RNA–Protein interactions for RNA: ENST00000545251.6

KIAA0040-203, Transcript of KIAA0040, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KIAA0040, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA0040-203ENST00000545251 NISCHQ9Y2I1 1504 aa23.01■■□□□ 1.27
KIAA0040-203ENST00000545251 CCDC180Q9P1Z9 1646 aa20.28■□□□□ 0.84
KIAA0040-203ENST00000545251 ABCC9O60706 1549 aa20.11■□□□□ 0.81
KIAA0040-203ENST00000545251 DCAF8L2P0C7V8 631 aa19.48■□□□□ 0.71
KIAA0040-203ENST00000545251 HRCP23327 699 aa19.27■□□□□ 0.67
KIAA0040-203ENST00000545251 PELP1Q8IZL8 1130 aaKnown RBP19.18■□□□□ 0.66
KIAA0040-203ENST00000545251 RB1CC1Q8TDY2 1594 aa19.16■□□□□ 0.66
KIAA0040-203ENST00000545251 ZCCHC6Q5VYS8 1495 aaKnown RBP19.15■□□□□ 0.66
KIAA0040-203ENST00000545251 NACADO15069 1562 aa19.13■□□□□ 0.65
KIAA0040-203ENST00000545251 MYO15BQ96JP2 1530 aa18.96■□□□□ 0.63
KIAA0040-203ENST00000545251 DCAF1Q9Y4B6 1507 aa18.92■□□□□ 0.62
KIAA0040-203ENST00000545251 PABPN1Q86U42 306 aaKnown RBP eCLIP18.9■□□□□ 0.62
KIAA0040-203ENST00000545251 UNC13AQ9UPW8 1703 aa18.75■□□□□ 0.59
KIAA0040-203ENST00000545251 SCRIBQ14160 1630 aa18.71■□□□□ 0.59
KIAA0040-203ENST00000545251 BICRAQ9NZM4 1560 aa18.67■□□□□ 0.58
KIAA0040-203ENST00000545251 PPARGC1BQ86YN6 1023 aaKnown RBP18.62■□□□□ 0.57
KIAA0040-203ENST00000545251 MYT1Q01538 1121 aa18.6■□□□□ 0.57
KIAA0040-203ENST00000545251 DNAJC5BQ9UF47 199 aa18.57■□□□□ 0.56
KIAA0040-203ENST00000545251 PCGF6Q9BYE7 350 aa18.57■□□□□ 0.56
KIAA0040-203ENST00000545251 SHROOM4Q9ULL8 1493 aa18.43■□□□□ 0.54
KIAA0040-203ENST00000545251 SCAF1Q9H7N4 1312 aaKnown RBP18.3■□□□□ 0.52
KIAA0040-203ENST00000545251 SUPT5HO00267 1087 aaKnown RBP18.25■□□□□ 0.51
KIAA0040-203ENST00000545251 CHIC1Q5VXU3 224 aa18.24■□□□□ 0.51
KIAA0040-203ENST00000545251 EIF4G1Q04637 1599 aaKnown RBP18.16■□□□□ 0.5
KIAA0040-203ENST00000545251 ZEB1P37275 1124 aaPredicted RBP18.11■□□□□ 0.49
KIAA0040-203ENST00000545251 CC2D2AQ9P2K1 1620 aa18.1■□□□□ 0.49
KIAA0040-203ENST00000545251 TRIM26Q12899 539 aaPredicted RBP18.06■□□□□ 0.48
KIAA0040-203ENST00000545251 CECR2Q9BXF3 1484 aa18.05■□□□□ 0.48
KIAA0040-203ENST00000545251 ACIN1Q9UKV3 1341 aaKnown RBP17.83■□□□□ 0.44
KIAA0040-203ENST00000545251 SMARCA4P51532 1647 aa17.82■□□□□ 0.44
KIAA0040-203ENST00000545251 MROH2BQ7Z745 1585 aa17.8■□□□□ 0.44
KIAA0040-203ENST00000545251 BAZ1AQ9NRL2 1556 aaPredicted RBP17.78■□□□□ 0.44
KIAA0040-203ENST00000545251 ATAD2BQ9ULI0 1458 aa17.78■□□□□ 0.44
KIAA0040-203ENST00000545251 NCAPD3P42695 1498 aa17.72■□□□□ 0.43
KIAA0040-203ENST00000545251 LOC105371045A0A1W2PR82 267 aa17.71■□□□□ 0.42
KIAA0040-203ENST00000545251 NEUROD1Q13562 356 aa17.69■□□□□ 0.42
KIAA0040-203ENST00000545251 SMARCA2P51531 1590 aa17.66■□□□□ 0.42
KIAA0040-203ENST00000545251 GTF3C3Q9Y5Q9 886 aa17.62■□□□□ 0.41
KIAA0040-203ENST00000545251 BAZ1BQ9UIG0 1483 aaKnown RBP17.61■□□□□ 0.41
KIAA0040-203ENST00000545251 RSF1Q96T23 1441 aaPredicted RBP17.61■□□□□ 0.41
KIAA0040-203ENST00000545251 WIZO95785 1651 aa17.59■□□□□ 0.41
KIAA0040-203ENST00000545251 TTBK1Q5TCY1 1321 aaPredicted RBP17.59■□□□□ 0.41
KIAA0040-203ENST00000545251 CENPBP07199 599 aaPredicted RBP17.59■□□□□ 0.41
KIAA0040-203ENST00000545251 PEG3Q9GZU2 1588 aa17.59■□□□□ 0.41
KIAA0040-203ENST00000545251 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
KIAA0040-203ENST00000545251 NESP48681 1621 aa17.43■□□□□ 0.38
KIAA0040-203ENST00000545251 DIEXFQ68CQ4 756 aaKnown RBP17.32■□□□□ 0.36
KIAA0040-203ENST00000545251 TOP2AP11388 1531 aaKnown RBP17.32■□□□□ 0.36
KIAA0040-203ENST00000545251 ERCC6Q03468 1493 aa17.26■□□□□ 0.35
KIAA0040-203ENST00000545251 CADPSQ9ULU8 1353 aa17.25■□□□□ 0.35
KIAA0040-203ENST00000545251 CCDC88BA6NC98 1476 aa17.22■□□□□ 0.35
KIAA0040-203ENST00000545251 LAMC3Q9Y6N6 1575 aa17.19■□□□□ 0.34
KIAA0040-203ENST00000545251 PDS5BQ9NTI5 1447 aa17.14■□□□□ 0.33
KIAA0040-203ENST00000545251 TRIM41Q8WV44 630 aa17.13■□□□□ 0.33
KIAA0040-203ENST00000545251 CFTRP13569 1480 aa17.13■□□□□ 0.33
KIAA0040-203ENST00000545251 CCER1Q8TC90 406 aaPredicted RBP17.12■□□□□ 0.33
KIAA0040-203ENST00000545251 BCL11AQ9H165 835 aa17.1■□□□□ 0.33
KIAA0040-203ENST00000545251 KIF21AQ7Z4S6 1674 aa17.09■□□□□ 0.33
KIAA0040-203ENST00000545251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.08■□□□□ 0.33
KIAA0040-203ENST00000545251 FANCD2Q9BXW9 1451 aa17.05■□□□□ 0.32
KIAA0040-203ENST00000545251 THOC2Q8NI27 1593 aaKnown RBP17■□□□□ 0.31
KIAA0040-203ENST00000545251 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
KIAA0040-203ENST00000545251 ANP32EQ9BTT0 268 aa16.99■□□□□ 0.31
KIAA0040-203ENST00000545251 CUX2O14529 1486 aa16.97■□□□□ 0.31
KIAA0040-203ENST00000545251 ZNF316A6NFI3 1004 aaPredicted RBP16.96■□□□□ 0.31
KIAA0040-203ENST00000545251 CLSPNQ9HAW4 1339 aa16.95■□□□□ 0.3
KIAA0040-203ENST00000545251 MRC2Q9UBG0 1479 aa16.95■□□□□ 0.3
KIAA0040-203ENST00000545251 FAM9AQ8IZU1 332 aaPredicted RBP16.94■□□□□ 0.3
KIAA0040-203ENST00000545251 URB2Q14146 1524 aaKnown RBP16.9■□□□□ 0.3
KIAA0040-203ENST00000545251 YTHDC1Q96MU7 727 aaKnown RBP16.89■□□□□ 0.29
KIAA0040-203ENST00000545251 WDR62O43379 1518 aa16.87■□□□□ 0.29
KIAA0040-203ENST00000545251 PRDM2Q13029 1718 aa16.82■□□□□ 0.28
KIAA0040-203ENST00000545251 MIER1Q8N108 512 aa16.81■□□□□ 0.28
KIAA0040-203ENST00000545251 TOPBP1Q92547 1522 aa16.77■□□□□ 0.28
KIAA0040-203ENST00000545251 TSHZ2Q9NRE2 1034 aa16.77■□□□□ 0.27
KIAA0040-203ENST00000545251 SUPT16HQ9Y5B9 1047 aaKnown RBP16.75■□□□□ 0.27
KIAA0040-203ENST00000545251 CSRNP3Q8WYN3 585 aa16.73■□□□□ 0.27
KIAA0040-203ENST00000545251 DNMBPQ6XZF7 1577 aa16.69■□□□□ 0.26
KIAA0040-203ENST00000545251 CUX1P39880 1505 aa16.68■□□□□ 0.26
KIAA0040-203ENST00000545251 WRNQ14191 1432 aaPredicted RBP eCLIP16.67■□□□□ 0.26
KIAA0040-203ENST00000545251 ZNF608Q9ULD9 1512 aaPredicted RBP16.67■□□□□ 0.26
KIAA0040-203ENST00000545251 ABCC8Q09428 1581 aa16.66■□□□□ 0.26
KIAA0040-203ENST00000545251 RAD54L2Q9Y4B4 1467 aa16.65■□□□□ 0.26
KIAA0040-203ENST00000545251 POLA1P09884 1462 aaPredicted RBP16.65■□□□□ 0.26
KIAA0040-203ENST00000545251 FGD5Q6ZNL6 1462 aa16.61■□□□□ 0.25
KIAA0040-203ENST00000545251 IFT140Q96RY7 1462 aa16.61■□□□□ 0.25
KIAA0040-203ENST00000545251 PRKCSHP14314 528 aaPredicted RBP16.61■□□□□ 0.25
KIAA0040-203ENST00000545251 SOGA1O94964 1423 aa16.6■□□□□ 0.25
KIAA0040-203ENST00000545251 AQRO60306 1485 aaKnown RBP eCLIP16.6■□□□□ 0.25
KIAA0040-203ENST00000545251 EHMT2Q96KQ7 1210 aa16.59■□□□□ 0.25
KIAA0040-203ENST00000545251 TDRD9Q8NDG6 1382 aaKnown RBP16.59■□□□□ 0.25
KIAA0040-203ENST00000545251 DNAJC5Q9H3Z4 198 aa16.58■□□□□ 0.25
KIAA0040-203ENST00000545251 TARBP1Q13395 1621 aaKnown RBP16.55■□□□□ 0.24
KIAA0040-203ENST00000545251 SYNJ1O43426 1573 aa16.53■□□□□ 0.24
KIAA0040-203ENST00000545251 EIF4G3O43432 1585 aaKnown RBP16.49■□□□□ 0.23
KIAA0040-203ENST00000545251 TOP2BQ02880 1626 aa16.46■□□□□ 0.23
KIAA0040-203ENST00000545251 FBLN2P98095 1184 aa16.45■□□□□ 0.22
KIAA0040-203ENST00000545251 ERICH6Q7L0X2 663 aa16.43■□□□□ 0.22
KIAA0040-203ENST00000545251 BIVM-ERCC5R4GMW8 1640 aa16.42■□□□□ 0.22
KIAA0040-203ENST00000545251 OSCARQ8IYS5 282 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms