RNA–Protein interactions for RNA: ENST00000542931.6

TDGF1-205, Transcript of teratocarcinoma-derived growth factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TDGF1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDGF1-205ENST00000542931 AEBP2Q6ZN18 517 aaPredicted RBP32.34■■■□□ 2.77
TDGF1-205ENST00000542931 CHIC1Q5VXU3 224 aa31.02■■■□□ 2.56
TDGF1-205ENST00000542931 SENP3Q9H4L4 574 aaPredicted RBP27.42■■□□□ 1.98
TDGF1-205ENST00000542931 PHF23Q9BUL5 403 aaPredicted RBP27.28■■□□□ 1.96
TDGF1-205ENST00000542931 FOXD1Q16676 465 aa25.58■■□□□ 1.69
TDGF1-205ENST00000542931 NISCHQ9Y2I1 1504 aa25.56■■□□□ 1.68
TDGF1-205ENST00000542931 PLPPR3Q6T4P5 718 aa24.91■■□□□ 1.58
TDGF1-205ENST00000542931 PPP6R1Q9UPN7 881 aa24.25■■□□□ 1.47
TDGF1-205ENST00000542931 ADRA2BP18089 450 aa24.15■■□□□ 1.46
TDGF1-205ENST00000542931 PIAS4Q8N2W9 510 aaPredicted RBP23.92■■□□□ 1.42
TDGF1-205ENST00000542931 MSH5O43196 834 aa23.72■■□□□ 1.39
TDGF1-205ENST00000542931 CCDC180Q9P1Z9 1646 aa22.79■■□□□ 1.24
TDGF1-205ENST00000542931 POTEDQ86YR6 584 aa22.56■■□□□ 1.2
TDGF1-205ENST00000542931 MAPK8IP2Q13387 824 aaPredicted RBP22.09■■□□□ 1.13
TDGF1-205ENST00000542931 SCAF1Q9H7N4 1312 aaKnown RBP22.01■■□□□ 1.11
TDGF1-205ENST00000542931 ABCC9O60706 1549 aa21.96■■□□□ 1.11
TDGF1-205ENST00000542931 PPP4R3CPQ6ZMV5 832 aa21.91■■□□□ 1.1
TDGF1-205ENST00000542931 DMRT2Q9Y5R5 561 aa21.84■■□□□ 1.09
TDGF1-205ENST00000542931 CNKSR2Q8WXI2 1034 aa21.4■■□□□ 1.02
TDGF1-205ENST00000542931 ZCCHC6Q5VYS8 1495 aaKnown RBP21.38■■□□□ 1.01
TDGF1-205ENST00000542931 NACADO15069 1562 aa21.31■■□□□ 1
TDGF1-205ENST00000542931 RB1CC1Q8TDY2 1594 aa21.29■■□□□ 1
TDGF1-205ENST00000542931 MYO15BQ96JP2 1530 aa21.27■■□□□ 1
TDGF1-205ENST00000542931 DCAF1Q9Y4B6 1507 aa21.23■□□□□ 0.99
TDGF1-205ENST00000542931 HOXD11P31277 338 aaPredicted RBP21.21■□□□□ 0.99
TDGF1-205ENST00000542931 RNF216Q9NWF9 866 aaPredicted RBP21.13■□□□□ 0.97
TDGF1-205ENST00000542931 NCBP3Q53F19 620 aaKnown RBP21.12■□□□□ 0.97
TDGF1-205ENST00000542931 DCAF8L2P0C7V8 631 aa21.01■□□□□ 0.95
TDGF1-205ENST00000542931 NPM3O75607 178 aaKnown RBP20.9■□□□□ 0.94
TDGF1-205ENST00000542931 UNC13AQ9UPW8 1703 aa20.88■□□□□ 0.93
TDGF1-205ENST00000542931 KCNA4P22459 653 aa20.83■□□□□ 0.93
TDGF1-205ENST00000542931 DCAF8L1A6NGE4 600 aa20.82■□□□□ 0.92
TDGF1-205ENST00000542931 SCRIBQ14160 1630 aa20.7■□□□□ 0.9
TDGF1-205ENST00000542931 BICRAQ9NZM4 1560 aa20.64■□□□□ 0.9
TDGF1-205ENST00000542931 SHROOM4Q9ULL8 1493 aa20.51■□□□□ 0.87
TDGF1-205ENST00000542931 PABPN1Q86U42 306 aaKnown RBP eCLIP20.42■□□□□ 0.86
TDGF1-205ENST00000542931 DNAJC5BQ9UF47 199 aa20.42■□□□□ 0.86
TDGF1-205ENST00000542931 RNF39Q9H2S5 420 aa20.33■□□□□ 0.85
TDGF1-205ENST00000542931 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.12■□□□□ 0.81
TDGF1-205ENST00000542931 CACNB1Q02641 598 aaPredicted RBP20.11■□□□□ 0.81
TDGF1-205ENST00000542931 EIF4G1Q04637 1599 aaKnown RBP20.08■□□□□ 0.8
TDGF1-205ENST00000542931 C1QBPQ07021 282 aaKnown RBP20.02■□□□□ 0.8
TDGF1-205ENST00000542931 CC2D2AQ9P2K1 1620 aa19.94■□□□□ 0.78
TDGF1-205ENST00000542931 SLC4A2P04920 1241 aa19.89■□□□□ 0.77
TDGF1-205ENST00000542931 SMARCA4P51532 1647 aa19.85■□□□□ 0.77
TDGF1-205ENST00000542931 CECR2Q9BXF3 1484 aa19.84■□□□□ 0.77
TDGF1-205ENST00000542931 BAZ1AQ9NRL2 1556 aaPredicted RBP19.83■□□□□ 0.77
TDGF1-205ENST00000542931 U3KPZ7 1027 aaPredicted RBP19.81■□□□□ 0.76
TDGF1-205ENST00000542931 SLC4A1APQ9BWU0 796 aaKnown RBP19.69■□□□□ 0.74
TDGF1-205ENST00000542931 PEG3Q9GZU2 1588 aa19.69■□□□□ 0.74
TDGF1-205ENST00000542931 MROH2BQ7Z745 1585 aa19.68■□□□□ 0.74
TDGF1-205ENST00000542931 SMARCA2P51531 1590 aa19.67■□□□□ 0.74
TDGF1-205ENST00000542931 ATAD2BQ9ULI0 1458 aa19.63■□□□□ 0.73
TDGF1-205ENST00000542931 HMGXB3Q12766 1538 aa19.61■□□□□ 0.73
TDGF1-205ENST00000542931 NCAPD3P42695 1498 aa19.6■□□□□ 0.73
TDGF1-205ENST00000542931 WIZO95785 1651 aa19.49■□□□□ 0.71
TDGF1-205ENST00000542931 BAZ1BQ9UIG0 1483 aaKnown RBP19.49■□□□□ 0.71
TDGF1-205ENST00000542931 RSF1Q96T23 1441 aaPredicted RBP19.48■□□□□ 0.71
TDGF1-205ENST00000542931 SPINK5Q9NQ38 1064 aaPredicted RBP19.41■□□□□ 0.7
TDGF1-205ENST00000542931 TOP2AP11388 1531 aaKnown RBP19.34■□□□□ 0.69
TDGF1-205ENST00000542931 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.29■□□□□ 0.68
TDGF1-205ENST00000542931 CAPN15O75808 1086 aa19.29■□□□□ 0.68
TDGF1-205ENST00000542931 HNRNPUL2Q1KMD3 747 aaKnown RBP19.29■□□□□ 0.68
TDGF1-205ENST00000542931 FOXD4L1Q9NU39 408 aa19.28■□□□□ 0.68
TDGF1-205ENST00000542931 MYCNP04198 464 aaPredicted RBP19.27■□□□□ 0.68
TDGF1-205ENST00000542931 SAMD1Q6SPF0 538 aaPredicted RBP19.22■□□□□ 0.67
TDGF1-205ENST00000542931 ZBTB22O15209 634 aa19.21■□□□□ 0.67
TDGF1-205ENST00000542931 APLP2Q06481 763 aa19.18■□□□□ 0.66
TDGF1-205ENST00000542931 DSG3P32926 999 aa19.16■□□□□ 0.66
TDGF1-205ENST00000542931 LAMC3Q9Y6N6 1575 aa19.13■□□□□ 0.65
TDGF1-205ENST00000542931 TRHP20396 242 aaPredicted RBP19.08■□□□□ 0.64
TDGF1-205ENST00000542931 NESP48681 1621 aa19.06■□□□□ 0.64
TDGF1-205ENST00000542931 ZNF219Q9P2Y4 722 aaPredicted RBP19.05■□□□□ 0.64
TDGF1-205ENST00000542931 CCDC88BA6NC98 1476 aa19.02■□□□□ 0.63
TDGF1-205ENST00000542931 PRDM2Q13029 1718 aa19■□□□□ 0.63
TDGF1-205ENST00000542931 CADPSQ9ULU8 1353 aa18.99■□□□□ 0.63
TDGF1-205ENST00000542931 CFTRP13569 1480 aa18.97■□□□□ 0.63
TDGF1-205ENST00000542931 KIF21AQ7Z4S6 1674 aa18.95■□□□□ 0.62
TDGF1-205ENST00000542931 ERCC6Q03468 1493 aa18.92■□□□□ 0.62
TDGF1-205ENST00000542931 SUPT5HO00267 1087 aaKnown RBP18.92■□□□□ 0.62
TDGF1-205ENST00000542931 ABCB7O75027 752 aa18.9■□□□□ 0.62
TDGF1-205ENST00000542931 PDS5BQ9NTI5 1447 aa18.9■□□□□ 0.62
TDGF1-205ENST00000542931 ATF5Q9Y2D1 282 aaPredicted RBP18.88■□□□□ 0.61
TDGF1-205ENST00000542931 THOC2Q8NI27 1593 aaKnown RBP18.87■□□□□ 0.61
TDGF1-205ENST00000542931 FANCD2Q9BXW9 1451 aa18.82■□□□□ 0.6
TDGF1-205ENST00000542931 CEP164Q9UPV0 1460 aa18.81■□□□□ 0.6
TDGF1-205ENST00000542931 MRC2Q9UBG0 1479 aa18.75■□□□□ 0.59
TDGF1-205ENST00000542931 CUX2O14529 1486 aa18.74■□□□□ 0.59
TDGF1-205ENST00000542931 WDR62O43379 1518 aa18.73■□□□□ 0.59
TDGF1-205ENST00000542931 POLA2Q14181 598 aa18.69■□□□□ 0.58
TDGF1-205ENST00000542931 ATXN8OSP0DMR3 200 aa18.67■□□□□ 0.58
TDGF1-205ENST00000542931 CSRNP3Q8WYN3 585 aa18.64■□□□□ 0.57
TDGF1-205ENST00000542931 URB2Q14146 1524 aaKnown RBP18.64■□□□□ 0.57
TDGF1-205ENST00000542931 DNMBPQ6XZF7 1577 aa18.59■□□□□ 0.57
TDGF1-205ENST00000542931 ABCC8Q09428 1581 aa18.55■□□□□ 0.56
TDGF1-205ENST00000542931 TOPBP1Q92547 1522 aa18.55■□□□□ 0.56
TDGF1-205ENST00000542931 EHMT2Q96KQ7 1210 aa18.52■□□□□ 0.56
TDGF1-205ENST00000542931 CUX1P39880 1505 aa18.47■□□□□ 0.55
TDGF1-205ENST00000542931 BIVM-ERCC5R4GMW8 1640 aa18.43■□□□□ 0.54
TDGF1-205ENST00000542931 POLA1P09884 1462 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms