RNA–Protein interactions for RNA: ENST00000544182.1

HMBS-219, Transcript of hydroxymethylbilane synthase, humanhuman

TSL 2

Gene HMBS, Length 1,542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBS-219ENST00000544182 NISCHQ9Y2I1 1504 aa30.85■■■□□ 2.53
HMBS-219ENST00000544182 AEBP2Q6ZN18 517 aaPredicted RBP30.65■■■□□ 2.5
HMBS-219ENST00000544182 CHIC1Q5VXU3 224 aa29.5■■■□□ 2.31
HMBS-219ENST00000544182 CCDC180Q9P1Z9 1646 aa26.9■■□□□ 1.9
HMBS-219ENST00000544182 SENP3Q9H4L4 574 aaPredicted RBP26.04■■□□□ 1.76
HMBS-219ENST00000544182 PHF23Q9BUL5 403 aaPredicted RBP25.93■■□□□ 1.74
HMBS-219ENST00000544182 ZCCHC6Q5VYS8 1495 aaKnown RBP25.91■■□□□ 1.74
HMBS-219ENST00000544182 DCAF1Q9Y4B6 1507 aa25.57■■□□□ 1.68
HMBS-219ENST00000544182 DCAF8L2P0C7V8 631 aa25.4■■□□□ 1.66
HMBS-219ENST00000544182 ABCC9O60706 1549 aa25.38■■□□□ 1.65
HMBS-219ENST00000544182 MYO15BQ96JP2 1530 aa25.3■■□□□ 1.64
HMBS-219ENST00000544182 NACADO15069 1562 aa25.08■■□□□ 1.61
HMBS-219ENST00000544182 SHROOM4Q9ULL8 1493 aa25.03■■□□□ 1.6
HMBS-219ENST00000544182 RB1CC1Q8TDY2 1594 aa24.84■■□□□ 1.57
HMBS-219ENST00000544182 SCRIBQ14160 1630 aa24.65■■□□□ 1.54
HMBS-219ENST00000544182 UNC13AQ9UPW8 1703 aa24.26■■□□□ 1.47
HMBS-219ENST00000544182 FOXD1Q16676 465 aa24.25■■□□□ 1.47
HMBS-219ENST00000544182 SUPT5HO00267 1087 aaKnown RBP24.12■■□□□ 1.45
HMBS-219ENST00000544182 BICRAQ9NZM4 1560 aa24.07■■□□□ 1.44
HMBS-219ENST00000544182 PABPN1Q86U42 306 aaKnown RBP eCLIP23.94■■□□□ 1.42
HMBS-219ENST00000544182 CECR2Q9BXF3 1484 aa23.94■■□□□ 1.42
HMBS-219ENST00000544182 RSF1Q96T23 1441 aaPredicted RBP23.92■■□□□ 1.42
HMBS-219ENST00000544182 BAZ1AQ9NRL2 1556 aaPredicted RBP23.82■■□□□ 1.4
HMBS-219ENST00000544182 MROH2BQ7Z745 1585 aa23.79■■□□□ 1.4
HMBS-219ENST00000544182 PLPPR3Q6T4P5 718 aa23.76■■□□□ 1.39
HMBS-219ENST00000544182 SMARCA4P51532 1647 aa23.69■■□□□ 1.38
HMBS-219ENST00000544182 WIZO95785 1651 aa23.57■■□□□ 1.36
HMBS-219ENST00000544182 PEG3Q9GZU2 1588 aa23.46■■□□□ 1.35
HMBS-219ENST00000544182 TOP2AP11388 1531 aaKnown RBP23.38■■□□□ 1.33
HMBS-219ENST00000544182 EIF4G1Q04637 1599 aaKnown RBP23.35■■□□□ 1.33
HMBS-219ENST00000544182 ATAD2BQ9ULI0 1458 aa23.34■■□□□ 1.33
HMBS-219ENST00000544182 SMARCA2P51531 1590 aa23.33■■□□□ 1.33
HMBS-219ENST00000544182 NCAPD3P42695 1498 aa23.18■■□□□ 1.3
HMBS-219ENST00000544182 BAZ1BQ9UIG0 1483 aaKnown RBP23.18■■□□□ 1.3
HMBS-219ENST00000544182 CCDC88BA6NC98 1476 aa23.14■■□□□ 1.3
HMBS-219ENST00000544182 HMGXB3Q12766 1538 aa23.12■■□□□ 1.29
HMBS-219ENST00000544182 PPP6R1Q9UPN7 881 aa23.01■■□□□ 1.27
HMBS-219ENST00000544182 CC2D2AQ9P2K1 1620 aa22.99■■□□□ 1.27
HMBS-219ENST00000544182 ADRA2BP18089 450 aa22.96■■□□□ 1.27
HMBS-219ENST00000544182 PIAS4Q8N2W9 510 aaPredicted RBP22.75■■□□□ 1.23
HMBS-219ENST00000544182 TRIM41Q8WV44 630 aa22.74■■□□□ 1.23
HMBS-219ENST00000544182 CFTRP13569 1480 aa22.64■■□□□ 1.21
HMBS-219ENST00000544182 ABCC8Q09428 1581 aa22.58■■□□□ 1.2
HMBS-219ENST00000544182 CADPSQ9ULU8 1353 aa22.57■■□□□ 1.2
HMBS-219ENST00000544182 WRNQ14191 1432 aaPredicted RBP eCLIP22.52■■□□□ 1.2
HMBS-219ENST00000544182 MSH5O43196 834 aa22.49■■□□□ 1.19
HMBS-219ENST00000544182 PRDM2Q13029 1718 aa22.44■■□□□ 1.18
HMBS-219ENST00000544182 DNAJC5BQ9UF47 199 aa22.42■■□□□ 1.18
HMBS-219ENST00000544182 SYNJ1O43426 1573 aa22.37■■□□□ 1.17
HMBS-219ENST00000544182 LAMC3Q9Y6N6 1575 aa22.35■■□□□ 1.17
HMBS-219ENST00000544182 TOP2BQ02880 1626 aa22.33■■□□□ 1.17
HMBS-219ENST00000544182 BIVM-ERCC5R4GMW8 1640 aa22.29■■□□□ 1.16
HMBS-219ENST00000544182 NESP48681 1621 aa22.28■■□□□ 1.16
HMBS-219ENST00000544182 FANCD2Q9BXW9 1451 aa22.27■■□□□ 1.16
HMBS-219ENST00000544182 CUX1P39880 1505 aa22.25■■□□□ 1.15
HMBS-219ENST00000544182 EEA1Q15075 1411 aa22.24■■□□□ 1.15
HMBS-219ENST00000544182 FAM9AQ8IZU1 332 aaPredicted RBP22.24■■□□□ 1.15
HMBS-219ENST00000544182 LOC105371045A0A1W2PR82 267 aa22.21■■□□□ 1.15
HMBS-219ENST00000544182 PDS5BQ9NTI5 1447 aa22.2■■□□□ 1.14
HMBS-219ENST00000544182 SOGA1O94964 1423 aa22.19■■□□□ 1.14
HMBS-219ENST00000544182 CEP164Q9UPV0 1460 aa22.12■■□□□ 1.13
HMBS-219ENST00000544182 CSRNP3Q8WYN3 585 aa22.1■■□□□ 1.13
HMBS-219ENST00000544182 RUSC2Q8N2Y8 1516 aa22.1■■□□□ 1.13
HMBS-219ENST00000544182 DNMBPQ6XZF7 1577 aa22.08■■□□□ 1.12
HMBS-219ENST00000544182 TOPBP1Q92547 1522 aa22.03■■□□□ 1.12
HMBS-219ENST00000544182 FGD5Q6ZNL6 1462 aa22.01■■□□□ 1.11
HMBS-219ENST00000544182 KIF21AQ7Z4S6 1674 aa21.99■■□□□ 1.11
HMBS-219ENST00000544182 URB2Q14146 1524 aaKnown RBP21.98■■□□□ 1.11
HMBS-219ENST00000544182 KIF27Q86VH2 1401 aa21.96■■□□□ 1.11
HMBS-219ENST00000544182 POLA1P09884 1462 aaPredicted RBP21.92■■□□□ 1.1
HMBS-219ENST00000544182 KIF21BO75037 1637 aa21.89■■□□□ 1.09
HMBS-219ENST00000544182 MRC2Q9UBG0 1479 aa21.88■■□□□ 1.09
HMBS-219ENST00000544182 GOLGA3Q08378 1498 aa21.88■■□□□ 1.09
HMBS-219ENST00000544182 CUX2O14529 1486 aa21.87■■□□□ 1.09
HMBS-219ENST00000544182 ABCA10Q8WWZ4 1543 aa21.86■■□□□ 1.09
HMBS-219ENST00000544182 EHMT2Q96KQ7 1210 aa21.85■■□□□ 1.09
HMBS-219ENST00000544182 TNIKQ9UKE5 1360 aa21.84■■□□□ 1.09
HMBS-219ENST00000544182 RAD54L2Q9Y4B4 1467 aa21.83■■□□□ 1.08
HMBS-219ENST00000544182 PRXQ9BXM0 1461 aa21.82■■□□□ 1.08
HMBS-219ENST00000544182 IGF1RP08069 1367 aa21.78■■□□□ 1.08
HMBS-219ENST00000544182 ERCC6Q03468 1493 aa21.78■■□□□ 1.08
HMBS-219ENST00000544182 WDR62O43379 1518 aa21.77■■□□□ 1.08
HMBS-219ENST00000544182 ERICH3Q5RHP9 1530 aa21.77■■□□□ 1.08
HMBS-219ENST00000544182 UBTFP17480 764 aaKnown RBP21.76■■□□□ 1.07
HMBS-219ENST00000544182 RAPGEF2Q9Y4G8 1499 aa21.75■■□□□ 1.07
HMBS-219ENST00000544182 WDR97A6NE52 1622 aa21.73■■□□□ 1.07
HMBS-219ENST00000544182 TARBP1Q13395 1621 aaKnown RBP21.69■■□□□ 1.06
HMBS-219ENST00000544182 THOC2Q8NI27 1593 aaKnown RBP21.67■■□□□ 1.06
HMBS-219ENST00000544182 CEP162Q5TB80 1403 aa21.66■■□□□ 1.06
HMBS-219ENST00000544182 CARMIL1Q5VZK9 1371 aa21.66■■□□□ 1.06
HMBS-219ENST00000544182 ABCA5Q8WWZ7 1642 aa21.64■■□□□ 1.05
HMBS-219ENST00000544182 IFT140Q96RY7 1462 aa21.64■■□□□ 1.05
HMBS-219ENST00000544182 TDRD9Q8NDG6 1382 aaKnown RBP21.63■■□□□ 1.05
HMBS-219ENST00000544182 GAPVD1Q14C86 1478 aa21.62■■□□□ 1.05
HMBS-219ENST00000544182 CUL7Q14999 1698 aa21.57■■□□□ 1.04
HMBS-219ENST00000544182 CLIP1P30622 1438 aa21.52■■□□□ 1.04
HMBS-219ENST00000544182 AQRO60306 1485 aaKnown RBP eCLIP21.49■■□□□ 1.032e-7■■■■□ 20.6
HMBS-219ENST00000544182 GRIN2BQ13224 1484 aa21.46■■□□□ 1.03
HMBS-219ENST00000544182 ZNF608Q9ULD9 1512 aaPredicted RBP21.45■■□□□ 1.02
HMBS-219ENST00000544182 PBRM1Q86U86 1689 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms