RNA–Protein interactions for RNA: ENST00000542683.1

C2CD5-213, Transcript of C2 calcium dependent domain containing 5, humanhuman

TSL 5

Gene C2CD5, Length 791 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD5-213ENST00000542683 NISCHQ9Y2I1 1504 aa31.23■■■□□ 2.59
C2CD5-213ENST00000542683 ABCC9O60706 1549 aa28.56■■■□□ 2.16
C2CD5-213ENST00000542683 CCDC180Q9P1Z9 1646 aa28.02■■■□□ 2.08
C2CD5-213ENST00000542683 DNAJC5BQ9UF47 199 aa27.1■■□□□ 1.93
C2CD5-213ENST00000542683 RB1CC1Q8TDY2 1594 aa26.96■■□□□ 1.91
C2CD5-213ENST00000542683 DCAF8L2P0C7V8 631 aa26.81■■□□□ 1.88
C2CD5-213ENST00000542683 NACADO15069 1562 aa26.69■■□□□ 1.86
C2CD5-213ENST00000542683 PABPN1Q86U42 306 aaKnown RBP eCLIP26.64■■□□□ 1.86
C2CD5-213ENST00000542683 MYO15BQ96JP2 1530 aa26.17■■□□□ 1.78
C2CD5-213ENST00000542683 UNC13AQ9UPW8 1703 aa26.13■■□□□ 1.77
C2CD5-213ENST00000542683 BICRAQ9NZM4 1560 aa26.1■■□□□ 1.77
C2CD5-213ENST00000542683 ZCCHC6Q5VYS8 1495 aaKnown RBP25.77■■□□□ 1.72
C2CD5-213ENST00000542683 CECR2Q9BXF3 1484 aa25.76■■□□□ 1.71
C2CD5-213ENST00000542683 SHROOM4Q9ULL8 1493 aa25.76■■□□□ 1.71
C2CD5-213ENST00000542683 DCAF1Q9Y4B6 1507 aa25.72■■□□□ 1.71
C2CD5-213ENST00000542683 CC2D2AQ9P2K1 1620 aa25.68■■□□□ 1.7
C2CD5-213ENST00000542683 SCRIBQ14160 1630 aa25.63■■□□□ 1.69
C2CD5-213ENST00000542683 EIF4G1Q04637 1599 aaKnown RBP25.55■■□□□ 1.68
C2CD5-213ENST00000542683 DNAJC5Q9H3Z4 198 aa25.16■■□□□ 1.62
C2CD5-213ENST00000542683 ERCC6Q03468 1493 aa24.73■■□□□ 1.55
C2CD5-213ENST00000542683 CUX2O14529 1486 aa24.7■■□□□ 1.54
C2CD5-213ENST00000542683 NCAPD3P42695 1498 aa24.69■■□□□ 1.54
C2CD5-213ENST00000542683 ATAD2BQ9ULI0 1458 aa24.57■■□□□ 1.52
C2CD5-213ENST00000542683 SMARCA2P51531 1590 aa24.46■■□□□ 1.51
C2CD5-213ENST00000542683 HMGXB3Q12766 1538 aa24.4■■□□□ 1.5
C2CD5-213ENST00000542683 NESP48681 1621 aa24.39■■□□□ 1.5
C2CD5-213ENST00000542683 SMARCA4P51532 1647 aa24.37■■□□□ 1.49
C2CD5-213ENST00000542683 BAZ1BQ9UIG0 1483 aaKnown RBP24.33■■□□□ 1.49
C2CD5-213ENST00000542683 BAZ1AQ9NRL2 1556 aaPredicted RBP24.26■■□□□ 1.47
C2CD5-213ENST00000542683 PDS5BQ9NTI5 1447 aa24.13■■□□□ 1.45
C2CD5-213ENST00000542683 LAMC3Q9Y6N6 1575 aa24.12■■□□□ 1.45
C2CD5-213ENST00000542683 PEG3Q9GZU2 1588 aa24.11■■□□□ 1.45
C2CD5-213ENST00000542683 THOC2Q8NI27 1593 aaKnown RBP24.09■■□□□ 1.45
C2CD5-213ENST00000542683 MROH2BQ7Z745 1585 aa24.06■■□□□ 1.44
C2CD5-213ENST00000542683 TRIM41Q8WV44 630 aa24.03■■□□□ 1.44
C2CD5-213ENST00000542683 CADPSQ9ULU8 1353 aa23.98■■□□□ 1.43
C2CD5-213ENST00000542683 KIF21AQ7Z4S6 1674 aa23.93■■□□□ 1.42
C2CD5-213ENST00000542683 MRC2Q9UBG0 1479 aa23.87■■□□□ 1.41
C2CD5-213ENST00000542683 WDR62O43379 1518 aa23.75■■□□□ 1.39
C2CD5-213ENST00000542683 CEP164Q9UPV0 1460 aa23.73■■□□□ 1.39
C2CD5-213ENST00000542683 WIZO95785 1651 aa23.7■■□□□ 1.39
C2CD5-213ENST00000542683 OSCARQ8IYS5 282 aa23.68■■□□□ 1.38
C2CD5-213ENST00000542683 FANCD2Q9BXW9 1451 aa23.68■■□□□ 1.38
C2CD5-213ENST00000542683 CFTRP13569 1480 aa23.57■■□□□ 1.36
C2CD5-213ENST00000542683 RSF1Q96T23 1441 aaPredicted RBP23.5■■□□□ 1.35
C2CD5-213ENST00000542683 URB2Q14146 1524 aaKnown RBP23.45■■□□□ 1.34
C2CD5-213ENST00000542683 TOP2AP11388 1531 aaKnown RBP23.41■■□□□ 1.34
C2CD5-213ENST00000542683 IFT140Q96RY7 1462 aa23.27■■□□□ 1.32
C2CD5-213ENST00000542683 ZNF608Q9ULD9 1512 aaPredicted RBP23.24■■□□□ 1.31
C2CD5-213ENST00000542683 CCDC88BA6NC98 1476 aa23.22■■□□□ 1.31
C2CD5-213ENST00000542683 RIMBP3CA6NJZ7 1639 aa23.19■■□□□ 1.3
C2CD5-213ENST00000542683 RIMBP3BA6NNM3 1639 aa23.19■■□□□ 1.3
C2CD5-213ENST00000542683 RIMBP3Q9UFD9 1639 aa23.19■■□□□ 1.3
C2CD5-213ENST00000542683 CYB5RLQ6IPT4 315 aa23.17■■□□□ 1.3
C2CD5-213ENST00000542683 TOPBP1Q92547 1522 aa23.15■■□□□ 1.3
C2CD5-213ENST00000542683 ARHGEF11O15085 1522 aa23.13■■□□□ 1.29
C2CD5-213ENST00000542683 FBLN2P98095 1184 aa23.12■■□□□ 1.29
C2CD5-213ENST00000542683 ABCC8Q09428 1581 aa23.12■■□□□ 1.29
C2CD5-213ENST00000542683 TRHP20396 242 aaPredicted RBP23.08■■□□□ 1.29
C2CD5-213ENST00000542683 PRDM2Q13029 1718 aa23.07■■□□□ 1.28
C2CD5-213ENST00000542683 AQRO60306 1485 aaKnown RBP eCLIP23.05■■□□□ 1.28
C2CD5-213ENST00000542683 EIF4G3O43432 1585 aaKnown RBP23.01■■□□□ 1.27
C2CD5-213ENST00000542683 DNMBPQ6XZF7 1577 aa23.01■■□□□ 1.27
C2CD5-213ENST00000542683 POLA1P09884 1462 aaPredicted RBP22.9■■□□□ 1.26
C2CD5-213ENST00000542683 TDRD9Q8NDG6 1382 aaKnown RBP22.89■■□□□ 1.26
C2CD5-213ENST00000542683 SOGA1O94964 1423 aa22.89■■□□□ 1.25
C2CD5-213ENST00000542683 TARBP1Q13395 1621 aaKnown RBP22.89■■□□□ 1.25
C2CD5-213ENST00000542683 ARAP1Q96P48 1450 aa22.88■■□□□ 1.25
C2CD5-213ENST00000542683 RAD54L2Q9Y4B4 1467 aa22.86■■□□□ 1.25
C2CD5-213ENST00000542683 CHMP7Q8WUX9 453 aaPredicted RBP22.86■■□□□ 1.25
C2CD5-213ENST00000542683 CHD1O14646 1710 aa22.85■■□□□ 1.25
C2CD5-213ENST00000542683 SNAPC4Q5SXM2 1469 aa22.76■■□□□ 1.23
C2CD5-213ENST00000542683 FGD5Q6ZNL6 1462 aa22.73■■□□□ 1.23
C2CD5-213ENST00000542683 GRIN2BQ13224 1484 aa22.67■■□□□ 1.22
C2CD5-213ENST00000542683 MAGI1Q96QZ7 1491 aaPredicted RBP22.67■■□□□ 1.22
C2CD5-213ENST00000542683 AEBP2Q6ZN18 517 aaPredicted RBP22.67■■□□□ 1.22
C2CD5-213ENST00000542683 SYNJ1O43426 1573 aa22.66■■□□□ 1.22
C2CD5-213ENST00000542683 CLASP1Q7Z460 1538 aa22.63■■□□□ 1.21
C2CD5-213ENST00000542683 WDR97A6NE52 1622 aa22.63■■□□□ 1.21
C2CD5-213ENST00000542683 CUX1P39880 1505 aa22.62■■□□□ 1.21
C2CD5-213ENST00000542683 SYNJ2O15056 1496 aa22.61■■□□□ 1.21
C2CD5-213ENST00000542683 GAPVD1Q14C86 1478 aa22.55■■□□□ 1.2
C2CD5-213ENST00000542683 ABCA10Q8WWZ4 1543 aa22.43■■□□□ 1.18
C2CD5-213ENST00000542683 SUPT5HO00267 1087 aaKnown RBP22.41■■□□□ 1.18
C2CD5-213ENST00000542683 PBRM1Q86U86 1689 aa22.39■■□□□ 1.17
C2CD5-213ENST00000542683 WRNQ14191 1432 aaPredicted RBP eCLIP22.37■■□□□ 1.17
C2CD5-213ENST00000542683 GRIN2AQ12879 1464 aa22.35■■□□□ 1.17
C2CD5-213ENST00000542683 ABCA5Q8WWZ7 1642 aa22.33■■□□□ 1.17
C2CD5-213ENST00000542683 ERCC6L2Q5T890 1561 aa22.29■■□□□ 1.16
C2CD5-213ENST00000542683 NUP160Q12769 1436 aa22.27■■□□□ 1.16
C2CD5-213ENST00000542683 FHAD1B1AJZ9 1412 aa22.26■■□□□ 1.15
C2CD5-213ENST00000542683 CEP170Q5SW79 1584 aa22.25■■□□□ 1.15
C2CD5-213ENST00000542683 ADAMTS12P58397 1594 aa22.22■■□□□ 1.15
C2CD5-213ENST00000542683 JPH4Q96JJ6 628 aa22.19■■□□□ 1.14
C2CD5-213ENST00000542683 PRG4Q92954 1404 aaPredicted RBP22.17■■□□□ 1.14
C2CD5-213ENST00000542683 NPM1P06748 294 aaKnown RBP eCLIP22.17■■□□□ 1.14
C2CD5-213ENST00000542683 TOP2BQ02880 1626 aa22.13■■□□□ 1.13
C2CD5-213ENST00000542683 ERICH3Q5RHP9 1530 aa22.13■■□□□ 1.13
C2CD5-213ENST00000542683 FAM69CQ0P6D2 419 aa22.11■■□□□ 1.13
C2CD5-213ENST00000542683 SHROOM2Q13796 1616 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms