RNA–Protein interactions for RNA: ENST00000544531.5

ECHDC2-226, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 4

Gene ECHDC2, Length 548 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-226ENST00000544531 NISCHQ9Y2I1 1504 aa39.36■■■■□ 3.89
ECHDC2-226ENST00000544531 ABCC9O60706 1549 aa35.22■■■■□ 3.23
ECHDC2-226ENST00000544531 CCDC180Q9P1Z9 1646 aa35.21■■■■□ 3.23
ECHDC2-226ENST00000544531 RB1CC1Q8TDY2 1594 aa33.48■■■□□ 2.95
ECHDC2-226ENST00000544531 DCAF8L2P0C7V8 631 aa33.33■■■□□ 2.93
ECHDC2-226ENST00000544531 NACADO15069 1562 aa33.27■■■□□ 2.92
ECHDC2-226ENST00000544531 DNAJC5BQ9UF47 199 aa32.97■■■□□ 2.87
ECHDC2-226ENST00000544531 PABPN1Q86U42 306 aaKnown RBP eCLIP32.87■■■□□ 2.85
ECHDC2-226ENST00000544531 MYO15BQ96JP2 1530 aa32.8■■■□□ 2.84
ECHDC2-226ENST00000544531 UNC13AQ9UPW8 1703 aa32.79■■■□□ 2.84
ECHDC2-226ENST00000544531 ZCCHC6Q5VYS8 1495 aaKnown RBP32.63■■■□□ 2.81
ECHDC2-226ENST00000544531 BICRAQ9NZM4 1560 aa32.54■■■□□ 2.8
ECHDC2-226ENST00000544531 DCAF1Q9Y4B6 1507 aa32.45■■■□□ 2.78
ECHDC2-226ENST00000544531 SCRIBQ14160 1630 aa32.2■■■□□ 2.75
ECHDC2-226ENST00000544531 SHROOM4Q9ULL8 1493 aa31.98■■■□□ 2.71
ECHDC2-226ENST00000544531 CC2D2AQ9P2K1 1620 aa31.78■■■□□ 2.68
ECHDC2-226ENST00000544531 EIF4G1Q04637 1599 aaKnown RBP31.73■■■□□ 2.67
ECHDC2-226ENST00000544531 CECR2Q9BXF3 1484 aa31.67■■■□□ 2.66
ECHDC2-226ENST00000544531 NCAPD3P42695 1498 aa30.73■■■□□ 2.51
ECHDC2-226ENST00000544531 ATAD2BQ9ULI0 1458 aa30.69■■■□□ 2.5
ECHDC2-226ENST00000544531 SMARCA4P51532 1647 aa30.69■■■□□ 2.5
ECHDC2-226ENST00000544531 SMARCA2P51531 1590 aa30.57■■■□□ 2.48
ECHDC2-226ENST00000544531 BAZ1AQ9NRL2 1556 aaPredicted RBP30.53■■■□□ 2.48
ECHDC2-226ENST00000544531 HMGXB3Q12766 1538 aa30.48■■■□□ 2.47
ECHDC2-226ENST00000544531 BAZ1BQ9UIG0 1483 aaKnown RBP30.39■■■□□ 2.46
ECHDC2-226ENST00000544531 MROH2BQ7Z745 1585 aa30.38■■■□□ 2.45
ECHDC2-226ENST00000544531 ERCC6Q03468 1493 aa30.37■■■□□ 2.45
ECHDC2-226ENST00000544531 PEG3Q9GZU2 1588 aa30.32■■■□□ 2.45
ECHDC2-226ENST00000544531 NESP48681 1621 aa30.3■■■□□ 2.44
ECHDC2-226ENST00000544531 CUX2O14529 1486 aa30.19■■■□□ 2.42
ECHDC2-226ENST00000544531 DNAJC5Q9H3Z4 198 aa30.11■■■□□ 2.41
ECHDC2-226ENST00000544531 WIZO95785 1651 aa30.04■■■□□ 2.4
ECHDC2-226ENST00000544531 LAMC3Q9Y6N6 1575 aa30.01■■■□□ 2.39
ECHDC2-226ENST00000544531 THOC2Q8NI27 1593 aaKnown RBP29.9■■■□□ 2.38
ECHDC2-226ENST00000544531 KIF21AQ7Z4S6 1674 aa29.88■■■□□ 2.37
ECHDC2-226ENST00000544531 PDS5BQ9NTI5 1447 aa29.85■■■□□ 2.37
ECHDC2-226ENST00000544531 CADPSQ9ULU8 1353 aa29.83■■■□□ 2.37
ECHDC2-226ENST00000544531 RSF1Q96T23 1441 aaPredicted RBP29.79■■■□□ 2.36
ECHDC2-226ENST00000544531 MRC2Q9UBG0 1479 aa29.6■■■□□ 2.33
ECHDC2-226ENST00000544531 TOP2AP11388 1531 aaKnown RBP29.6■■■□□ 2.33
ECHDC2-226ENST00000544531 CEP164Q9UPV0 1460 aa29.51■■■□□ 2.31
ECHDC2-226ENST00000544531 WDR62O43379 1518 aa29.5■■■□□ 2.31
ECHDC2-226ENST00000544531 CFTRP13569 1480 aa29.5■■■□□ 2.31
ECHDC2-226ENST00000544531 FANCD2Q9BXW9 1451 aa29.5■■■□□ 2.31
ECHDC2-226ENST00000544531 CCDC88BA6NC98 1476 aa29.31■■■□□ 2.28
ECHDC2-226ENST00000544531 URB2Q14146 1524 aaKnown RBP29.26■■■□□ 2.27
ECHDC2-226ENST00000544531 PRDM2Q13029 1718 aa29.2■■■□□ 2.26
ECHDC2-226ENST00000544531 TOPBP1Q92547 1522 aa28.96■■■□□ 2.23
ECHDC2-226ENST00000544531 TRIM41Q8WV44 630 aa28.93■■■□□ 2.22
ECHDC2-226ENST00000544531 ZNF608Q9ULD9 1512 aaPredicted RBP28.91■■■□□ 2.22
ECHDC2-226ENST00000544531 OSCARQ8IYS5 282 aa28.91■■■□□ 2.22
ECHDC2-226ENST00000544531 IFT140Q96RY7 1462 aa28.9■■■□□ 2.22
ECHDC2-226ENST00000544531 ABCC8Q09428 1581 aa28.84■■■□□ 2.21
ECHDC2-226ENST00000544531 DNMBPQ6XZF7 1577 aa28.84■■■□□ 2.21
ECHDC2-226ENST00000544531 EIF4G3O43432 1585 aaKnown RBP28.71■■■□□ 2.19
ECHDC2-226ENST00000544531 TARBP1Q13395 1621 aaKnown RBP28.69■■■□□ 2.18
ECHDC2-226ENST00000544531 AQRO60306 1485 aaKnown RBP eCLIP28.67■■■□□ 2.183e-6■■□□□ 13.8
ECHDC2-226ENST00000544531 POLA1P09884 1462 aaPredicted RBP28.67■■■□□ 2.18
ECHDC2-226ENST00000544531 SUPT5HO00267 1087 aaKnown RBP28.67■■■□□ 2.18
ECHDC2-226ENST00000544531 RAD54L2Q9Y4B4 1467 aa28.62■■■□□ 2.17
ECHDC2-226ENST00000544531 SOGA1O94964 1423 aa28.56■■■□□ 2.16
ECHDC2-226ENST00000544531 CUX1P39880 1505 aa28.53■■■□□ 2.16
ECHDC2-226ENST00000544531 FGD5Q6ZNL6 1462 aa28.53■■■□□ 2.16
ECHDC2-226ENST00000544531 TDRD9Q8NDG6 1382 aaKnown RBP28.52■■■□□ 2.16
ECHDC2-226ENST00000544531 RIMBP3CA6NJZ7 1639 aa28.51■■■□□ 2.15
ECHDC2-226ENST00000544531 RIMBP3BA6NNM3 1639 aa28.51■■■□□ 2.15
ECHDC2-226ENST00000544531 RIMBP3Q9UFD9 1639 aa28.51■■■□□ 2.15
ECHDC2-226ENST00000544531 CHD1O14646 1710 aa28.5■■■□□ 2.15
ECHDC2-226ENST00000544531 FBLN2P98095 1184 aa28.5■■■□□ 2.15
ECHDC2-226ENST00000544531 ARHGEF11O15085 1522 aa28.43■■■□□ 2.14
ECHDC2-226ENST00000544531 SNAPC4Q5SXM2 1469 aa28.35■■■□□ 2.13
ECHDC2-226ENST00000544531 WDR97A6NE52 1622 aa28.3■■■□□ 2.12
ECHDC2-226ENST00000544531 CYB5RLQ6IPT4 315 aa28.29■■■□□ 2.12
ECHDC2-226ENST00000544531 GRIN2BQ13224 1484 aa28.27■■■□□ 2.12
ECHDC2-226ENST00000544531 CHMP7Q8WUX9 453 aaPredicted RBP28.26■■■□□ 2.11
ECHDC2-226ENST00000544531 MAGI1Q96QZ7 1491 aaPredicted RBP28.23■■■□□ 2.11
ECHDC2-226ENST00000544531 GAPVD1Q14C86 1478 aa28.21■■■□□ 2.11
ECHDC2-226ENST00000544531 PBRM1Q86U86 1689 aa28.17■■■□□ 2.1
ECHDC2-226ENST00000544531 ARAP1Q96P48 1450 aa28.17■■■□□ 2.1
ECHDC2-226ENST00000544531 ABCA10Q8WWZ4 1543 aa28.17■■■□□ 2.1
ECHDC2-226ENST00000544531 SYNJ2O15056 1496 aa28.15■■■□□ 2.1
ECHDC2-226ENST00000544531 CLASP1Q7Z460 1538 aa28.13■■■□□ 2.09
ECHDC2-226ENST00000544531 SYNJ1O43426 1573 aa28.12■■■□□ 2.09
ECHDC2-226ENST00000544531 ABCA5Q8WWZ7 1642 aa28.12■■■□□ 2.09
ECHDC2-226ENST00000544531 WRNQ14191 1432 aaPredicted RBP eCLIP28.09■■■□□ 2.09
ECHDC2-226ENST00000544531 TOP2BQ02880 1626 aa28.07■■■□□ 2.08
ECHDC2-226ENST00000544531 BIVM-ERCC5R4GMW8 1640 aa28.06■■■□□ 2.08
ECHDC2-226ENST00000544531 TRHP20396 242 aaPredicted RBP27.94■■■□□ 2.06
ECHDC2-226ENST00000544531 GRIN2AQ12879 1464 aa27.91■■■□□ 2.06
ECHDC2-226ENST00000544531 ADAMTS12P58397 1594 aa27.9■■■□□ 2.06
ECHDC2-226ENST00000544531 FHAD1B1AJZ9 1412 aa27.83■■■□□ 2.05
ECHDC2-226ENST00000544531 CEP170Q5SW79 1584 aa27.82■■■□□ 2.04
ECHDC2-226ENST00000544531 ERICH3Q5RHP9 1530 aa27.8■■■□□ 2.04
ECHDC2-226ENST00000544531 ERCC6L2Q5T890 1561 aa27.79■■■□□ 2.04
ECHDC2-226ENST00000544531 NUP160Q12769 1436 aa27.79■■■□□ 2.04
ECHDC2-226ENST00000544531 SHROOM2Q13796 1616 aa27.65■■■□□ 2.02
ECHDC2-226ENST00000544531 JPH4Q96JJ6 628 aa27.57■■■□□ 2
ECHDC2-226ENST00000544531 PRG4Q92954 1404 aaPredicted RBP27.57■■■□□ 2
ECHDC2-226ENST00000544531 IGF1RP08069 1367 aa27.54■■■□□ 2
ECHDC2-226ENST00000544531 KIF27Q86VH2 1401 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms