RNA–Protein interactions for RNA: ENST00000543210.6

ABR-204, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2 BASIC

Gene ABR, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-204ENST00000543210 NISCHQ9Y2I1 1504 aa43.98■■■■■ 4.63
ABR-204ENST00000543210 CCDC180Q9P1Z9 1646 aa39.28■■■■□ 3.88
ABR-204ENST00000543210 ABCC9O60706 1549 aa38.83■■■■□ 3.81
ABR-204ENST00000543210 RB1CC1Q8TDY2 1594 aa37.14■■■■□ 3.54
ABR-204ENST00000543210 NACADO15069 1562 aa37.01■■■■□ 3.52
ABR-204ENST00000543210 DCAF8L2P0C7V8 631 aa36.81■■■■□ 3.48
ABR-204ENST00000543210 MYO15BQ96JP2 1530 aa36.67■■■■□ 3.46
ABR-204ENST00000543210 ZCCHC6Q5VYS8 1495 aaKnown RBP36.56■■■■□ 3.44
ABR-204ENST00000543210 UNC13AQ9UPW8 1703 aa36.39■■■■□ 3.42
ABR-204ENST00000543210 DCAF1Q9Y4B6 1507 aa36.37■■■■□ 3.41
ABR-204ENST00000543210 PABPN1Q86U42 306 aaKnown RBP eCLIP36.19■■■■□ 3.38
ABR-204ENST00000543210 BICRAQ9NZM4 1560 aa36.12■■■■□ 3.37
ABR-204ENST00000543210 DNAJC5BQ9UF47 199 aa36.09■■■■□ 3.37
ABR-204ENST00000543210 SCRIBQ14160 1630 aa35.79■■■■□ 3.32
ABR-204ENST00000543210 SHROOM4Q9ULL8 1493 aa35.62■■■■□ 3.29
ABR-204ENST00000543210 EIF4G1Q04637 1599 aaKnown RBP35.15■■■■□ 3.22
ABR-204ENST00000543210 CC2D2AQ9P2K1 1620 aa35.12■■■■□ 3.21
ABR-204ENST00000543210 CECR2Q9BXF3 1484 aa34.92■■■■□ 3.18
ABR-204ENST00000543210 SMARCA4P51532 1647 aa34.22■■■■□ 3.07
ABR-204ENST00000543210 NCAPD3P42695 1498 aa34.18■■■■□ 3.06
ABR-204ENST00000543210 ATAD2BQ9ULI0 1458 aa34.14■■■■□ 3.06
ABR-204ENST00000543210 BAZ1AQ9NRL2 1556 aaPredicted RBP34.08■■■■□ 3.05
ABR-204ENST00000543210 SMARCA2P51531 1590 aa34.04■■■■□ 3.04
ABR-204ENST00000543210 HMGXB3Q12766 1538 aa33.97■■■■□ 3.03
ABR-204ENST00000543210 PEG3Q9GZU2 1588 aa33.91■■■■□ 3.02
ABR-204ENST00000543210 MROH2BQ7Z745 1585 aa33.9■■■■□ 3.02
ABR-204ENST00000543210 BAZ1BQ9UIG0 1483 aaKnown RBP33.79■■■■□ 3
ABR-204ENST00000543210 WIZO95785 1651 aa33.52■■■□□ 2.96
ABR-204ENST00000543210 NESP48681 1621 aa33.51■■■□□ 2.96
ABR-204ENST00000543210 ERCC6Q03468 1493 aa33.44■■■□□ 2.94
ABR-204ENST00000543210 RSF1Q96T23 1441 aaPredicted RBP33.35■■■□□ 2.93
ABR-204ENST00000543210 LAMC3Q9Y6N6 1575 aa33.32■■■□□ 2.92
ABR-204ENST00000543210 CUX2O14529 1486 aa33.27■■■□□ 2.92
ABR-204ENST00000543210 CADPSQ9ULU8 1353 aa33.13■■■□□ 2.89
ABR-204ENST00000543210 TOP2AP11388 1531 aaKnown RBP33.11■■■□□ 2.89
ABR-204ENST00000543210 KIF21AQ7Z4S6 1674 aa33.1■■■□□ 2.89
ABR-204ENST00000543210 THOC2Q8NI27 1593 aaKnown RBP33.1■■■□□ 2.89
ABR-204ENST00000543210 PDS5BQ9NTI5 1447 aa33.07■■■□□ 2.88
ABR-204ENST00000543210 CFTRP13569 1480 aa32.87■■■□□ 2.85
ABR-204ENST00000543210 MRC2Q9UBG0 1479 aa32.8■■■□□ 2.84
ABR-204ENST00000543210 DNAJC5Q9H3Z4 198 aa32.77■■■□□ 2.84
ABR-204ENST00000543210 FANCD2Q9BXW9 1451 aa32.75■■■□□ 2.83
ABR-204ENST00000543210 CEP164Q9UPV0 1460 aa32.74■■■□□ 2.83
ABR-204ENST00000543210 CCDC88BA6NC98 1476 aa32.73■■■□□ 2.83
ABR-204ENST00000543210 WDR62O43379 1518 aa32.72■■■□□ 2.83
ABR-204ENST00000543210 PRDM2Q13029 1718 aa32.6■■■□□ 2.81
ABR-204ENST00000543210 URB2Q14146 1524 aaKnown RBP32.5■■■□□ 2.79
ABR-204ENST00000543210 SUPT5HO00267 1087 aaKnown RBP32.31■■■□□ 2.76
ABR-204ENST00000543210 TOPBP1Q92547 1522 aa32.21■■■□□ 2.75
ABR-204ENST00000543210 ABCC8Q09428 1581 aa32.12■■■□□ 2.73
ABR-204ENST00000543210 DNMBPQ6XZF7 1577 aa32.12■■■□□ 2.73
ABR-204ENST00000543210 IFT140Q96RY7 1462 aa32.07■■■□□ 2.72
ABR-204ENST00000543210 ZNF608Q9ULD9 1512 aaPredicted RBP32.02■■■□□ 2.72
ABR-204ENST00000543210 TARBP1Q13395 1621 aaKnown RBP31.92■■■□□ 2.7
ABR-204ENST00000543210 POLA1P09884 1462 aaPredicted RBP31.91■■■□□ 2.7
ABR-204ENST00000543210 EIF4G3O43432 1585 aaKnown RBP31.85■■■□□ 2.69
ABR-204ENST00000543210 CUX1P39880 1505 aa31.83■■■□□ 2.69
ABR-204ENST00000543210 OSCARQ8IYS5 282 aa31.79■■■□□ 2.68
ABR-204ENST00000543210 RAD54L2Q9Y4B4 1467 aa31.78■■■□□ 2.68
ABR-204ENST00000543210 AQRO60306 1485 aaKnown RBP eCLIP31.76■■■□□ 2.67
ABR-204ENST00000543210 FGD5Q6ZNL6 1462 aa31.76■■■□□ 2.67
ABR-204ENST00000543210 SOGA1O94964 1423 aa31.73■■■□□ 2.67
ABR-204ENST00000543210 TDRD9Q8NDG6 1382 aaKnown RBP31.63■■■□□ 2.65
ABR-204ENST00000543210 WDR97A6NE52 1622 aa31.58■■■□□ 2.65
ABR-204ENST00000543210 CHD1O14646 1710 aa31.55■■■□□ 2.64
ABR-204ENST00000543210 TRIM41Q8WV44 630 aa31.45■■■□□ 2.63
ABR-204ENST00000543210 BIVM-ERCC5R4GMW8 1640 aa31.44■■■□□ 2.62
ABR-204ENST00000543210 SNAPC4Q5SXM2 1469 aa31.44■■■□□ 2.62
ABR-204ENST00000543210 ABCA10Q8WWZ4 1543 aa31.44■■■□□ 2.62
ABR-204ENST00000543210 TOP2BQ02880 1626 aa31.42■■■□□ 2.62
ABR-204ENST00000543210 WRNQ14191 1432 aaPredicted RBP eCLIP31.41■■■□□ 2.62
ABR-204ENST00000543210 GRIN2BQ13224 1484 aa31.41■■■□□ 2.62
ABR-204ENST00000543210 SYNJ1O43426 1573 aa31.41■■■□□ 2.62
ABR-204ENST00000543210 RIMBP3CA6NJZ7 1639 aa31.39■■■□□ 2.62
ABR-204ENST00000543210 RIMBP3BA6NNM3 1639 aa31.39■■■□□ 2.62
ABR-204ENST00000543210 RIMBP3Q9UFD9 1639 aa31.39■■■□□ 2.62
ABR-204ENST00000543210 FBLN2P98095 1184 aa31.38■■■□□ 2.61
ABR-204ENST00000543210 MAGI1Q96QZ7 1491 aaPredicted RBP31.38■■■□□ 2.61
ABR-204ENST00000543210 ABCA5Q8WWZ7 1642 aa31.37■■■□□ 2.61
ABR-204ENST00000543210 GAPVD1Q14C86 1478 aa31.36■■■□□ 2.61
ABR-204ENST00000543210 PBRM1Q86U86 1689 aa31.35■■■□□ 2.61
ABR-204ENST00000543210 ARHGEF11O15085 1522 aa31.34■■■□□ 2.61
ABR-204ENST00000543210 SYNJ2O15056 1496 aa31.27■■■□□ 2.6
ABR-204ENST00000543210 CHMP7Q8WUX9 453 aaPredicted RBP31.24■■■□□ 2.59
ABR-204ENST00000543210 CLASP1Q7Z460 1538 aa31.2■■■□□ 2.59
ABR-204ENST00000543210 ADAMTS12P58397 1594 aa31.08■■■□□ 2.57
ABR-204ENST00000543210 ARAP1Q96P48 1450 aa31.07■■■□□ 2.56
ABR-204ENST00000543210 ERICH3Q5RHP9 1530 aa31.04■■■□□ 2.56
ABR-204ENST00000543210 GRIN2AQ12879 1464 aa31.02■■■□□ 2.56
ABR-204ENST00000543210 CYB5RLQ6IPT4 315 aa31.02■■■□□ 2.56
ABR-204ENST00000543210 FHAD1B1AJZ9 1412 aa30.98■■■□□ 2.55
ABR-204ENST00000543210 NUP160Q12769 1436 aa30.92■■■□□ 2.54
ABR-204ENST00000543210 CEP170Q5SW79 1584 aa30.92■■■□□ 2.54
ABR-204ENST00000543210 KIF27Q86VH2 1401 aa30.77■■■□□ 2.52
ABR-204ENST00000543210 SHROOM2Q13796 1616 aa30.76■■■□□ 2.52
ABR-204ENST00000543210 ERCC6L2Q5T890 1561 aa30.76■■■□□ 2.52
ABR-204ENST00000543210 IGF1RP08069 1367 aa30.75■■■□□ 2.51
ABR-204ENST00000543210 CUL7Q14999 1698 aa30.66■■■□□ 2.5
ABR-204ENST00000543210 RUSC2Q8N2Y8 1516 aa30.64■■■□□ 2.5
ABR-204ENST00000543210 JPH4Q96JJ6 628 aa30.56■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms