RNA–Protein interactions for RNA: ENST00000544177.1

JPH4-203, Transcript of junctophilin 4, humanhuman

TSL 2 BASIC

Gene JPH4, Length 1,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JPH4-203ENST00000544177 NISCHQ9Y2I1 1504 aa40.58■■■■■ 4.09
JPH4-203ENST00000544177 CCDC180Q9P1Z9 1646 aa36.22■■■■□ 3.39
JPH4-203ENST00000544177 ABCC9O60706 1549 aa35.91■■■■□ 3.34
JPH4-203ENST00000544177 RB1CC1Q8TDY2 1594 aa34.33■■■■□ 3.09
JPH4-203ENST00000544177 NACADO15069 1562 aa34.19■■■■□ 3.06
JPH4-203ENST00000544177 DCAF8L2P0C7V8 631 aa34.12■■■■□ 3.05
JPH4-203ENST00000544177 MYO15BQ96JP2 1530 aa33.87■■■■□ 3.01
JPH4-203ENST00000544177 ZCCHC6Q5VYS8 1495 aaKnown RBP33.69■■■□□ 2.98
JPH4-203ENST00000544177 DNAJC5BQ9UF47 199 aa33.56■■■□□ 2.96
JPH4-203ENST00000544177 DCAF1Q9Y4B6 1507 aa33.56■■■□□ 2.96
JPH4-203ENST00000544177 PABPN1Q86U42 306 aaKnown RBP eCLIP33.52■■■□□ 2.96
JPH4-203ENST00000544177 UNC13AQ9UPW8 1703 aa33.5■■■□□ 2.95
JPH4-203ENST00000544177 BICRAQ9NZM4 1560 aa33.33■■■□□ 2.93
JPH4-203ENST00000544177 SCRIBQ14160 1630 aa33.02■■■□□ 2.88
JPH4-203ENST00000544177 SHROOM4Q9ULL8 1493 aa32.93■■■□□ 2.86
JPH4-203ENST00000544177 EIF4G1Q04637 1599 aaKnown RBP32.47■■■□□ 2.79
JPH4-203ENST00000544177 CC2D2AQ9P2K1 1620 aa32.45■■■□□ 2.79
JPH4-203ENST00000544177 CECR2Q9BXF3 1484 aa32.33■■■□□ 2.77
JPH4-203ENST00000544177 NCAPD3P42695 1498 aa31.59■■■□□ 2.65
JPH4-203ENST00000544177 SMARCA4P51532 1647 aa31.55■■■□□ 2.64
JPH4-203ENST00000544177 ATAD2BQ9ULI0 1458 aa31.53■■■□□ 2.64
JPH4-203ENST00000544177 BAZ1AQ9NRL2 1556 aaPredicted RBP31.46■■■□□ 2.63
JPH4-203ENST00000544177 SMARCA2P51531 1590 aa31.44■■■□□ 2.62
JPH4-203ENST00000544177 HMGXB3Q12766 1538 aa31.35■■■□□ 2.61
JPH4-203ENST00000544177 PEG3Q9GZU2 1588 aa31.27■■■□□ 2.6
JPH4-203ENST00000544177 MROH2BQ7Z745 1585 aa31.26■■■□□ 2.6
JPH4-203ENST00000544177 BAZ1BQ9UIG0 1483 aaKnown RBP31.22■■■□□ 2.59
JPH4-203ENST00000544177 DNAJC5Q9H3Z4 198 aa31.02■■■□□ 2.56
JPH4-203ENST00000544177 ERCC6Q03468 1493 aa30.97■■■□□ 2.55
JPH4-203ENST00000544177 NESP48681 1621 aa30.95■■■□□ 2.54
JPH4-203ENST00000544177 WIZO95785 1651 aa30.88■■■□□ 2.53
JPH4-203ENST00000544177 CUX2O14529 1486 aa30.82■■■□□ 2.52
JPH4-203ENST00000544177 LAMC3Q9Y6N6 1575 aa30.79■■■□□ 2.52
JPH4-203ENST00000544177 RSF1Q96T23 1441 aaPredicted RBP30.77■■■□□ 2.52
JPH4-203ENST00000544177 CADPSQ9ULU8 1353 aa30.66■■■□□ 2.5
JPH4-203ENST00000544177 PDS5BQ9NTI5 1447 aa30.63■■■□□ 2.49
JPH4-203ENST00000544177 THOC2Q8NI27 1593 aaKnown RBP30.54■■■□□ 2.48
JPH4-203ENST00000544177 TOP2AP11388 1531 aaKnown RBP30.53■■■□□ 2.48
JPH4-203ENST00000544177 KIF21AQ7Z4S6 1674 aa30.52■■■□□ 2.48
JPH4-203ENST00000544177 SUPT5HO00267 1087 aaKnown RBP30.42■■■□□ 2.46
JPH4-203ENST00000544177 CFTRP13569 1480 aa30.37■■■□□ 2.45
JPH4-203ENST00000544177 MRC2Q9UBG0 1479 aa30.31■■■□□ 2.44
JPH4-203ENST00000544177 FANCD2Q9BXW9 1451 aa30.27■■■□□ 2.44
JPH4-203ENST00000544177 CEP164Q9UPV0 1460 aa30.26■■■□□ 2.44
JPH4-203ENST00000544177 WDR62O43379 1518 aa30.23■■■□□ 2.43
JPH4-203ENST00000544177 CCDC88BA6NC98 1476 aa30.21■■■□□ 2.43
JPH4-203ENST00000544177 URB2Q14146 1524 aaKnown RBP30.01■■■□□ 2.39
JPH4-203ENST00000544177 PRDM2Q13029 1718 aa30■■■□□ 2.39
JPH4-203ENST00000544177 TOPBP1Q92547 1522 aa29.74■■■□□ 2.35
JPH4-203ENST00000544177 ABCC8Q09428 1581 aa29.72■■■□□ 2.35
JPH4-203ENST00000544177 IFT140Q96RY7 1462 aa29.67■■■□□ 2.34
JPH4-203ENST00000544177 DNMBPQ6XZF7 1577 aa29.64■■■□□ 2.34
JPH4-203ENST00000544177 ZNF608Q9ULD9 1512 aaPredicted RBP29.58■■■□□ 2.33
JPH4-203ENST00000544177 OSCARQ8IYS5 282 aa29.51■■■□□ 2.31
JPH4-203ENST00000544177 POLA1P09884 1462 aaPredicted RBP29.46■■■□□ 2.31
JPH4-203ENST00000544177 TARBP1Q13395 1621 aaKnown RBP29.44■■■□□ 2.3
JPH4-203ENST00000544177 EIF4G3O43432 1585 aaKnown RBP29.39■■■□□ 2.3
JPH4-203ENST00000544177 AQRO60306 1485 aaKnown RBP eCLIP29.37■■■□□ 2.29
JPH4-203ENST00000544177 TRIM41Q8WV44 630 aa29.36■■■□□ 2.29
JPH4-203ENST00000544177 SOGA1O94964 1423 aa29.35■■■□□ 2.29
JPH4-203ENST00000544177 RAD54L2Q9Y4B4 1467 aa29.35■■■□□ 2.29
JPH4-203ENST00000544177 CUX1P39880 1505 aa29.35■■■□□ 2.29
JPH4-203ENST00000544177 FGD5Q6ZNL6 1462 aa29.31■■■□□ 2.28
JPH4-203ENST00000544177 TDRD9Q8NDG6 1382 aaKnown RBP29.25■■■□□ 2.27
JPH4-203ENST00000544177 WDR97A6NE52 1622 aa29.16■■■□□ 2.26
JPH4-203ENST00000544177 FBLN2P98095 1184 aa29.1■■■□□ 2.25
JPH4-203ENST00000544177 CHD1O14646 1710 aa29.09■■■□□ 2.25
JPH4-203ENST00000544177 CHIC1Q5VXU3 224 aa29.09■■■□□ 2.25
JPH4-203ENST00000544177 SNAPC4Q5SXM2 1469 aa29.05■■■□□ 2.24
JPH4-203ENST00000544177 GRIN2BQ13224 1484 aa29.04■■■□□ 2.24
JPH4-203ENST00000544177 ABCA10Q8WWZ4 1543 aa29.02■■■□□ 2.24
JPH4-203ENST00000544177 RIMBP3CA6NJZ7 1639 aa29.02■■■□□ 2.24
JPH4-203ENST00000544177 RIMBP3BA6NNM3 1639 aa29.02■■■□□ 2.24
JPH4-203ENST00000544177 RIMBP3Q9UFD9 1639 aa29.02■■■□□ 2.24
JPH4-203ENST00000544177 WRNQ14191 1432 aaPredicted RBP eCLIP29.01■■■□□ 2.23
JPH4-203ENST00000544177 MAGI1Q96QZ7 1491 aaPredicted RBP29■■■□□ 2.23
JPH4-203ENST00000544177 GAPVD1Q14C86 1478 aa28.98■■■□□ 2.23
JPH4-203ENST00000544177 ARHGEF11O15085 1522 aa28.98■■■□□ 2.23
JPH4-203ENST00000544177 TOP2BQ02880 1626 aa28.97■■■□□ 2.23
JPH4-203ENST00000544177 CHMP7Q8WUX9 453 aaPredicted RBP28.96■■■□□ 2.23
JPH4-203ENST00000544177 BIVM-ERCC5R4GMW8 1640 aa28.95■■■□□ 2.23
JPH4-203ENST00000544177 SYNJ1O43426 1573 aa28.94■■■□□ 2.22
JPH4-203ENST00000544177 ABCA5Q8WWZ7 1642 aa28.91■■■□□ 2.22
JPH4-203ENST00000544177 SYNJ2O15056 1496 aa28.91■■■□□ 2.22
JPH4-203ENST00000544177 PBRM1Q86U86 1689 aa28.89■■■□□ 2.21
JPH4-203ENST00000544177 CLASP1Q7Z460 1538 aa28.81■■■□□ 2.2
JPH4-203ENST00000544177 CYB5RLQ6IPT4 315 aa28.79■■■□□ 2.2
JPH4-203ENST00000544177 ARAP1Q96P48 1450 aa28.72■■■□□ 2.19
JPH4-203ENST00000544177 GRIN2AQ12879 1464 aa28.66■■■□□ 2.18
JPH4-203ENST00000544177 ADAMTS12P58397 1594 aa28.66■■■□□ 2.18
JPH4-203ENST00000544177 ERICH3Q5RHP9 1530 aa28.65■■■□□ 2.18
JPH4-203ENST00000544177 FHAD1B1AJZ9 1412 aa28.64■■■□□ 2.18
JPH4-203ENST00000544177 NUP160Q12769 1436 aa28.57■■■□□ 2.16
JPH4-203ENST00000544177 CEP170Q5SW79 1584 aa28.53■■■□□ 2.16
JPH4-203ENST00000544177 KIF27Q86VH2 1401 aa28.43■■■□□ 2.14
JPH4-203ENST00000544177 IGF1RP08069 1367 aa28.42■■■□□ 2.14
JPH4-203ENST00000544177 ERCC6L2Q5T890 1561 aa28.38■■■□□ 2.13
JPH4-203ENST00000544177 SHROOM2Q13796 1616 aa28.37■■■□□ 2.13
JPH4-203ENST00000544177 TRHP20396 242 aaPredicted RBP28.33■■■□□ 2.13
JPH4-203ENST00000544177 JPH4Q96JJ6 628 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms