RNA–Protein interactions for RNA: ENST00000543530.1

ARHGEF17-205, Transcript of Rho guanine nucleotide exchange factor 17, humanhuman

TSL 2

Gene ARHGEF17, Length 970 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF17-205ENST00000543530 NISCHQ9Y2I1 1504 aa33.39■■■□□ 2.94
ARHGEF17-205ENST00000543530 ABCC9O60706 1549 aa30.76■■■□□ 2.51
ARHGEF17-205ENST00000543530 CCDC180Q9P1Z9 1646 aa30.19■■■□□ 2.42
ARHGEF17-205ENST00000543530 DNAJC5BQ9UF47 199 aa29.46■■■□□ 2.31
ARHGEF17-205ENST00000543530 RB1CC1Q8TDY2 1594 aa28.96■■■□□ 2.23
ARHGEF17-205ENST00000543530 NACADO15069 1562 aa28.62■■■□□ 2.17
ARHGEF17-205ENST00000543530 PABPN1Q86U42 306 aaKnown RBP eCLIP28.55■■■□□ 2.16
ARHGEF17-205ENST00000543530 UNC13AQ9UPW8 1703 aa28.55■■■□□ 2.16
ARHGEF17-205ENST00000543530 DCAF8L2P0C7V8 631 aa28.33■■■□□ 2.13
ARHGEF17-205ENST00000543530 BICRAQ9NZM4 1560 aa28.31■■■□□ 2.12
ARHGEF17-205ENST00000543530 MYO15BQ96JP2 1530 aa28.02■■■□□ 2.08
ARHGEF17-205ENST00000543530 CC2D2AQ9P2K1 1620 aa27.78■■■□□ 2.04
ARHGEF17-205ENST00000543530 CECR2Q9BXF3 1484 aa27.71■■■□□ 2.03
ARHGEF17-205ENST00000543530 SHROOM4Q9ULL8 1493 aa27.61■■■□□ 2.01
ARHGEF17-205ENST00000543530 EIF4G1Q04637 1599 aaKnown RBP27.56■■■□□ 2
ARHGEF17-205ENST00000543530 ZCCHC6Q5VYS8 1495 aaKnown RBP27.55■■■□□ 2
ARHGEF17-205ENST00000543530 SCRIBQ14160 1630 aa27.52■■■□□ 2
ARHGEF17-205ENST00000543530 DCAF1Q9Y4B6 1507 aa27.49■■□□□ 1.99
ARHGEF17-205ENST00000543530 DNAJC5Q9H3Z4 198 aa27.31■■□□□ 1.96
ARHGEF17-205ENST00000543530 CUX2O14529 1486 aa26.63■■□□□ 1.85
ARHGEF17-205ENST00000543530 ERCC6Q03468 1493 aa26.47■■□□□ 1.83
ARHGEF17-205ENST00000543530 NCAPD3P42695 1498 aa26.46■■□□□ 1.83
ARHGEF17-205ENST00000543530 NESP48681 1621 aa26.33■■□□□ 1.81
ARHGEF17-205ENST00000543530 ATAD2BQ9ULI0 1458 aa26.33■■□□□ 1.81
ARHGEF17-205ENST00000543530 HMGXB3Q12766 1538 aa26.19■■□□□ 1.78
ARHGEF17-205ENST00000543530 SMARCA4P51532 1647 aa26.19■■□□□ 1.78
ARHGEF17-205ENST00000543530 THOC2Q8NI27 1593 aaKnown RBP26.16■■□□□ 1.78
ARHGEF17-205ENST00000543530 SMARCA2P51531 1590 aa26.14■■□□□ 1.78
ARHGEF17-205ENST00000543530 KIF21AQ7Z4S6 1674 aa25.99■■□□□ 1.75
ARHGEF17-205ENST00000543530 BAZ1BQ9UIG0 1483 aaKnown RBP25.98■■□□□ 1.75
ARHGEF17-205ENST00000543530 LAMC3Q9Y6N6 1575 aa25.93■■□□□ 1.74
ARHGEF17-205ENST00000543530 PEG3Q9GZU2 1588 aa25.91■■□□□ 1.74
ARHGEF17-205ENST00000543530 BAZ1AQ9NRL2 1556 aaPredicted RBP25.89■■□□□ 1.73
ARHGEF17-205ENST00000543530 TRIM41Q8WV44 630 aa25.86■■□□□ 1.73
ARHGEF17-205ENST00000543530 MROH2BQ7Z745 1585 aa25.78■■□□□ 1.72
ARHGEF17-205ENST00000543530 PDS5BQ9NTI5 1447 aa25.72■■□□□ 1.71
ARHGEF17-205ENST00000543530 MRC2Q9UBG0 1479 aa25.61■■□□□ 1.69
ARHGEF17-205ENST00000543530 WDR62O43379 1518 aa25.61■■□□□ 1.69
ARHGEF17-205ENST00000543530 CADPSQ9ULU8 1353 aa25.6■■□□□ 1.69
ARHGEF17-205ENST00000543530 WIZO95785 1651 aa25.48■■□□□ 1.67
ARHGEF17-205ENST00000543530 CEP164Q9UPV0 1460 aa25.37■■□□□ 1.65
ARHGEF17-205ENST00000543530 FANCD2Q9BXW9 1451 aa25.33■■□□□ 1.65
ARHGEF17-205ENST00000543530 OSCARQ8IYS5 282 aa25.3■■□□□ 1.64
ARHGEF17-205ENST00000543530 URB2Q14146 1524 aaKnown RBP25.23■■□□□ 1.63
ARHGEF17-205ENST00000543530 CFTRP13569 1480 aa25.22■■□□□ 1.63
ARHGEF17-205ENST00000543530 RIMBP3CA6NJZ7 1639 aa25.19■■□□□ 1.62
ARHGEF17-205ENST00000543530 RIMBP3BA6NNM3 1639 aa25.19■■□□□ 1.62
ARHGEF17-205ENST00000543530 RIMBP3Q9UFD9 1639 aa25.19■■□□□ 1.62
ARHGEF17-205ENST00000543530 ZNF608Q9ULD9 1512 aaPredicted RBP25.02■■□□□ 1.6
ARHGEF17-205ENST00000543530 PRDM2Q13029 1718 aa25.02■■□□□ 1.6
ARHGEF17-205ENST00000543530 TOP2AP11388 1531 aaKnown RBP25.01■■□□□ 1.59
ARHGEF17-205ENST00000543530 RSF1Q96T23 1441 aaPredicted RBP25■■□□□ 1.59
ARHGEF17-205ENST00000543530 ARHGEF11O15085 1522 aa25■■□□□ 1.59
ARHGEF17-205ENST00000543530 IFT140Q96RY7 1462 aa24.88■■□□□ 1.57
ARHGEF17-205ENST00000543530 EIF4G3O43432 1585 aaKnown RBP24.83■■□□□ 1.57
ARHGEF17-205ENST00000543530 TOPBP1Q92547 1522 aa24.82■■□□□ 1.56
ARHGEF17-205ENST00000543530 CHD1O14646 1710 aa24.82■■□□□ 1.56
ARHGEF17-205ENST00000543530 CYB5RLQ6IPT4 315 aa24.8■■□□□ 1.56
ARHGEF17-205ENST00000543530 CCDC88BA6NC98 1476 aa24.77■■□□□ 1.56
ARHGEF17-205ENST00000543530 ARAP1Q96P48 1450 aa24.75■■□□□ 1.55
ARHGEF17-205ENST00000543530 TARBP1Q13395 1621 aaKnown RBP24.71■■□□□ 1.55
ARHGEF17-205ENST00000543530 AQRO60306 1485 aaKnown RBP eCLIP24.7■■□□□ 1.54
ARHGEF17-205ENST00000543530 DNMBPQ6XZF7 1577 aa24.67■■□□□ 1.54
ARHGEF17-205ENST00000543530 TRHP20396 242 aaPredicted RBP24.64■■□□□ 1.54
ARHGEF17-205ENST00000543530 ABCC8Q09428 1581 aa24.6■■□□□ 1.53
ARHGEF17-205ENST00000543530 POLA1P09884 1462 aaPredicted RBP24.53■■□□□ 1.52
ARHGEF17-205ENST00000543530 FBLN2P98095 1184 aa24.53■■□□□ 1.52
ARHGEF17-205ENST00000543530 RAD54L2Q9Y4B4 1467 aa24.5■■□□□ 1.51
ARHGEF17-205ENST00000543530 CLASP1Q7Z460 1538 aa24.46■■□□□ 1.51
ARHGEF17-205ENST00000543530 TDRD9Q8NDG6 1382 aaKnown RBP24.43■■□□□ 1.5
ARHGEF17-205ENST00000543530 SNAPC4Q5SXM2 1469 aa24.39■■□□□ 1.5
ARHGEF17-205ENST00000543530 SOGA1O94964 1423 aa24.36■■□□□ 1.49
ARHGEF17-205ENST00000543530 FGD5Q6ZNL6 1462 aa24.3■■□□□ 1.48
ARHGEF17-205ENST00000543530 SYNJ1O43426 1573 aa24.29■■□□□ 1.48
ARHGEF17-205ENST00000543530 WDR97A6NE52 1622 aa24.26■■□□□ 1.47
ARHGEF17-205ENST00000543530 AEBP2Q6ZN18 517 aaPredicted RBP24.26■■□□□ 1.47
ARHGEF17-205ENST00000543530 MAGI1Q96QZ7 1491 aaPredicted RBP24.24■■□□□ 1.47
ARHGEF17-205ENST00000543530 CUX1P39880 1505 aa24.24■■□□□ 1.47
ARHGEF17-205ENST00000543530 CHMP7Q8WUX9 453 aaPredicted RBP24.23■■□□□ 1.47
ARHGEF17-205ENST00000543530 GRIN2BQ13224 1484 aa24.19■■□□□ 1.46
ARHGEF17-205ENST00000543530 PBRM1Q86U86 1689 aa24.19■■□□□ 1.46
ARHGEF17-205ENST00000543530 SYNJ2O15056 1496 aa24.19■■□□□ 1.46
ARHGEF17-205ENST00000543530 GAPVD1Q14C86 1478 aa24.17■■□□□ 1.46
ARHGEF17-205ENST00000543530 ERCC6L2Q5T890 1561 aa24.14■■□□□ 1.45
ARHGEF17-205ENST00000543530 ABCA5Q8WWZ7 1642 aa24.05■■□□□ 1.44
ARHGEF17-205ENST00000543530 ABCA10Q8WWZ4 1543 aa23.97■■□□□ 1.43
ARHGEF17-205ENST00000543530 KIF13AQ9H1H9 1805 aa23.96■■□□□ 1.43
ARHGEF17-205ENST00000543530 CEP170Q5SW79 1584 aa23.95■■□□□ 1.42
ARHGEF17-205ENST00000543530 GRIN2AQ12879 1464 aa23.93■■□□□ 1.42
ARHGEF17-205ENST00000543530 SHROOM2Q13796 1616 aa23.89■■□□□ 1.42
ARHGEF17-205ENST00000543530 ADAMTS12P58397 1594 aa23.88■■□□□ 1.41
ARHGEF17-205ENST00000543530 NUP160Q12769 1436 aa23.88■■□□□ 1.41
ARHGEF17-205ENST00000543530 BIVM-ERCC5R4GMW8 1640 aa23.7■■□□□ 1.39
ARHGEF17-205ENST00000543530 FHAD1B1AJZ9 1412 aa23.7■■□□□ 1.38
ARHGEF17-205ENST00000543530 WRNQ14191 1432 aaPredicted RBP eCLIP23.68■■□□□ 1.38
ARHGEF17-205ENST00000543530 PRG4Q92954 1404 aaPredicted RBP23.67■■□□□ 1.38
ARHGEF17-205ENST00000543530 TOP2BQ02880 1626 aa23.66■■□□□ 1.38
ARHGEF17-205ENST00000543530 ERICH3Q5RHP9 1530 aa23.63■■□□□ 1.37
ARHGEF17-205ENST00000543530 ABCC10Q5T3U5 1492 aa23.61■■□□□ 1.37
ARHGEF17-205ENST00000543530 JPH4Q96JJ6 628 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms