNA-204ENST00000545615 FBLN2P98095 1184 aa20.18■□□□□ 0.82
RFLNA-204ENST00000545615 CUL7Q14999 1698 aa20.18■□□□□ 0.82
RFLNA-204ENST00000545615 CHMP7Q8WUX9 453 aaPredicted RBP20.16■□□□□ 0.82
RFLNA-204ENST00000545615 EEA1Q15075 1411 aa20.16■□□□□ 0.82
RFLNA-204ENST00000545615 CARMIL1Q5VZK9 1371 aa20.15■□□□□ 0.82
RFLNA-204ENST00000545615 CSRNP3Q8WYN3 585 aa20.14■□□□□ 0.81
RFLNA-204ENST00000545615 GRIN2AQ12879 1464 aa20.12■□□□□ 0.81
RFLNA-204ENST00000545615 PRXQ9BXM0 1461 aa20.09■□□□□ 0.81
RFLNA-204ENST00000545615 OSCARQ8IYS5 282 aa20.07■□□□□ 0.8
RFLNA-204ENST00000545615 RAPGEF2Q9Y4G8 1499 aa20.05■□□□□ 0.8
RFLNA-204ENST00000545615 CEP170Q5SW79 1584 aa20.04■□□□□ 0.8
RFLNA-204ENST00000545615 NUP160Q12769 1436 aa20.02■□□□□ 0.8
RFLNA-204ENST00000545615 KIF21BO75037 1637 aa19.98■□□□□ 0.79
RFLNA-204ENST00000545615 CLASP1Q7Z460 1538 aa19.98■□□□□ 0.79
RFLNA-204ENST00000545615 EHMT2Q96KQ7 1210 aa19.92■□□□□ 0.78
RFLNA-204ENST00000545615 KIAA0586Q9BVV6 1533 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms