RNA–Protein interactions for RNA: ENST00000542643.6

RAP1GAP-212, Transcript of RAP1 GTPase activating protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAP1GAP, Length 3,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1GAP-212ENST00000542643 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.01□□□□□ -0.651e-6■■■■■ 139
RAP1GAP-212ENST00000542643 SF3B1O75533 1304 aaKnown RBP eCLIP10.61□□□□□ -0.712e-6■■■■■ 117.9
RAP1GAP-212ENST00000542643 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.07□□□□□ -0.641e-6■■■■■ 117.5
RAP1GAP-212ENST00000542643 RBFOX2O43251 390 aaKnown RBP eCLIP8.72□□□□□ -1.012e-7■■■■■ 103.6
RAP1GAP-212ENST00000542643 DDX6P26196 483 aaKnown RBP eCLIP9.42□□□□□ -0.92e-7■■■■■ 100.1
RAP1GAP-212ENST00000542643 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.15□□□□□ -0.141e-6■■■■■ 96.5
RAP1GAP-212ENST00000542643 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.99□□□□□ -0.651e-9■■■■■ 71.6
RAP1GAP-212ENST00000542643 AARSP49588 968 aaKnown RBP eCLIP11.54□□□□□ -0.561e-6■■■■■ 60.5
RAP1GAP-212ENST00000542643 PABPC4Q13310 644 aaKnown RBP eCLIP10.9□□□□□ -0.662e-6■■■■■ 52.6
RAP1GAP-212ENST00000542643 MATR3P43243 847 aaKnown RBP eCLIP11.61□□□□□ -0.552e-14■■■■■ 50.7
RAP1GAP-212ENST00000542643 SF3A3Q12874 501 aaKnown RBP eCLIP11.56□□□□□ -0.562e-6■■■■■ 49.4
RAP1GAP-212ENST00000542643 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.95□□□□□ -0.824e-8■■■■■ 48.7
RAP1GAP-212ENST00000542643 AGGF1Q8N302 714 aaeCLIP10.99□□□□□ -0.651e-7■■■■■ 42.2
RAP1GAP-212ENST00000542643 HNRNPMP52272 730 aaKnown RBP eCLIP13.66□□□□□ -0.226e-7■■■■■ 40.6
RAP1GAP-212ENST00000542643 SF3B4Q15427 424 aaKnown RBP eCLIP10.47□□□□□ -0.731e-7■■■■■ 39.6
RAP1GAP-212ENST00000542643 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.86□□□□□ -0.836e-20■■■■■ 34.8
RAP1GAP-212ENST00000542643 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.12□□□□□ -0.955e-7■■■■■ 34.8
RAP1GAP-212ENST00000542643 AKAP1Q92667 903 aaKnown RBP eCLIP9.95□□□□□ -0.823e-6■■■■■ 34.1
RAP1GAP-212ENST00000542643 UPF1Q92900 1129 aaKnown RBP eCLIP11.47□□□□□ -0.579e-8■■■■■ 34
RAP1GAP-212ENST00000542643 AQRO60306 1485 aaKnown RBP eCLIP15.17■□□□□ 0.025e-7■■■■■ 33.3
RAP1GAP-212ENST00000542643 DKC1O60832 514 aaKnown RBP eCLIP10.8□□□□□ -0.681e-6■■■■■ 30
RAP1GAP-212ENST00000542643 TARDBPQ13148 414 aaKnown RBP eCLIP9.97□□□□□ -0.811e-6■■■■■ 26.9
RAP1GAP-212ENST00000542643 HNRNPLP14866 589 aaKnown RBP eCLIP10.37□□□□□ -0.754e-9■■■■□ 26.6
RAP1GAP-212ENST00000542643 QKIQ96PU8 341 aaKnown RBP eCLIP10.26□□□□□ -0.771e-6■■■■□ 26
RAP1GAP-212ENST00000542643 ZC3H11AO75152 810 aaKnown RBP eCLIP10.59□□□□□ -0.714e-6■■■■□ 25.4
RAP1GAP-212ENST00000542643 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.33□□□□□ -0.762e-6■■■■□ 24.8
RAP1GAP-212ENST00000542643 RBM22Q9NW64 420 aaKnown RBP eCLIP10.04□□□□□ -0.84e-6■■■■□ 24.3
RAP1GAP-212ENST00000542643 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.3□□□□□ -0.69e-7■■■■□ 23.8
RAP1GAP-212ENST00000542643 EWSR1Q01844 656 aaKnown RBP eCLIP8.99□□□□□ -0.973e-7■■■■□ 21.8
RAP1GAP-212ENST00000542643 PCBP2Q15366 365 aaKnown RBP eCLIP9.78□□□□□ -0.842e-6■■■■□ 21.5
RAP1GAP-212ENST00000542643 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.67□□□□□ -0.75e-7■■■■□ 21.4
RAP1GAP-212ENST00000542643 NONOQ15233 471 aaKnown RBP eCLIP11□□□□□ -0.653e-6■■■■□ 21.1
RAP1GAP-212ENST00000542643 PRPF4O43172 522 aaKnown RBP eCLIP10.77□□□□□ -0.691e-6■■■■□ 21.1
RAP1GAP-212ENST00000542643 EFTUD2Q15029 972 aaKnown RBP eCLIP10.82□□□□□ -0.684e-6■■■■□ 20.1
RAP1GAP-212ENST00000542643 EIF4G2P78344 907 aaKnown RBP eCLIP13.74□□□□□ -0.215e-7■■■■□ 19.6
RAP1GAP-212ENST00000542643 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.25□□□□□ -0.611e-6■■■■□ 19.6
RAP1GAP-212ENST00000542643 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.94□□□□□ -0.822e-7■■■■□ 19.6
RAP1GAP-212ENST00000542643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.26□□□□□ -0.296e-6■■■□□ 19.2
RAP1GAP-212ENST00000542643 FXR2P51116 673 aaKnown RBP eCLIP10.86□□□□□ -0.672e-6■■■□□ 19.1
RAP1GAP-212ENST00000542643 GTF2F1P35269 517 aaKnown RBP eCLIP12.37□□□□□ -0.431e-6■■■□□ 19.1
RAP1GAP-212ENST00000542643 PTBP1P26599 531 aaKnown RBP eCLIP9.6□□□□□ -0.879e-7■■■□□ 18.8
RAP1GAP-212ENST00000542643 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.67□□□□□ -1.186e-7■■■□□ 18.5
RAP1GAP-212ENST00000542643 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.48□□□□□ -0.732e-6■■■□□ 18.2
RAP1GAP-212ENST00000542643 YBX3P16989 372 aaKnown RBP eCLIP10.94□□□□□ -0.663e-8■■■□□ 17.9
RAP1GAP-212ENST00000542643 DDX3XO00571 662 aaKnown RBP eCLIP10.98□□□□□ -0.651e-6■■■□□ 16.8
RAP1GAP-212ENST00000542643 PPIGQ13427 754 aaKnown RBP eCLIP9.86□□□□□ -0.832e-6■■■□□ 15.6
RAP1GAP-212ENST00000542643 FMR1Q06787 632 aaKnown RBP eCLIP11.64□□□□□ -0.553e-7■■■□□ 15.5
RAP1GAP-212ENST00000542643 NKRFO15226 690 aaKnown RBP eCLIP11.29□□□□□ -0.69e-7■■■□□ 14.9
RAP1GAP-212ENST00000542643 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.29□□□□□ -0.127e-7■■□□□ 14.3
RAP1GAP-212ENST00000542643 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.12□□□□□ -0.631e-6■■□□□ 14
RAP1GAP-212ENST00000542643 PCBP1Q15365 356 aaKnown RBP eCLIP9.88□□□□□ -0.839e-6■■□□□ 13.3
RAP1GAP-212ENST00000542643 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.19□□□□□ -0.788e-8■■□□□ 12.4
RAP1GAP-212ENST00000542643 ZNF622Q969S3 477 aaKnown RBP eCLIP11.64□□□□□ -0.559e-7■■□□□ 11.4
RAP1GAP-212ENST00000542643 METAP2P50579 478 aaKnown RBP eCLIP11.52□□□□□ -0.571e-6■□□□□ 10
RAP1GAP-212ENST00000542643 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.01□□□□□ -0.492e-6■□□□□ 8.8
RAP1GAP-212ENST00000542643 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11□□□□□ -0.652e-6■□□□□ 8.2
Retrieved 56 of 56 RNA–protein pairs in 13.3 ms