RNA–Protein interactions for RNA: ENST00000543540.5

CADM1-216, Transcript of cell adhesion molecule 1, humanhuman

TSL 3

Gene CADM1, Length 629 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-216ENST00000543540 NISCHQ9Y2I1 1504 aa28.59■■■□□ 2.17
CADM1-216ENST00000543540 CCDC180Q9P1Z9 1646 aa25.62■■□□□ 1.69
CADM1-216ENST00000543540 ABCC9O60706 1549 aa25.52■■□□□ 1.68
CADM1-216ENST00000543540 RB1CC1Q8TDY2 1594 aa24.36■■□□□ 1.49
CADM1-216ENST00000543540 NACADO15069 1562 aa24.24■■□□□ 1.47
CADM1-216ENST00000543540 DCAF8L2P0C7V8 631 aa23.99■■□□□ 1.43
CADM1-216ENST00000543540 MYO15BQ96JP2 1530 aa23.99■■□□□ 1.43
CADM1-216ENST00000543540 DNAJC5BQ9UF47 199 aa23.91■■□□□ 1.42
CADM1-216ENST00000543540 PABPN1Q86U42 306 aaKnown RBP eCLIP23.76■■□□□ 1.39
CADM1-216ENST00000543540 ZCCHC6Q5VYS8 1495 aaKnown RBP23.72■■□□□ 1.39
CADM1-216ENST00000543540 UNC13AQ9UPW8 1703 aa23.7■■□□□ 1.39
CADM1-216ENST00000543540 DCAF1Q9Y4B6 1507 aa23.69■■□□□ 1.38
CADM1-216ENST00000543540 BICRAQ9NZM4 1560 aa23.65■■□□□ 1.38
CADM1-216ENST00000543540 SHROOM4Q9ULL8 1493 aa23.43■■□□□ 1.34
CADM1-216ENST00000543540 SCRIBQ14160 1630 aa23.29■■□□□ 1.32
CADM1-216ENST00000543540 CC2D2AQ9P2K1 1620 aa23.06■■□□□ 1.28
CADM1-216ENST00000543540 EIF4G1Q04637 1599 aaKnown RBP23.06■■□□□ 1.28
CADM1-216ENST00000543540 CECR2Q9BXF3 1484 aa23.02■■□□□ 1.28
CADM1-216ENST00000543540 NCAPD3P42695 1498 aa22.4■■□□□ 1.18
CADM1-216ENST00000543540 ATAD2BQ9ULI0 1458 aa22.3■■□□□ 1.16
CADM1-216ENST00000543540 SMARCA4P51532 1647 aa22.26■■□□□ 1.15
CADM1-216ENST00000543540 SMARCA2P51531 1590 aa22.25■■□□□ 1.15
CADM1-216ENST00000543540 HMGXB3Q12766 1538 aa22.22■■□□□ 1.15
CADM1-216ENST00000543540 BAZ1AQ9NRL2 1556 aaPredicted RBP22.19■■□□□ 1.14
CADM1-216ENST00000543540 PEG3Q9GZU2 1588 aa22.11■■□□□ 1.13
CADM1-216ENST00000543540 BAZ1BQ9UIG0 1483 aaKnown RBP22.07■■□□□ 1.12
CADM1-216ENST00000543540 CUX2O14529 1486 aa22.04■■□□□ 1.12
CADM1-216ENST00000543540 ERCC6Q03468 1493 aa22.04■■□□□ 1.12
CADM1-216ENST00000543540 DNAJC5Q9H3Z4 198 aa22.03■■□□□ 1.12
CADM1-216ENST00000543540 MROH2BQ7Z745 1585 aa22■■□□□ 1.11
CADM1-216ENST00000543540 NESP48681 1621 aa21.94■■□□□ 1.1
CADM1-216ENST00000543540 LAMC3Q9Y6N6 1575 aa21.84■■□□□ 1.09
CADM1-216ENST00000543540 PDS5BQ9NTI5 1447 aa21.73■■□□□ 1.07
CADM1-216ENST00000543540 THOC2Q8NI27 1593 aaKnown RBP21.73■■□□□ 1.07
CADM1-216ENST00000543540 CADPSQ9ULU8 1353 aa21.7■■□□□ 1.06
CADM1-216ENST00000543540 WIZO95785 1651 aa21.69■■□□□ 1.06
CADM1-216ENST00000543540 KIF21AQ7Z4S6 1674 aa21.62■■□□□ 1.05
CADM1-216ENST00000543540 RSF1Q96T23 1441 aaPredicted RBP21.6■■□□□ 1.05
CADM1-216ENST00000543540 MRC2Q9UBG0 1479 aa21.52■■□□□ 1.04
CADM1-216ENST00000543540 TOP2AP11388 1531 aaKnown RBP21.5■■□□□ 1.03
CADM1-216ENST00000543540 WDR62O43379 1518 aa21.48■■□□□ 1.03
CADM1-216ENST00000543540 CFTRP13569 1480 aa21.47■■□□□ 1.03
CADM1-216ENST00000543540 CEP164Q9UPV0 1460 aa21.44■■□□□ 1.02
CADM1-216ENST00000543540 FANCD2Q9BXW9 1451 aa21.42■■□□□ 1.02
CADM1-216ENST00000543540 URB2Q14146 1524 aaKnown RBP21.24■□□□□ 0.99
CADM1-216ENST00000543540 CCDC88BA6NC98 1476 aa21.24■□□□□ 0.99
CADM1-216ENST00000543540 PRDM2Q13029 1718 aa21.15■□□□□ 0.98
CADM1-216ENST00000543540 IFT140Q96RY7 1462 aa21.04■□□□□ 0.96
CADM1-216ENST00000543540 ABCC8Q09428 1581 aa21.02■□□□□ 0.96
CADM1-216ENST00000543540 OSCARQ8IYS5 282 aa21.02■□□□□ 0.96
CADM1-216ENST00000543540 TOPBP1Q92547 1522 aa21.02■□□□□ 0.96
CADM1-216ENST00000543540 ZNF608Q9ULD9 1512 aaPredicted RBP20.95■□□□□ 0.94
CADM1-216ENST00000543540 DNMBPQ6XZF7 1577 aa20.95■□□□□ 0.94
CADM1-216ENST00000543540 TRIM41Q8WV44 630 aa20.91■□□□□ 0.94
CADM1-216ENST00000543540 TARBP1Q13395 1621 aaKnown RBP20.83■□□□□ 0.93
CADM1-216ENST00000543540 EIF4G3O43432 1585 aaKnown RBP20.83■□□□□ 0.92
CADM1-216ENST00000543540 POLA1P09884 1462 aaPredicted RBP20.81■□□□□ 0.92
CADM1-216ENST00000543540 AQRO60306 1485 aaKnown RBP eCLIP20.77■□□□□ 0.92
CADM1-216ENST00000543540 SOGA1O94964 1423 aa20.71■□□□□ 0.91
CADM1-216ENST00000543540 RAD54L2Q9Y4B4 1467 aa20.7■□□□□ 0.9
CADM1-216ENST00000543540 RIMBP3CA6NJZ7 1639 aa20.69■□□□□ 0.9
CADM1-216ENST00000543540 RIMBP3BA6NNM3 1639 aa20.69■□□□□ 0.9
CADM1-216ENST00000543540 RIMBP3Q9UFD9 1639 aa20.69■□□□□ 0.9
CADM1-216ENST00000543540 FGD5Q6ZNL6 1462 aa20.68■□□□□ 0.9
CADM1-216ENST00000543540 CUX1P39880 1505 aa20.68■□□□□ 0.9
CADM1-216ENST00000543540 WDR97A6NE52 1622 aa20.67■□□□□ 0.9
CADM1-216ENST00000543540 ARHGEF11O15085 1522 aa20.67■□□□□ 0.9
CADM1-216ENST00000543540 TDRD9Q8NDG6 1382 aaKnown RBP20.65■□□□□ 0.9
CADM1-216ENST00000543540 CHD1O14646 1710 aa20.61■□□□□ 0.89
CADM1-216ENST00000543540 SUPT5HO00267 1087 aaKnown RBP20.58■□□□□ 0.89
CADM1-216ENST00000543540 FBLN2P98095 1184 aa20.57■□□□□ 0.88
CADM1-216ENST00000543540 SNAPC4Q5SXM2 1469 aa20.56■□□□□ 0.88
CADM1-216ENST00000543540 MAGI1Q96QZ7 1491 aaPredicted RBP20.56■□□□□ 0.88
CADM1-216ENST00000543540 GRIN2BQ13224 1484 aa20.55■□□□□ 0.88
CADM1-216ENST00000543540 ABCA10Q8WWZ4 1543 aa20.48■□□□□ 0.87
CADM1-216ENST00000543540 CYB5RLQ6IPT4 315 aa20.48■□□□□ 0.87
CADM1-216ENST00000543540 CHMP7Q8WUX9 453 aaPredicted RBP20.48■□□□□ 0.87
CADM1-216ENST00000543540 SYNJ2O15056 1496 aa20.48■□□□□ 0.87
CADM1-216ENST00000543540 CLASP1Q7Z460 1538 aa20.48■□□□□ 0.87
CADM1-216ENST00000543540 GAPVD1Q14C86 1478 aa20.47■□□□□ 0.87
CADM1-216ENST00000543540 ARAP1Q96P48 1450 aa20.47■□□□□ 0.87
CADM1-216ENST00000543540 SYNJ1O43426 1573 aa20.44■□□□□ 0.86
CADM1-216ENST00000543540 ABCA5Q8WWZ7 1642 aa20.42■□□□□ 0.86
CADM1-216ENST00000543540 WRNQ14191 1432 aaPredicted RBP eCLIP20.41■□□□□ 0.86
CADM1-216ENST00000543540 PBRM1Q86U86 1689 aa20.38■□□□□ 0.85
CADM1-216ENST00000543540 TOP2BQ02880 1626 aa20.37■□□□□ 0.85
CADM1-216ENST00000543540 BIVM-ERCC5R4GMW8 1640 aa20.35■□□□□ 0.85
CADM1-216ENST00000543540 GRIN2AQ12879 1464 aa20.27■□□□□ 0.84
CADM1-216ENST00000543540 ADAMTS12P58397 1594 aa20.26■□□□□ 0.83
CADM1-216ENST00000543540 FHAD1B1AJZ9 1412 aa20.24■□□□□ 0.83
CADM1-216ENST00000543540 NUP160Q12769 1436 aa20.24■□□□□ 0.83
CADM1-216ENST00000543540 ERICH3Q5RHP9 1530 aa20.22■□□□□ 0.83
CADM1-216ENST00000543540 TRHP20396 242 aaPredicted RBP20.2■□□□□ 0.82
CADM1-216ENST00000543540 CEP170Q5SW79 1584 aa20.17■□□□□ 0.82
CADM1-216ENST00000543540 SHROOM2Q13796 1616 aa20.12■□□□□ 0.81
CADM1-216ENST00000543540 ERCC6L2Q5T890 1561 aa20.1■□□□□ 0.81
CADM1-216ENST00000543540 PRG4Q92954 1404 aaPredicted RBP20■□□□□ 0.79
CADM1-216ENST00000543540 JPH4Q96JJ6 628 aa19.99■□□□□ 0.79
CADM1-216ENST00000543540 KIF27Q86VH2 1401 aa19.99■□□□□ 0.79
CADM1-216ENST00000543540 IGF1RP08069 1367 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms