RNA–Protein interactions for RNA: ENST00000544902.5

TFDP1-208, Transcript of transcription factor Dp-1, humanhuman

TSL 2

Gene TFDP1, Length 1,571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFDP1-208ENST00000544902 NISCHQ9Y2I1 1504 aa53.51■■■■■ 6.16
TFDP1-208ENST00000544902 CCDC180Q9P1Z9 1646 aa47.33■■■■■ 5.17
TFDP1-208ENST00000544902 ABCC9O60706 1549 aa46.18■■■■■ 4.98
TFDP1-208ENST00000544902 DCAF8L2P0C7V8 631 aa44.68■■■■■ 4.74
TFDP1-208ENST00000544902 ZCCHC6Q5VYS8 1495 aaKnown RBP44.64■■■■■ 4.74
TFDP1-208ENST00000544902 NACADO15069 1562 aa44.44■■■■■ 4.7
TFDP1-208ENST00000544902 RB1CC1Q8TDY2 1594 aa44.42■■■■■ 4.7
TFDP1-208ENST00000544902 MYO15BQ96JP2 1530 aa44.24■■■■■ 4.67
TFDP1-208ENST00000544902 DCAF1Q9Y4B6 1507 aa44.2■■■■■ 4.67
TFDP1-208ENST00000544902 UNC13AQ9UPW8 1703 aa43.55■■■■■ 4.56
TFDP1-208ENST00000544902 SCRIBQ14160 1630 aa43.35■■■■■ 4.53
TFDP1-208ENST00000544902 PABPN1Q86U42 306 aaKnown RBP eCLIP43.26■■■■■ 4.52
TFDP1-208ENST00000544902 BICRAQ9NZM4 1560 aa43.19■■■■■ 4.5
TFDP1-208ENST00000544902 SHROOM4Q9ULL8 1493 aa42.59■■■■■ 4.41
TFDP1-208ENST00000544902 DNAJC5BQ9UF47 199 aa42.21■■■■■ 4.35
TFDP1-208ENST00000544902 EIF4G1Q04637 1599 aaKnown RBP41.98■■■■■ 4.31
TFDP1-208ENST00000544902 CECR2Q9BXF3 1484 aa41.75■■■■■ 4.27
TFDP1-208ENST00000544902 CC2D2AQ9P2K1 1620 aa41.75■■■■■ 4.27
TFDP1-208ENST00000544902 SMARCA4P51532 1647 aa41.44■■■■■ 4.23
TFDP1-208ENST00000544902 BAZ1AQ9NRL2 1556 aaPredicted RBP41.4■■■■■ 4.22
TFDP1-208ENST00000544902 MROH2BQ7Z745 1585 aa41.31■■■■■ 4.2
TFDP1-208ENST00000544902 ATAD2BQ9ULI0 1458 aa41.16■■■■■ 4.18
TFDP1-208ENST00000544902 NCAPD3P42695 1498 aa41.05■■■■■ 4.16
TFDP1-208ENST00000544902 SMARCA2P51531 1590 aa41.04■■■■■ 4.16
TFDP1-208ENST00000544902 PEG3Q9GZU2 1588 aa41■■■■■ 4.15
TFDP1-208ENST00000544902 RSF1Q96T23 1441 aaPredicted RBP40.92■■■■■ 4.14
TFDP1-208ENST00000544902 WIZO95785 1651 aa40.89■■■■■ 4.14
TFDP1-208ENST00000544902 HMGXB3Q12766 1538 aa40.84■■■■■ 4.13
TFDP1-208ENST00000544902 BAZ1BQ9UIG0 1483 aaKnown RBP40.8■■■■■ 4.12
TFDP1-208ENST00000544902 TOP2AP11388 1531 aaKnown RBP40.38■■■■■ 4.05
TFDP1-208ENST00000544902 SUPT5HO00267 1087 aaKnown RBP40.19■■■■■ 4.02
TFDP1-208ENST00000544902 NESP48681 1621 aa40.1■■■■■ 4.01
TFDP1-208ENST00000544902 CCDC88BA6NC98 1476 aa39.97■■■■□ 3.99
TFDP1-208ENST00000544902 CADPSQ9ULU8 1353 aa39.89■■■■□ 3.98
TFDP1-208ENST00000544902 LAMC3Q9Y6N6 1575 aa39.88■■■■□ 3.98
TFDP1-208ENST00000544902 CFTRP13569 1480 aa39.71■■■■□ 3.95
TFDP1-208ENST00000544902 ERCC6Q03468 1493 aa39.69■■■■□ 3.94
TFDP1-208ENST00000544902 PDS5BQ9NTI5 1447 aa39.6■■■■□ 3.93
TFDP1-208ENST00000544902 KIF21AQ7Z4S6 1674 aa39.57■■■■□ 3.93
TFDP1-208ENST00000544902 FANCD2Q9BXW9 1451 aa39.44■■■■□ 3.9
TFDP1-208ENST00000544902 PRDM2Q13029 1718 aa39.39■■■■□ 3.9
TFDP1-208ENST00000544902 THOC2Q8NI27 1593 aaKnown RBP39.33■■■■□ 3.89
TFDP1-208ENST00000544902 CEP164Q9UPV0 1460 aa39.33■■■■□ 3.89
TFDP1-208ENST00000544902 MRC2Q9UBG0 1479 aa39.2■■■■□ 3.87
TFDP1-208ENST00000544902 CUX2O14529 1486 aa39.1■■■■□ 3.85
TFDP1-208ENST00000544902 WDR62O43379 1518 aa39.07■■■■□ 3.85
TFDP1-208ENST00000544902 URB2Q14146 1524 aaKnown RBP39.07■■■■□ 3.84
TFDP1-208ENST00000544902 TOPBP1Q92547 1522 aa38.86■■■■□ 3.81
TFDP1-208ENST00000544902 DNMBPQ6XZF7 1577 aa38.8■■■■□ 3.8
TFDP1-208ENST00000544902 ABCC8Q09428 1581 aa38.74■■■■□ 3.79
TFDP1-208ENST00000544902 CUX1P39880 1505 aa38.71■■■■□ 3.79
TFDP1-208ENST00000544902 POLA1P09884 1462 aaPredicted RBP38.56■■■■□ 3.76
TFDP1-208ENST00000544902 WRNQ14191 1432 aaPredicted RBP eCLIP38.53■■■■□ 3.76
TFDP1-208ENST00000544902 FGD5Q6ZNL6 1462 aa38.51■■■■□ 3.75
TFDP1-208ENST00000544902 SYNJ1O43426 1573 aa38.48■■■■□ 3.75
TFDP1-208ENST00000544902 IFT140Q96RY7 1462 aa38.47■■■■□ 3.75
TFDP1-208ENST00000544902 RAD54L2Q9Y4B4 1467 aa38.44■■■■□ 3.74
TFDP1-208ENST00000544902 TARBP1Q13395 1621 aaKnown RBP38.41■■■■□ 3.74
TFDP1-208ENST00000544902 TOP2BQ02880 1626 aa38.41■■■■□ 3.74
TFDP1-208ENST00000544902 BIVM-ERCC5R4GMW8 1640 aa38.4■■■■□ 3.74
TFDP1-208ENST00000544902 ZNF608Q9ULD9 1512 aaPredicted RBP38.4■■■■□ 3.74
TFDP1-208ENST00000544902 SOGA1O94964 1423 aa38.39■■■■□ 3.74
TFDP1-208ENST00000544902 AQRO60306 1485 aaKnown RBP eCLIP38.22■■■■□ 3.713e-9■■■■■ 31.5
TFDP1-208ENST00000544902 TDRD9Q8NDG6 1382 aaKnown RBP38.19■■■■□ 3.7
TFDP1-208ENST00000544902 EIF4G3O43432 1585 aaKnown RBP38.19■■■■□ 3.7
TFDP1-208ENST00000544902 WDR97A6NE52 1622 aa38.16■■■■□ 3.7
TFDP1-208ENST00000544902 ABCA10Q8WWZ4 1543 aa38.12■■■■□ 3.69
TFDP1-208ENST00000544902 ABCA5Q8WWZ7 1642 aa37.95■■■■□ 3.67
TFDP1-208ENST00000544902 GAPVD1Q14C86 1478 aa37.93■■■■□ 3.66
TFDP1-208ENST00000544902 TRIM41Q8WV44 630 aa37.86■■■■□ 3.65
TFDP1-208ENST00000544902 GRIN2BQ13224 1484 aa37.86■■■■□ 3.65
TFDP1-208ENST00000544902 PBRM1Q86U86 1689 aa37.85■■■■□ 3.65
TFDP1-208ENST00000544902 SNAPC4Q5SXM2 1469 aa37.82■■■■□ 3.65
TFDP1-208ENST00000544902 MAGI1Q96QZ7 1491 aaPredicted RBP37.7■■■■□ 3.63
TFDP1-208ENST00000544902 CHIC1Q5VXU3 224 aa37.68■■■■□ 3.62
TFDP1-208ENST00000544902 FBLN2P98095 1184 aa37.68■■■■□ 3.62
TFDP1-208ENST00000544902 CHD1O14646 1710 aa37.67■■■■□ 3.62
TFDP1-208ENST00000544902 KIF27Q86VH2 1401 aa37.66■■■■□ 3.62
TFDP1-208ENST00000544902 ERICH3Q5RHP9 1530 aa37.63■■■■□ 3.61
TFDP1-208ENST00000544902 DNAJC5Q9H3Z4 198 aa37.63■■■■□ 3.61
TFDP1-208ENST00000544902 RUSC2Q8N2Y8 1516 aa37.6■■■■□ 3.61
TFDP1-208ENST00000544902 OSCARQ8IYS5 282 aa37.6■■■■□ 3.61
TFDP1-208ENST00000544902 SYNJ2O15056 1496 aa37.58■■■■□ 3.61
TFDP1-208ENST00000544902 CHMP7Q8WUX9 453 aaPredicted RBP37.57■■■■□ 3.6
TFDP1-208ENST00000544902 ADAMTS12P58397 1594 aa37.56■■■■□ 3.6
TFDP1-208ENST00000544902 IGF1RP08069 1367 aa37.56■■■■□ 3.6
TFDP1-208ENST00000544902 FHAD1B1AJZ9 1412 aa37.48■■■■□ 3.59
TFDP1-208ENST00000544902 GRIN2AQ12879 1464 aa37.41■■■■□ 3.58
TFDP1-208ENST00000544902 CUL7Q14999 1698 aa37.34■■■■□ 3.57
TFDP1-208ENST00000544902 CARMIL1Q5VZK9 1371 aa37.31■■■■□ 3.56
TFDP1-208ENST00000544902 CEP170Q5SW79 1584 aa37.26■■■■□ 3.55
TFDP1-208ENST00000544902 CLASP1Q7Z460 1538 aa37.24■■■■□ 3.55
TFDP1-208ENST00000544902 NUP160Q12769 1436 aa37.22■■■■□ 3.55
TFDP1-208ENST00000544902 FAM9AQ8IZU1 332 aaPredicted RBP37.18■■■■□ 3.54
TFDP1-208ENST00000544902 CSRNP3Q8WYN3 585 aa37.12■■■■□ 3.53
TFDP1-208ENST00000544902 RAPGEF2Q9Y4G8 1499 aa37.1■■■■□ 3.53
TFDP1-208ENST00000544902 EEA1Q15075 1411 aa37.09■■■■□ 3.53
TFDP1-208ENST00000544902 PRXQ9BXM0 1461 aa37.07■■■■□ 3.53
TFDP1-208ENST00000544902 ARHGEF11O15085 1522 aa37.02■■■■□ 3.52
TFDP1-208ENST00000544902 RIMBP3CA6NJZ7 1639 aa37■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms