RNA–Protein interactions for RNA: ENST00000542643.6

RAP1GAP-212, Transcript of RAP1 GTPase activating protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAP1GAP, Length 3,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1GAP-212ENST00000542643 NISCHQ9Y2I1 1504 aa21.86■■□□□ 1.09
RAP1GAP-212ENST00000542643 CCDC180Q9P1Z9 1646 aa19.53■□□□□ 0.72
RAP1GAP-212ENST00000542643 ZCCHC6Q5VYS8 1495 aaKnown RBP18.36■□□□□ 0.53
RAP1GAP-212ENST00000542643 DCAF1Q9Y4B6 1507 aa18.34■□□□□ 0.53
RAP1GAP-212ENST00000542643 MYO15BQ96JP2 1530 aa18.32■□□□□ 0.52
RAP1GAP-212ENST00000542643 ABCC9O60706 1549 aa18.13■□□□□ 0.49
RAP1GAP-212ENST00000542643 NACADO15069 1562 aa18.08■□□□□ 0.49
RAP1GAP-212ENST00000542643 RB1CC1Q8TDY2 1594 aa17.92■□□□□ 0.46
RAP1GAP-212ENST00000542643 UNC13AQ9UPW8 1703 aa17.87■□□□□ 0.45
RAP1GAP-212ENST00000542643 BICRAQ9NZM4 1560 aa17.56■□□□□ 0.4
RAP1GAP-212ENST00000542643 DCAF8L2P0C7V8 631 aa17.5■□□□□ 0.39
RAP1GAP-212ENST00000542643 SHROOM4Q9ULL8 1493 aa17.46■□□□□ 0.39
RAP1GAP-212ENST00000542643 SCRIBQ14160 1630 aa17.45■□□□□ 0.38
RAP1GAP-212ENST00000542643 HRCP23327 699 aa17.3■□□□□ 0.36
RAP1GAP-212ENST00000542643 PPARGC1BQ86YN6 1023 aaKnown RBP17.21■□□□□ 0.35
RAP1GAP-212ENST00000542643 PCGF6Q9BYE7 350 aa17.12■□□□□ 0.33
RAP1GAP-212ENST00000542643 SUPT5HO00267 1087 aaKnown RBP17.09■□□□□ 0.33
RAP1GAP-212ENST00000542643 PEG3Q9GZU2 1588 aa16.97■□□□□ 0.31
RAP1GAP-212ENST00000542643 SMARCA4P51532 1647 aa16.93■□□□□ 0.3
RAP1GAP-212ENST00000542643 EIF4G1Q04637 1599 aaKnown RBP16.9■□□□□ 0.3
RAP1GAP-212ENST00000542643 BAZ1AQ9NRL2 1556 aaPredicted RBP16.89■□□□□ 0.29
RAP1GAP-212ENST00000542643 CECR2Q9BXF3 1484 aa16.85■□□□□ 0.29
RAP1GAP-212ENST00000542643 PELP1Q8IZL8 1130 aaKnown RBP16.83■□□□□ 0.29
RAP1GAP-212ENST00000542643 PABPN1Q86U42 306 aaKnown RBP eCLIP16.81■□□□□ 0.28
RAP1GAP-212ENST00000542643 MROH2BQ7Z745 1585 aa16.79■□□□□ 0.28
RAP1GAP-212ENST00000542643 CC2D2AQ9P2K1 1620 aa16.72■□□□□ 0.27
RAP1GAP-212ENST00000542643 RSF1Q96T23 1441 aaPredicted RBP16.69■□□□□ 0.26
RAP1GAP-212ENST00000542643 HMGXB3Q12766 1538 aa16.69■□□□□ 0.26
RAP1GAP-212ENST00000542643 WIZO95785 1651 aa16.68■□□□□ 0.26
RAP1GAP-212ENST00000542643 SMARCA2P51531 1590 aa16.66■□□□□ 0.26
RAP1GAP-212ENST00000542643 NCAPD3P42695 1498 aa16.62■□□□□ 0.25
RAP1GAP-212ENST00000542643 ATAD2BQ9ULI0 1458 aa16.62■□□□□ 0.25
RAP1GAP-212ENST00000542643 CHIC1Q5VXU3 224 aa16.56■□□□□ 0.24
RAP1GAP-212ENST00000542643 SCAF1Q9H7N4 1312 aaKnown RBP16.56■□□□□ 0.24
RAP1GAP-212ENST00000542643 TOP2AP11388 1531 aaKnown RBP16.55■□□□□ 0.24
RAP1GAP-212ENST00000542643 LOC105371045A0A1W2PR82 267 aa16.42■□□□□ 0.22
RAP1GAP-212ENST00000542643 PRDM2Q13029 1718 aa16.41■□□□□ 0.22
RAP1GAP-212ENST00000542643 BAZ1BQ9UIG0 1483 aaKnown RBP16.38■□□□□ 0.21
RAP1GAP-212ENST00000542643 DNAJC5BQ9UF47 199 aa16.35■□□□□ 0.21
RAP1GAP-212ENST00000542643 TRIM26Q12899 539 aaPredicted RBP16.29■□□□□ 0.2
RAP1GAP-212ENST00000542643 CCDC88BA6NC98 1476 aa16.23■□□□□ 0.19
RAP1GAP-212ENST00000542643 LAMC3Q9Y6N6 1575 aa16.17■□□□□ 0.18
RAP1GAP-212ENST00000542643 MYT1Q01538 1121 aa16.17■□□□□ 0.18
RAP1GAP-212ENST00000542643 ZEB1P37275 1124 aaPredicted RBP16.14■□□□□ 0.17
RAP1GAP-212ENST00000542643 CFTRP13569 1480 aa16.13■□□□□ 0.17
RAP1GAP-212ENST00000542643 NEUROD1Q13562 356 aa16.08■□□□□ 0.16
RAP1GAP-212ENST00000542643 EHMT2Q96KQ7 1210 aa16.07■□□□□ 0.16
RAP1GAP-212ENST00000542643 GTF3C3Q9Y5Q9 886 aa16.07■□□□□ 0.16
RAP1GAP-212ENST00000542643 ACIN1Q9UKV3 1341 aaKnown RBP16.06■□□□□ 0.16
RAP1GAP-212ENST00000542643 KIF21AQ7Z4S6 1674 aa16.01■□□□□ 0.15
RAP1GAP-212ENST00000542643 CADPSQ9ULU8 1353 aa15.99■□□□□ 0.15
RAP1GAP-212ENST00000542643 THOC2Q8NI27 1593 aaKnown RBP15.93■□□□□ 0.14
RAP1GAP-212ENST00000542643 NESP48681 1621 aa15.93■□□□□ 0.14
RAP1GAP-212ENST00000542643 BIVM-ERCC5R4GMW8 1640 aa15.92■□□□□ 0.14
RAP1GAP-212ENST00000542643 FAM9AQ8IZU1 332 aaPredicted RBP15.9■□□□□ 0.14
RAP1GAP-212ENST00000542643 CENPBP07199 599 aaPredicted RBP15.9■□□□□ 0.14
RAP1GAP-212ENST00000542643 WDR62O43379 1518 aa15.83■□□□□ 0.13
RAP1GAP-212ENST00000542643 YTHDC1Q96MU7 727 aaKnown RBP15.82■□□□□ 0.12
RAP1GAP-212ENST00000542643 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.82■□□□□ 0.12
RAP1GAP-212ENST00000542643 TOP2BQ02880 1626 aa15.81■□□□□ 0.12
RAP1GAP-212ENST00000542643 FANCD2Q9BXW9 1451 aa15.81■□□□□ 0.12
RAP1GAP-212ENST00000542643 WDR97A6NE52 1622 aa15.8■□□□□ 0.12
RAP1GAP-212ENST00000542643 CCER1Q8TC90 406 aaPredicted RBP15.78■□□□□ 0.12
RAP1GAP-212ENST00000542643 DNMBPQ6XZF7 1577 aa15.78■□□□□ 0.12
RAP1GAP-212ENST00000542643 PDS5BQ9NTI5 1447 aa15.78■□□□□ 0.12
RAP1GAP-212ENST00000542643 DIEXFQ68CQ4 756 aaKnown RBP15.78■□□□□ 0.12
RAP1GAP-212ENST00000542643 SYNJ1O43426 1573 aa15.76■□□□□ 0.11
RAP1GAP-212ENST00000542643 CUX1P39880 1505 aa15.76■□□□□ 0.11
RAP1GAP-212ENST00000542643 URB2Q14146 1524 aaKnown RBP15.75■□□□□ 0.11
RAP1GAP-212ENST00000542643 CEP164Q9UPV0 1460 aa15.74■□□□□ 0.11
RAP1GAP-212ENST00000542643 ABCC8Q09428 1581 aa15.71■□□□□ 0.11
RAP1GAP-212ENST00000542643 MRC2Q9UBG0 1479 aa15.71■□□□□ 0.1
RAP1GAP-212ENST00000542643 TARBP1Q13395 1621 aaKnown RBP15.69■□□□□ 0.1
RAP1GAP-212ENST00000542643 TTBK1Q5TCY1 1321 aaPredicted RBP15.68■□□□□ 0.1
RAP1GAP-212ENST00000542643 TOPBP1Q92547 1522 aa15.68■□□□□ 0.1
RAP1GAP-212ENST00000542643 TRIM41Q8WV44 630 aa15.62■□□□□ 0.09
RAP1GAP-212ENST00000542643 WRNQ14191 1432 aaPredicted RBP eCLIP15.6■□□□□ 0.09
RAP1GAP-212ENST00000542643 CUX2O14529 1486 aa15.59■□□□□ 0.09
RAP1GAP-212ENST00000542643 ABCA5Q8WWZ7 1642 aa15.57■□□□□ 0.08
RAP1GAP-212ENST00000542643 POLA1P09884 1462 aaPredicted RBP15.56■□□□□ 0.08
RAP1GAP-212ENST00000542643 SLC24A1O60721 1099 aa15.53■□□□□ 0.08
RAP1GAP-212ENST00000542643 ABCA10Q8WWZ4 1543 aa15.53■□□□□ 0.08
RAP1GAP-212ENST00000542643 FGD5Q6ZNL6 1462 aa15.52■□□□□ 0.08
RAP1GAP-212ENST00000542643 ERCC6Q03468 1493 aa15.51■□□□□ 0.07
RAP1GAP-212ENST00000542643 PBRM1Q86U86 1689 aa15.49■□□□□ 0.07
RAP1GAP-212ENST00000542643 IFT140Q96RY7 1462 aa15.46■□□□□ 0.07
RAP1GAP-212ENST00000542643 EIF4G3O43432 1585 aaKnown RBP15.43■□□□□ 0.06
RAP1GAP-212ENST00000542643 ERICH3Q5RHP9 1530 aa15.38■□□□□ 0.05
RAP1GAP-212ENST00000542643 BCL11AQ9H165 835 aa15.37■□□□□ 0.05
RAP1GAP-212ENST00000542643 MIER1Q8N108 512 aa15.37■□□□□ 0.05
RAP1GAP-212ENST00000542643 RAD54L2Q9Y4B4 1467 aa15.36■□□□□ 0.05
RAP1GAP-212ENST00000542643 CUL7Q14999 1698 aa15.36■□□□□ 0.05
RAP1GAP-212ENST00000542643 ZNF316A6NFI3 1004 aaPredicted RBP15.35■□□□□ 0.05
RAP1GAP-212ENST00000542643 SOGA1O94964 1423 aa15.33■□□□□ 0.04
RAP1GAP-212ENST00000542643 ZNF608Q9ULD9 1512 aaPredicted RBP15.31■□□□□ 0.04
RAP1GAP-212ENST00000542643 ADAMTS12P58397 1594 aa15.3■□□□□ 0.04
RAP1GAP-212ENST00000542643 KIF21BO75037 1637 aa15.29■□□□□ 0.04
RAP1GAP-212ENST00000542643 EEA1Q15075 1411 aa15.29■□□□□ 0.04
RAP1GAP-212ENST00000542643 RUSC2Q8N2Y8 1516 aa15.26■□□□□ 0.03
RAP1GAP-212ENST00000542643 GAPVD1Q14C86 1478 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms