RNA–Protein interactions for RNA: ENST00000545054.6

PCK2-203, Transcript of phosphoenolpyruvate carboxykinase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene PCK2, Length 2,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCK2-203ENST00000545054 NISCHQ9Y2I1 1504 aa29.51■■■□□ 2.31
PCK2-203ENST00000545054 HRCP23327 699 aa25.69■■□□□ 1.7
PCK2-203ENST00000545054 SHROOM4Q9ULL8 1493 aa25.67■■□□□ 1.7
PCK2-203ENST00000545054 SUPT5HO00267 1087 aaKnown RBP25.5■■□□□ 1.67
PCK2-203ENST00000545054 MYO15BQ96JP2 1530 aa25.33■■□□□ 1.65
PCK2-203ENST00000545054 CHIC1Q5VXU3 224 aa25.18■■□□□ 1.62
PCK2-203ENST00000545054 PCGF6Q9BYE7 350 aa25.13■■□□□ 1.61
PCK2-203ENST00000545054 ZCCHC6Q5VYS8 1495 aaKnown RBP25.12■■□□□ 1.61
PCK2-203ENST00000545054 PPARGC1BQ86YN6 1023 aaKnown RBP25.02■■□□□ 1.6
PCK2-203ENST00000545054 DCAF1Q9Y4B6 1507 aa24.88■■□□□ 1.57
PCK2-203ENST00000545054 CCDC180Q9P1Z9 1646 aa24.73■■□□□ 1.55
PCK2-203ENST00000545054 PELP1Q8IZL8 1130 aaKnown RBP24.56■■□□□ 1.52
PCK2-203ENST00000545054 TRIM26Q12899 539 aaPredicted RBP24.5■■□□□ 1.51
PCK2-203ENST00000545054 LOC105371045A0A1W2PR82 267 aa24.45■■□□□ 1.51
PCK2-203ENST00000545054 ZEB1P37275 1124 aaPredicted RBP24.28■■□□□ 1.48
PCK2-203ENST00000545054 DCAF8L2P0C7V8 631 aa24.18■■□□□ 1.46
PCK2-203ENST00000545054 SCAF1Q9H7N4 1312 aaKnown RBP24.14■■□□□ 1.45
PCK2-203ENST00000545054 ABCC9O60706 1549 aa23.86■■□□□ 1.41
PCK2-203ENST00000545054 TRIM41Q8WV44 630 aa23.69■■□□□ 1.38
PCK2-203ENST00000545054 ACIN1Q9UKV3 1341 aaKnown RBP23.64■■□□□ 1.38
PCK2-203ENST00000545054 RSF1Q96T23 1441 aaPredicted RBP23.64■■□□□ 1.37
PCK2-203ENST00000545054 MYT1Q01538 1121 aa23.57■■□□□ 1.36
PCK2-203ENST00000545054 NEUROD1Q13562 356 aa23.54■■□□□ 1.36
PCK2-203ENST00000545054 RB1CC1Q8TDY2 1594 aa23.53■■□□□ 1.36
PCK2-203ENST00000545054 FAM9AQ8IZU1 332 aaPredicted RBP23.53■■□□□ 1.36
PCK2-203ENST00000545054 GTF3C3Q9Y5Q9 886 aa23.37■■□□□ 1.33
PCK2-203ENST00000545054 CENPBP07199 599 aaPredicted RBP23.36■■□□□ 1.33
PCK2-203ENST00000545054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.35■■□□□ 1.33
PCK2-203ENST00000545054 CCER1Q8TC90 406 aaPredicted RBP23.33■■□□□ 1.33
PCK2-203ENST00000545054 SCRIBQ14160 1630 aa23.32■■□□□ 1.32
PCK2-203ENST00000545054 DIEXFQ68CQ4 756 aaKnown RBP23.31■■□□□ 1.32
PCK2-203ENST00000545054 EHMT2Q96KQ7 1210 aa23.3■■□□□ 1.32
PCK2-203ENST00000545054 WRNQ14191 1432 aaPredicted RBP eCLIP23.04■■□□□ 1.28
PCK2-203ENST00000545054 MROH2BQ7Z745 1585 aa22.99■■□□□ 1.27
PCK2-203ENST00000545054 CECR2Q9BXF3 1484 aa22.99■■□□□ 1.27
PCK2-203ENST00000545054 EIF4G1Q04637 1599 aaKnown RBP22.97■■□□□ 1.27
PCK2-203ENST00000545054 ZNF316A6NFI3 1004 aaPredicted RBP22.95■■□□□ 1.26
PCK2-203ENST00000545054 WIZO95785 1651 aa22.91■■□□□ 1.26
PCK2-203ENST00000545054 NACADO15069 1562 aa22.9■■□□□ 1.26
PCK2-203ENST00000545054 BAZ1AQ9NRL2 1556 aaPredicted RBP22.84■■□□□ 1.25
PCK2-203ENST00000545054 CEP162Q5TB80 1403 aa22.84■■□□□ 1.25
PCK2-203ENST00000545054 YTHDC1Q96MU7 727 aaKnown RBP22.78■■□□□ 1.24
PCK2-203ENST00000545054 TTBK1Q5TCY1 1321 aaPredicted RBP22.76■■□□□ 1.23
PCK2-203ENST00000545054 TNIKQ9UKE5 1360 aa22.74■■□□□ 1.23
PCK2-203ENST00000545054 MIER1Q8N108 512 aa22.72■■□□□ 1.23
PCK2-203ENST00000545054 CCDC88BA6NC98 1476 aa22.7■■□□□ 1.22
PCK2-203ENST00000545054 ABCC8Q09428 1581 aa22.67■■□□□ 1.22
PCK2-203ENST00000545054 SOGA1O94964 1423 aa22.59■■□□□ 1.21
PCK2-203ENST00000545054 EEA1Q15075 1411 aa22.59■■□□□ 1.21
PCK2-203ENST00000545054 TOP2AP11388 1531 aaKnown RBP22.55■■□□□ 1.2
PCK2-203ENST00000545054 CSRNP3Q8WYN3 585 aa22.49■■□□□ 1.19
PCK2-203ENST00000545054 GOLGA3Q08378 1498 aa22.48■■□□□ 1.19
PCK2-203ENST00000545054 CLSPNQ9HAW4 1339 aa22.48■■□□□ 1.19
PCK2-203ENST00000545054 SMARCA2P51531 1590 aa22.46■■□□□ 1.19
PCK2-203ENST00000545054 RUSC2Q8N2Y8 1516 aa22.45■■□□□ 1.18
PCK2-203ENST00000545054 UBTFP17480 764 aaKnown RBP22.45■■□□□ 1.18
PCK2-203ENST00000545054 HNRNPUL2Q1KMD3 747 aaKnown RBP22.4■■□□□ 1.18
PCK2-203ENST00000545054 SUPT16HQ9Y5B9 1047 aaKnown RBP22.35■■□□□ 1.17
PCK2-203ENST00000545054 SMARCA4P51532 1647 aa22.33■■□□□ 1.17
PCK2-203ENST00000545054 UNC13AQ9UPW8 1703 aa22.29■■□□□ 1.16
PCK2-203ENST00000545054 KIF21BO75037 1637 aa22.27■■□□□ 1.16
PCK2-203ENST00000545054 CEP164Q9UPV0 1460 aa22.27■■□□□ 1.16
PCK2-203ENST00000545054 VPS8Q8N3P4 1428 aa22.26■■□□□ 1.15
PCK2-203ENST00000545054 CLIP1P30622 1438 aa22.24■■□□□ 1.15
PCK2-203ENST00000545054 TSHZ2Q9NRE2 1034 aa22.21■■□□□ 1.15
PCK2-203ENST00000545054 ANP32EQ9BTT0 268 aa22.18■■□□□ 1.14
PCK2-203ENST00000545054 DHX57Q6P158 1386 aaKnown RBP22.14■■□□□ 1.14
PCK2-203ENST00000545054 BAZ1BQ9UIG0 1483 aaKnown RBP22.13■■□□□ 1.13
PCK2-203ENST00000545054 APLP2Q06481 763 aa22.1■■□□□ 1.13
PCK2-203ENST00000545054 SYNJ1O43426 1573 aa22.07■■□□□ 1.12
PCK2-203ENST00000545054 PABPN1Q86U42 306 aaKnown RBP eCLIP22.03■■□□□ 1.12
PCK2-203ENST00000545054 BICRAQ9NZM4 1560 aa22.02■■□□□ 1.12
PCK2-203ENST00000545054 RAPGEF2Q9Y4G8 1499 aa22.01■■□□□ 1.11
PCK2-203ENST00000545054 BCL11AQ9H165 835 aa21.95■■□□□ 1.1
PCK2-203ENST00000545054 CUX2O14529 1486 aa21.89■■□□□ 1.1
PCK2-203ENST00000545054 RRBP1Q9P2E9 1410 aaKnown RBP21.87■■□□□ 1.09
PCK2-203ENST00000545054 PEG3Q9GZU2 1588 aa21.87■■□□□ 1.09
PCK2-203ENST00000545054 ARAP1Q96P48 1450 aa21.82■■□□□ 1.08
PCK2-203ENST00000545054 KCNH8Q96L42 1107 aa21.82■■□□□ 1.08
PCK2-203ENST00000545054 RANGAP1P46060 587 aaPredicted RBP21.8■■□□□ 1.08
PCK2-203ENST00000545054 ERICH3Q5RHP9 1530 aa21.78■■□□□ 1.08
PCK2-203ENST00000545054 KANK4Q5T7N3 995 aaPredicted RBP21.78■■□□□ 1.08
PCK2-203ENST00000545054 BCANQ96GW7 911 aa21.76■■□□□ 1.07
PCK2-203ENST00000545054 FKBP8Q14318 412 aa21.75■■□□□ 1.07
PCK2-203ENST00000545054 TOP2BQ02880 1626 aa21.72■■□□□ 1.07
PCK2-203ENST00000545054 PRXQ9BXM0 1461 aa21.72■■□□□ 1.07
PCK2-203ENST00000545054 CCNB3Q8WWL7 1395 aa21.7■■□□□ 1.06
PCK2-203ENST00000545054 MAPKBP1O60336 1514 aa21.7■■□□□ 1.06
PCK2-203ENST00000545054 RBM19Q9Y4C8 960 aaKnown RBP21.69■■□□□ 1.06
PCK2-203ENST00000545054 BIVM-ERCC5R4GMW8 1640 aa21.64■■□□□ 1.05
PCK2-203ENST00000545054 RAB3GAP2Q9H2M9 1393 aa21.61■■□□□ 1.05
PCK2-203ENST00000545054 NEFLP07196 543 aa21.6■■□□□ 1.05
PCK2-203ENST00000545054 DDX10Q13206 875 aaKnown RBP21.57■■□□□ 1.04
PCK2-203ENST00000545054 ATAD2BQ9ULI0 1458 aa21.57■■□□□ 1.04
PCK2-203ENST00000545054 WDR97A6NE52 1622 aa21.56■■□□□ 1.04
PCK2-203ENST00000545054 PPP1R15AO75807 674 aaPredicted RBP21.55■■□□□ 1.04
PCK2-203ENST00000545054 CCER2I3L3R5 266 aa21.53■■□□□ 1.04
PCK2-203ENST00000545054 ITGAEP38570 1179 aa21.51■■□□□ 1.03
PCK2-203ENST00000545054 ARHGAP35Q9NRY4 1499 aa21.51■■□□□ 1.03
PCK2-203ENST00000545054 SETD5Q9C0A6 1442 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms