RNA–Protein interactions for RNA: ENST00000545337.1

C1RL-212, Transcript of complement C1r subcomponent like, humanhuman

TSL 1 (best) BASIC

Gene C1RL, Length 813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-212ENST00000545337 NISCHQ9Y2I1 1504 aa36.54■■■■□ 3.44
C1RL-212ENST00000545337 CCDC180Q9P1Z9 1646 aa32.58■■■□□ 2.81
C1RL-212ENST00000545337 ABCC9O60706 1549 aa32.07■■■□□ 2.72
C1RL-212ENST00000545337 RB1CC1Q8TDY2 1594 aa30.83■■■□□ 2.53
C1RL-212ENST00000545337 DCAF8L2P0C7V8 631 aa30.78■■■□□ 2.52
C1RL-212ENST00000545337 NACADO15069 1562 aa30.74■■■□□ 2.51
C1RL-212ENST00000545337 MYO15BQ96JP2 1530 aa30.48■■■□□ 2.47
C1RL-212ENST00000545337 DNAJC5BQ9UF47 199 aa30.36■■■□□ 2.45
C1RL-212ENST00000545337 ZCCHC6Q5VYS8 1495 aaKnown RBP30.36■■■□□ 2.45
C1RL-212ENST00000545337 DCAF1Q9Y4B6 1507 aa30.26■■■□□ 2.43
C1RL-212ENST00000545337 PABPN1Q86U42 306 aaKnown RBP eCLIP29.98■■■□□ 2.39
C1RL-212ENST00000545337 UNC13AQ9UPW8 1703 aa29.97■■■□□ 2.39
C1RL-212ENST00000545337 BICRAQ9NZM4 1560 aa29.76■■■□□ 2.35
C1RL-212ENST00000545337 SCRIBQ14160 1630 aa29.67■■■□□ 2.34
C1RL-212ENST00000545337 SHROOM4Q9ULL8 1493 aa29.59■■■□□ 2.33
C1RL-212ENST00000545337 EIF4G1Q04637 1599 aaKnown RBP29.05■■■□□ 2.24
C1RL-212ENST00000545337 CC2D2AQ9P2K1 1620 aa28.99■■■□□ 2.23
C1RL-212ENST00000545337 CECR2Q9BXF3 1484 aa28.88■■■□□ 2.21
C1RL-212ENST00000545337 BAZ1AQ9NRL2 1556 aaPredicted RBP28.38■■■□□ 2.13
C1RL-212ENST00000545337 SMARCA4P51532 1647 aa28.37■■■□□ 2.13
C1RL-212ENST00000545337 DNAJC5Q9H3Z4 198 aa28.36■■■□□ 2.13
C1RL-212ENST00000545337 NCAPD3P42695 1498 aa28.35■■■□□ 2.13
C1RL-212ENST00000545337 SMARCA2P51531 1590 aa28.32■■■□□ 2.12
C1RL-212ENST00000545337 ATAD2BQ9ULI0 1458 aa28.31■■■□□ 2.12
C1RL-212ENST00000545337 HMGXB3Q12766 1538 aa28.17■■■□□ 2.1
C1RL-212ENST00000545337 MROH2BQ7Z745 1585 aa28.11■■■□□ 2.09
C1RL-212ENST00000545337 PEG3Q9GZU2 1588 aa28.11■■■□□ 2.09
C1RL-212ENST00000545337 BAZ1BQ9UIG0 1483 aaKnown RBP28.1■■■□□ 2.09
C1RL-212ENST00000545337 WIZO95785 1651 aa27.79■■■□□ 2.04
C1RL-212ENST00000545337 RSF1Q96T23 1441 aaPredicted RBP27.76■■■□□ 2.04
C1RL-212ENST00000545337 ERCC6Q03468 1493 aa27.76■■■□□ 2.03
C1RL-212ENST00000545337 CUX2O14529 1486 aa27.64■■■□□ 2.02
C1RL-212ENST00000545337 NESP48681 1621 aa27.64■■■□□ 2.02
C1RL-212ENST00000545337 LAMC3Q9Y6N6 1575 aa27.64■■■□□ 2.01
C1RL-212ENST00000545337 CADPSQ9ULU8 1353 aa27.55■■■□□ 2
C1RL-212ENST00000545337 PDS5BQ9NTI5 1447 aa27.54■■■□□ 2
C1RL-212ENST00000545337 TOP2AP11388 1531 aaKnown RBP27.53■■■□□ 2
C1RL-212ENST00000545337 KIF21AQ7Z4S6 1674 aa27.3■■□□□ 1.96
C1RL-212ENST00000545337 CFTRP13569 1480 aa27.3■■□□□ 1.96
C1RL-212ENST00000545337 THOC2Q8NI27 1593 aaKnown RBP27.25■■□□□ 1.95
C1RL-212ENST00000545337 CCDC88BA6NC98 1476 aa27.22■■□□□ 1.95
C1RL-212ENST00000545337 FANCD2Q9BXW9 1451 aa27.19■■□□□ 1.94
C1RL-212ENST00000545337 CEP164Q9UPV0 1460 aa27.19■■□□□ 1.94
C1RL-212ENST00000545337 MRC2Q9UBG0 1479 aa27.19■■□□□ 1.94
C1RL-212ENST00000545337 WDR62O43379 1518 aa27.06■■□□□ 1.92
C1RL-212ENST00000545337 PRDM2Q13029 1718 aa27.02■■□□□ 1.92
C1RL-212ENST00000545337 SUPT5HO00267 1087 aaKnown RBP27■■□□□ 1.91
C1RL-212ENST00000545337 URB2Q14146 1524 aaKnown RBP26.87■■□□□ 1.89
C1RL-212ENST00000545337 TRIM41Q8WV44 630 aa26.87■■□□□ 1.89
C1RL-212ENST00000545337 ABCC8Q09428 1581 aa26.83■■□□□ 1.89
C1RL-212ENST00000545337 TOPBP1Q92547 1522 aa26.71■■□□□ 1.87
C1RL-212ENST00000545337 DNMBPQ6XZF7 1577 aa26.67■■□□□ 1.86
C1RL-212ENST00000545337 IFT140Q96RY7 1462 aa26.65■■□□□ 1.86
C1RL-212ENST00000545337 POLA1P09884 1462 aaPredicted RBP26.46■■□□□ 1.83
C1RL-212ENST00000545337 ZNF608Q9ULD9 1512 aaPredicted RBP26.44■■□□□ 1.82
C1RL-212ENST00000545337 OSCARQ8IYS5 282 aa26.44■■□□□ 1.82
C1RL-212ENST00000545337 SOGA1O94964 1423 aa26.43■■□□□ 1.82
C1RL-212ENST00000545337 CUX1P39880 1505 aa26.39■■□□□ 1.82
C1RL-212ENST00000545337 TARBP1Q13395 1621 aaKnown RBP26.39■■□□□ 1.82
C1RL-212ENST00000545337 FGD5Q6ZNL6 1462 aa26.37■■□□□ 1.81
C1RL-212ENST00000545337 RAD54L2Q9Y4B4 1467 aa26.34■■□□□ 1.81
C1RL-212ENST00000545337 EIF4G3O43432 1585 aaKnown RBP26.33■■□□□ 1.81
C1RL-212ENST00000545337 AQRO60306 1485 aaKnown RBP eCLIP26.33■■□□□ 1.81
C1RL-212ENST00000545337 WDR97A6NE52 1622 aa26.28■■□□□ 1.8
C1RL-212ENST00000545337 TDRD9Q8NDG6 1382 aaKnown RBP26.27■■□□□ 1.8
C1RL-212ENST00000545337 WRNQ14191 1432 aaPredicted RBP eCLIP26.23■■□□□ 1.79
C1RL-212ENST00000545337 FBLN2P98095 1184 aa26.18■■□□□ 1.78
C1RL-212ENST00000545337 TOP2BQ02880 1626 aa26.15■■□□□ 1.78
C1RL-212ENST00000545337 GRIN2BQ13224 1484 aa26.13■■□□□ 1.77
C1RL-212ENST00000545337 ABCA10Q8WWZ4 1543 aa26.13■■□□□ 1.77
C1RL-212ENST00000545337 BIVM-ERCC5R4GMW8 1640 aa26.12■■□□□ 1.77
C1RL-212ENST00000545337 RIMBP3CA6NJZ7 1639 aa26.11■■□□□ 1.77
C1RL-212ENST00000545337 RIMBP3BA6NNM3 1639 aa26.11■■□□□ 1.77
C1RL-212ENST00000545337 RIMBP3Q9UFD9 1639 aa26.11■■□□□ 1.77
C1RL-212ENST00000545337 GAPVD1Q14C86 1478 aa26.1■■□□□ 1.77
C1RL-212ENST00000545337 CHMP7Q8WUX9 453 aaPredicted RBP26.09■■□□□ 1.77
C1RL-212ENST00000545337 MAGI1Q96QZ7 1491 aaPredicted RBP26.08■■□□□ 1.77
C1RL-212ENST00000545337 SYNJ1O43426 1573 aa26.07■■□□□ 1.76
C1RL-212ENST00000545337 SNAPC4Q5SXM2 1469 aa26.06■■□□□ 1.76
C1RL-212ENST00000545337 CHD1O14646 1710 aa26.03■■□□□ 1.76
C1RL-212ENST00000545337 ABCA5Q8WWZ7 1642 aa25.98■■□□□ 1.75
C1RL-212ENST00000545337 SYNJ2O15056 1496 aa25.98■■□□□ 1.75
C1RL-212ENST00000545337 PBRM1Q86U86 1689 aa25.97■■□□□ 1.75
C1RL-212ENST00000545337 ARHGEF11O15085 1522 aa25.9■■□□□ 1.74
C1RL-212ENST00000545337 ERICH3Q5RHP9 1530 aa25.83■■□□□ 1.73
C1RL-212ENST00000545337 FHAD1B1AJZ9 1412 aa25.8■■□□□ 1.72
C1RL-212ENST00000545337 CLASP1Q7Z460 1538 aa25.76■■□□□ 1.71
C1RL-212ENST00000545337 ADAMTS12P58397 1594 aa25.75■■□□□ 1.71
C1RL-212ENST00000545337 GRIN2AQ12879 1464 aa25.75■■□□□ 1.71
C1RL-212ENST00000545337 KIF27Q86VH2 1401 aa25.75■■□□□ 1.71
C1RL-212ENST00000545337 CYB5RLQ6IPT4 315 aa25.73■■□□□ 1.71
C1RL-212ENST00000545337 NUP160Q12769 1436 aa25.63■■□□□ 1.69
C1RL-212ENST00000545337 IGF1RP08069 1367 aa25.63■■□□□ 1.69
C1RL-212ENST00000545337 ARAP1Q96P48 1450 aa25.6■■□□□ 1.69
C1RL-212ENST00000545337 CEP170Q5SW79 1584 aa25.57■■□□□ 1.68
C1RL-212ENST00000545337 CUL7Q14999 1698 aa25.55■■□□□ 1.68
C1RL-212ENST00000545337 TRHP20396 242 aaPredicted RBP25.53■■□□□ 1.68
C1RL-212ENST00000545337 CARMIL1Q5VZK9 1371 aa25.5■■□□□ 1.67
C1RL-212ENST00000545337 JPH4Q96JJ6 628 aa25.49■■□□□ 1.67
C1RL-212ENST00000545337 SHROOM2Q13796 1616 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms