RNA–Protein interactions for RNA: ENST00000543930.5

KIFC3-207, Transcript of kinesin family member C3, humanhuman

TSL 2 BASIC

Gene KIFC3, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-207ENST00000543930 NISCHQ9Y2I1 1504 aa28.5■■■□□ 2.15
KIFC3-207ENST00000543930 DCAF8L2P0C7V8 631 aa25.02■■□□□ 1.6
KIFC3-207ENST00000543930 HRCP23327 699 aa24.98■■□□□ 1.59
KIFC3-207ENST00000543930 SHROOM4Q9ULL8 1493 aa24.68■■□□□ 1.54
KIFC3-207ENST00000543930 PELP1Q8IZL8 1130 aaKnown RBP24.55■■□□□ 1.52
KIFC3-207ENST00000543930 PPARGC1BQ86YN6 1023 aaKnown RBP24.46■■□□□ 1.51
KIFC3-207ENST00000543930 PCGF6Q9BYE7 350 aa24.32■■□□□ 1.48
KIFC3-207ENST00000543930 CCDC180Q9P1Z9 1646 aa24.15■■□□□ 1.46
KIFC3-207ENST00000543930 ABCC9O60706 1549 aa24.06■■□□□ 1.44
KIFC3-207ENST00000543930 SUPT5HO00267 1087 aaKnown RBP24.06■■□□□ 1.44
KIFC3-207ENST00000543930 MYO15BQ96JP2 1530 aa23.99■■□□□ 1.43
KIFC3-207ENST00000543930 ZCCHC6Q5VYS8 1495 aaKnown RBP23.85■■□□□ 1.41
KIFC3-207ENST00000543930 SCAF1Q9H7N4 1312 aaKnown RBP23.81■■□□□ 1.4
KIFC3-207ENST00000543930 CHIC1Q5VXU3 224 aa23.79■■□□□ 1.4
KIFC3-207ENST00000543930 MYT1Q01538 1121 aa23.68■■□□□ 1.38
KIFC3-207ENST00000543930 DCAF1Q9Y4B6 1507 aa23.56■■□□□ 1.36
KIFC3-207ENST00000543930 TRIM26Q12899 539 aaPredicted RBP23.44■■□□□ 1.34
KIFC3-207ENST00000543930 ZEB1P37275 1124 aaPredicted RBP23.35■■□□□ 1.33
KIFC3-207ENST00000543930 LOC105371045A0A1W2PR82 267 aa23.29■■□□□ 1.32
KIFC3-207ENST00000543930 SCRIBQ14160 1630 aa23.24■■□□□ 1.31
KIFC3-207ENST00000543930 PABPN1Q86U42 306 aaKnown RBP eCLIP23.15■■□□□ 1.3
KIFC3-207ENST00000543930 ACIN1Q9UKV3 1341 aaKnown RBP23.13■■□□□ 1.29
KIFC3-207ENST00000543930 NEUROD1Q13562 356 aa23.06■■□□□ 1.28
KIFC3-207ENST00000543930 GTF3C3Q9Y5Q9 886 aa22.97■■□□□ 1.27
KIFC3-207ENST00000543930 CENPBP07199 599 aaPredicted RBP22.78■■□□□ 1.24
KIFC3-207ENST00000543930 NACADO15069 1562 aa22.72■■□□□ 1.23
KIFC3-207ENST00000543930 CECR2Q9BXF3 1484 aa22.68■■□□□ 1.22
KIFC3-207ENST00000543930 RB1CC1Q8TDY2 1594 aa22.64■■□□□ 1.22
KIFC3-207ENST00000543930 DIEXFQ68CQ4 756 aaKnown RBP22.57■■□□□ 1.2
KIFC3-207ENST00000543930 RSF1Q96T23 1441 aaPredicted RBP22.43■■□□□ 1.18
KIFC3-207ENST00000543930 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.43■■□□□ 1.18
KIFC3-207ENST00000543930 EHMT2Q96KQ7 1210 aa22.41■■□□□ 1.18
KIFC3-207ENST00000543930 CCER1Q8TC90 406 aaPredicted RBP22.39■■□□□ 1.18
KIFC3-207ENST00000543930 MROH2BQ7Z745 1585 aa22.35■■□□□ 1.17
KIFC3-207ENST00000543930 UNC13AQ9UPW8 1703 aa22.3■■□□□ 1.16
KIFC3-207ENST00000543930 TTBK1Q5TCY1 1321 aaPredicted RBP22.28■■□□□ 1.16
KIFC3-207ENST00000543930 FAM9AQ8IZU1 332 aaPredicted RBP22.25■■□□□ 1.15
KIFC3-207ENST00000543930 YTHDC1Q96MU7 727 aaKnown RBP22.25■■□□□ 1.15
KIFC3-207ENST00000543930 TRIM41Q8WV44 630 aa22.2■■□□□ 1.15
KIFC3-207ENST00000543930 BICRAQ9NZM4 1560 aa22.17■■□□□ 1.14
KIFC3-207ENST00000543930 WIZO95785 1651 aa22.17■■□□□ 1.14
KIFC3-207ENST00000543930 BCL11AQ9H165 835 aa22.15■■□□□ 1.14
KIFC3-207ENST00000543930 ZNF316A6NFI3 1004 aaPredicted RBP22.05■■□□□ 1.12
KIFC3-207ENST00000543930 ANP32EQ9BTT0 268 aa21.97■■□□□ 1.11
KIFC3-207ENST00000543930 MIER1Q8N108 512 aa21.96■■□□□ 1.11
KIFC3-207ENST00000543930 BAZ1AQ9NRL2 1556 aaPredicted RBP21.86■■□□□ 1.09
KIFC3-207ENST00000543930 SMARCA4P51532 1647 aa21.83■■□□□ 1.09
KIFC3-207ENST00000543930 DNAJC5BQ9UF47 199 aa21.81■■□□□ 1.08
KIFC3-207ENST00000543930 SUPT16HQ9Y5B9 1047 aaKnown RBP21.78■■□□□ 1.08
KIFC3-207ENST00000543930 TSHZ2Q9NRE2 1034 aa21.77■■□□□ 1.08
KIFC3-207ENST00000543930 CSRNP3Q8WYN3 585 aa21.75■■□□□ 1.07
KIFC3-207ENST00000543930 CCDC88BA6NC98 1476 aa21.7■■□□□ 1.06
KIFC3-207ENST00000543930 CLSPNQ9HAW4 1339 aa21.69■■□□□ 1.06
KIFC3-207ENST00000543930 ATAD2BQ9ULI0 1458 aa21.62■■□□□ 1.05
KIFC3-207ENST00000543930 ABCC8Q09428 1581 aa21.57■■□□□ 1.04
KIFC3-207ENST00000543930 BAZ1BQ9UIG0 1483 aaKnown RBP21.55■■□□□ 1.04
KIFC3-207ENST00000543930 EIF4G1Q04637 1599 aaKnown RBP21.54■■□□□ 1.04
KIFC3-207ENST00000543930 TOP2AP11388 1531 aaKnown RBP21.51■■□□□ 1.03
KIFC3-207ENST00000543930 WRNQ14191 1432 aaPredicted RBP eCLIP21.48■■□□□ 1.03
KIFC3-207ENST00000543930 SMARCA2P51531 1590 aa21.48■■□□□ 1.03
KIFC3-207ENST00000543930 RANGAP1P46060 587 aaPredicted RBP21.47■■□□□ 1.03
KIFC3-207ENST00000543930 PRKCSHP14314 528 aaPredicted RBP21.43■■□□□ 1.02
KIFC3-207ENST00000543930 CEP162Q5TB80 1403 aa21.31■■□□□ 1
KIFC3-207ENST00000543930 CC2D2AQ9P2K1 1620 aa21.3■■□□□ 1
KIFC3-207ENST00000543930 HNRNPUL2Q1KMD3 747 aaKnown RBP21.3■■□□□ 1
KIFC3-207ENST00000543930 BCANQ96GW7 911 aa21.27■■□□□ 1
KIFC3-207ENST00000543930 RUSC2Q8N2Y8 1516 aa21.25■□□□□ 0.99
KIFC3-207ENST00000543930 SOGA1O94964 1423 aa21.25■□□□□ 0.99
KIFC3-207ENST00000543930 RBM19Q9Y4C8 960 aaKnown RBP21.23■□□□□ 0.99
KIFC3-207ENST00000543930 NCAPD3P42695 1498 aa21.18■□□□□ 0.98
KIFC3-207ENST00000543930 NESP48681 1621 aa21.16■□□□□ 0.98
KIFC3-207ENST00000543930 PEG3Q9GZU2 1588 aa21.15■□□□□ 0.98
KIFC3-207ENST00000543930 FKBP8Q14318 412 aa21.14■□□□□ 0.97
KIFC3-207ENST00000543930 TNIKQ9UKE5 1360 aa21.14■□□□□ 0.97
KIFC3-207ENST00000543930 UBTFP17480 764 aaKnown RBP21.12■□□□□ 0.97
KIFC3-207ENST00000543930 MSH5O43196 834 aa21.08■□□□□ 0.96
KIFC3-207ENST00000543930 KCNH8Q96L42 1107 aa21.05■□□□□ 0.96
KIFC3-207ENST00000543930 SYNJ1O43426 1573 aa20.99■□□□□ 0.95
KIFC3-207ENST00000543930 ERICH6Q7L0X2 663 aa20.96■□□□□ 0.95
KIFC3-207ENST00000543930 ITGAEP38570 1179 aa20.96■□□□□ 0.95
KIFC3-207ENST00000543930 NEFLP07196 543 aa20.93■□□□□ 0.94
KIFC3-207ENST00000543930 HMGXB3Q12766 1538 aa20.93■□□□□ 0.94
KIFC3-207ENST00000543930 CADPSQ9ULU8 1353 aa20.92■□□□□ 0.94
KIFC3-207ENST00000543930 DHX57Q6P158 1386 aaKnown RBP20.88■□□□□ 0.93
KIFC3-207ENST00000543930 FANCIQ9NVI1 1328 aa20.85■□□□□ 0.93
KIFC3-207ENST00000543930 CFTRP13569 1480 aa20.84■□□□□ 0.93
KIFC3-207ENST00000543930 GOLGA3Q08378 1498 aa20.79■□□□□ 0.92
KIFC3-207ENST00000543930 DEKP35659 375 aaKnown RBP20.79■□□□□ 0.92
KIFC3-207ENST00000543930 CUX1P39880 1505 aa20.79■□□□□ 0.92
KIFC3-207ENST00000543930 MYT1LQ9UL68 1186 aa20.78■□□□□ 0.92
KIFC3-207ENST00000543930 EEA1Q15075 1411 aa20.78■□□□□ 0.92
KIFC3-207ENST00000543930 APLP2Q06481 763 aa20.77■□□□□ 0.91
KIFC3-207ENST00000543930 ANO8Q9HCE9 1232 aaPredicted RBP20.76■□□□□ 0.91
KIFC3-207ENST00000543930 FANCD2Q9BXW9 1451 aa20.75■□□□□ 0.91
KIFC3-207ENST00000543930 RAD54L2Q9Y4B4 1467 aa20.73■□□□□ 0.91
KIFC3-207ENST00000543930 P3H3Q8IVL6 736 aa20.72■□□□□ 0.91
KIFC3-207ENST00000543930 TRIM52Q96A61 297 aa20.7■□□□□ 0.9
KIFC3-207ENST00000543930 CLIP1P30622 1438 aa20.69■□□□□ 0.9
KIFC3-207ENST00000543930 VPS8Q8N3P4 1428 aa20.68■□□□□ 0.9
KIFC3-207ENST00000543930 CDK11AQ9UQ88 783 aaPredicted RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms