RNA–Protein interactions for RNA: ENST00000544714.3

TMX3-203, Transcript of thioredoxin related transmembrane protein 3, humanhuman

TSL 4

Gene TMX3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-203ENST00000544714 NISCHQ9Y2I1 1504 aa38.07■■■■□ 3.69
TMX3-203ENST00000544714 CCDC180Q9P1Z9 1646 aa33.68■■■□□ 2.98
TMX3-203ENST00000544714 ABCC9O60706 1549 aa32.37■■■□□ 2.77
TMX3-203ENST00000544714 ZCCHC6Q5VYS8 1495 aaKnown RBP31.86■■■□□ 2.69
TMX3-203ENST00000544714 DCAF1Q9Y4B6 1507 aa31.53■■■□□ 2.64
TMX3-203ENST00000544714 DCAF8L2P0C7V8 631 aa31.49■■■□□ 2.63
TMX3-203ENST00000544714 NACADO15069 1562 aa31.47■■■□□ 2.63
TMX3-203ENST00000544714 MYO15BQ96JP2 1530 aa31.45■■■□□ 2.63
TMX3-203ENST00000544714 RB1CC1Q8TDY2 1594 aa31.39■■■□□ 2.61
TMX3-203ENST00000544714 UNC13AQ9UPW8 1703 aa30.81■■■□□ 2.52
TMX3-203ENST00000544714 SCRIBQ14160 1630 aa30.77■■■□□ 2.52
TMX3-203ENST00000544714 BICRAQ9NZM4 1560 aa30.45■■■□□ 2.47
TMX3-203ENST00000544714 SHROOM4Q9ULL8 1493 aa30.39■■■□□ 2.46
TMX3-203ENST00000544714 PABPN1Q86U42 306 aaKnown RBP eCLIP30.29■■■□□ 2.44
TMX3-203ENST00000544714 CECR2Q9BXF3 1484 aa29.61■■■□□ 2.33
TMX3-203ENST00000544714 EIF4G1Q04637 1599 aaKnown RBP29.6■■■□□ 2.33
TMX3-203ENST00000544714 BAZ1AQ9NRL2 1556 aaPredicted RBP29.48■■■□□ 2.31
TMX3-203ENST00000544714 SMARCA4P51532 1647 aa29.48■■■□□ 2.31
TMX3-203ENST00000544714 MROH2BQ7Z745 1585 aa29.38■■■□□ 2.29
TMX3-203ENST00000544714 CC2D2AQ9P2K1 1620 aa29.34■■■□□ 2.29
TMX3-203ENST00000544714 RSF1Q96T23 1441 aaPredicted RBP29.2■■■□□ 2.27
TMX3-203ENST00000544714 DNAJC5BQ9UF47 199 aa29.17■■■□□ 2.26
TMX3-203ENST00000544714 PEG3Q9GZU2 1588 aa29.16■■■□□ 2.26
TMX3-203ENST00000544714 SMARCA2P51531 1590 aa29.13■■■□□ 2.25
TMX3-203ENST00000544714 ATAD2BQ9ULI0 1458 aa29.12■■■□□ 2.25
TMX3-203ENST00000544714 WIZO95785 1651 aa29.12■■■□□ 2.25
TMX3-203ENST00000544714 NCAPD3P42695 1498 aa29■■■□□ 2.23
TMX3-203ENST00000544714 HMGXB3Q12766 1538 aa28.97■■■□□ 2.23
TMX3-203ENST00000544714 BAZ1BQ9UIG0 1483 aaKnown RBP28.93■■■□□ 2.22
TMX3-203ENST00000544714 TOP2AP11388 1531 aaKnown RBP28.82■■■□□ 2.2
TMX3-203ENST00000544714 SUPT5HO00267 1087 aaKnown RBP28.81■■■□□ 2.2
TMX3-203ENST00000544714 CCDC88BA6NC98 1476 aa28.44■■■□□ 2.14
TMX3-203ENST00000544714 LAMC3Q9Y6N6 1575 aa28.2■■■□□ 2.11
TMX3-203ENST00000544714 NESP48681 1621 aa28.19■■■□□ 2.1
TMX3-203ENST00000544714 CADPSQ9ULU8 1353 aa28.17■■■□□ 2.1
TMX3-203ENST00000544714 CFTRP13569 1480 aa28.15■■■□□ 2.1
TMX3-203ENST00000544714 PRDM2Q13029 1718 aa28.12■■■□□ 2.09
TMX3-203ENST00000544714 KIF21AQ7Z4S6 1674 aa27.94■■■□□ 2.06
TMX3-203ENST00000544714 PDS5BQ9NTI5 1447 aa27.93■■■□□ 2.06
TMX3-203ENST00000544714 FANCD2Q9BXW9 1451 aa27.89■■■□□ 2.06
TMX3-203ENST00000544714 ERCC6Q03468 1493 aa27.84■■■□□ 2.05
TMX3-203ENST00000544714 CEP164Q9UPV0 1460 aa27.82■■■□□ 2.04
TMX3-203ENST00000544714 THOC2Q8NI27 1593 aaKnown RBP27.7■■■□□ 2.03
TMX3-203ENST00000544714 MRC2Q9UBG0 1479 aa27.66■■■□□ 2.02
TMX3-203ENST00000544714 ABCC8Q09428 1581 aa27.62■■■□□ 2.01
TMX3-203ENST00000544714 URB2Q14146 1524 aaKnown RBP27.61■■■□□ 2.01
TMX3-203ENST00000544714 WDR62O43379 1518 aa27.57■■■□□ 2
TMX3-203ENST00000544714 DNMBPQ6XZF7 1577 aa27.56■■■□□ 2
TMX3-203ENST00000544714 CUX1P39880 1505 aa27.54■■■□□ 2
TMX3-203ENST00000544714 TOPBP1Q92547 1522 aa27.52■■■□□ 2
TMX3-203ENST00000544714 WRNQ14191 1432 aaPredicted RBP eCLIP27.51■■□□□ 1.99
TMX3-203ENST00000544714 SYNJ1O43426 1573 aa27.48■■□□□ 1.99
TMX3-203ENST00000544714 BIVM-ERCC5R4GMW8 1640 aa27.47■■□□□ 1.99
TMX3-203ENST00000544714 TOP2BQ02880 1626 aa27.45■■□□□ 1.98
TMX3-203ENST00000544714 CUX2O14529 1486 aa27.36■■□□□ 1.97
TMX3-203ENST00000544714 FGD5Q6ZNL6 1462 aa27.34■■□□□ 1.97
TMX3-203ENST00000544714 POLA1P09884 1462 aaPredicted RBP27.32■■□□□ 1.96
TMX3-203ENST00000544714 CHIC1Q5VXU3 224 aa27.22■■□□□ 1.95
TMX3-203ENST00000544714 TARBP1Q13395 1621 aaKnown RBP27.21■■□□□ 1.95
TMX3-203ENST00000544714 IFT140Q96RY7 1462 aa27.19■■□□□ 1.94
TMX3-203ENST00000544714 RAD54L2Q9Y4B4 1467 aa27.19■■□□□ 1.94
TMX3-203ENST00000544714 WDR97A6NE52 1622 aa27.17■■□□□ 1.94
TMX3-203ENST00000544714 TRIM41Q8WV44 630 aa27.17■■□□□ 1.94
TMX3-203ENST00000544714 SOGA1O94964 1423 aa27.16■■□□□ 1.94
TMX3-203ENST00000544714 ABCA10Q8WWZ4 1543 aa27.09■■□□□ 1.93
TMX3-203ENST00000544714 ZNF608Q9ULD9 1512 aaPredicted RBP27.05■■□□□ 1.92
TMX3-203ENST00000544714 EIF4G3O43432 1585 aaKnown RBP27.01■■□□□ 1.92
TMX3-203ENST00000544714 ABCA5Q8WWZ7 1642 aa26.98■■□□□ 1.91
TMX3-203ENST00000544714 TDRD9Q8NDG6 1382 aaKnown RBP26.96■■□□□ 1.91
TMX3-203ENST00000544714 AQRO60306 1485 aaKnown RBP eCLIP26.93■■□□□ 1.94e-8■■■■□ 24.7
TMX3-203ENST00000544714 PBRM1Q86U86 1689 aa26.91■■□□□ 1.9
TMX3-203ENST00000544714 GAPVD1Q14C86 1478 aa26.89■■□□□ 1.9
TMX3-203ENST00000544714 KIF27Q86VH2 1401 aa26.88■■□□□ 1.89
TMX3-203ENST00000544714 RUSC2Q8N2Y8 1516 aa26.84■■□□□ 1.89
TMX3-203ENST00000544714 GRIN2BQ13224 1484 aa26.81■■□□□ 1.88
TMX3-203ENST00000544714 ERICH3Q5RHP9 1530 aa26.78■■□□□ 1.88
TMX3-203ENST00000544714 SNAPC4Q5SXM2 1469 aa26.74■■□□□ 1.87
TMX3-203ENST00000544714 EEA1Q15075 1411 aa26.73■■□□□ 1.87
TMX3-203ENST00000544714 MAGI1Q96QZ7 1491 aaPredicted RBP26.7■■□□□ 1.87
TMX3-203ENST00000544714 ADAMTS12P58397 1594 aa26.69■■□□□ 1.86
TMX3-203ENST00000544714 CUL7Q14999 1698 aa26.69■■□□□ 1.86
TMX3-203ENST00000544714 IGF1RP08069 1367 aa26.69■■□□□ 1.86
TMX3-203ENST00000544714 FAM9AQ8IZU1 332 aaPredicted RBP26.62■■□□□ 1.85
TMX3-203ENST00000544714 CHD1O14646 1710 aa26.6■■□□□ 1.85
TMX3-203ENST00000544714 FHAD1B1AJZ9 1412 aa26.59■■□□□ 1.85
TMX3-203ENST00000544714 SYNJ2O15056 1496 aa26.59■■□□□ 1.85
TMX3-203ENST00000544714 CSRNP3Q8WYN3 585 aa26.56■■□□□ 1.84
TMX3-203ENST00000544714 CARMIL1Q5VZK9 1371 aa26.55■■□□□ 1.84
TMX3-203ENST00000544714 PRXQ9BXM0 1461 aa26.53■■□□□ 1.84
TMX3-203ENST00000544714 GRIN2AQ12879 1464 aa26.49■■□□□ 1.83
TMX3-203ENST00000544714 KIF21BO75037 1637 aa26.48■■□□□ 1.83
TMX3-203ENST00000544714 RAPGEF2Q9Y4G8 1499 aa26.48■■□□□ 1.83
TMX3-203ENST00000544714 CHMP7Q8WUX9 453 aaPredicted RBP26.46■■□□□ 1.83
TMX3-203ENST00000544714 FBLN2P98095 1184 aa26.45■■□□□ 1.82
TMX3-203ENST00000544714 CEP170Q5SW79 1584 aa26.37■■□□□ 1.81
TMX3-203ENST00000544714 NUP160Q12769 1436 aa26.35■■□□□ 1.81
TMX3-203ENST00000544714 GOLGA3Q08378 1498 aa26.33■■□□□ 1.81
TMX3-203ENST00000544714 CTTNBP2Q8WZ74 1663 aa26.31■■□□□ 1.8
TMX3-203ENST00000544714 CLASP1Q7Z460 1538 aa26.27■■□□□ 1.8
TMX3-203ENST00000544714 OSCARQ8IYS5 282 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms