RNA–Protein interactions for RNA: ENST00000542580.1

LAMB2-219, Transcript of laminin subunit beta 2, humanhuman

TSL 2

Gene LAMB2, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB2-219ENST00000542580 NISCHQ9Y2I1 1504 aa39.72■■■■□ 3.95
LAMB2-219ENST00000542580 CCDC180Q9P1Z9 1646 aa35.53■■■■□ 3.28
LAMB2-219ENST00000542580 ABCC9O60706 1549 aa35.25■■■■□ 3.23
LAMB2-219ENST00000542580 RB1CC1Q8TDY2 1594 aa33.68■■■□□ 2.98
LAMB2-219ENST00000542580 NACADO15069 1562 aa33.53■■■□□ 2.96
LAMB2-219ENST00000542580 DCAF8L2P0C7V8 631 aa33.42■■■□□ 2.94
LAMB2-219ENST00000542580 MYO15BQ96JP2 1530 aa33.18■■■□□ 2.9
LAMB2-219ENST00000542580 ZCCHC6Q5VYS8 1495 aaKnown RBP32.96■■■□□ 2.87
LAMB2-219ENST00000542580 UNC13AQ9UPW8 1703 aa32.94■■■□□ 2.86
LAMB2-219ENST00000542580 PABPN1Q86U42 306 aaKnown RBP eCLIP32.87■■■□□ 2.85
LAMB2-219ENST00000542580 DNAJC5BQ9UF47 199 aa32.86■■■□□ 2.85
LAMB2-219ENST00000542580 DCAF1Q9Y4B6 1507 aa32.84■■■□□ 2.85
LAMB2-219ENST00000542580 BICRAQ9NZM4 1560 aa32.7■■■□□ 2.82
LAMB2-219ENST00000542580 SCRIBQ14160 1630 aa32.37■■■□□ 2.77
LAMB2-219ENST00000542580 SHROOM4Q9ULL8 1493 aa32.29■■■□□ 2.76
LAMB2-219ENST00000542580 CC2D2AQ9P2K1 1620 aa31.86■■■□□ 2.69
LAMB2-219ENST00000542580 EIF4G1Q04637 1599 aaKnown RBP31.86■■■□□ 2.69
LAMB2-219ENST00000542580 CECR2Q9BXF3 1484 aa31.73■■■□□ 2.67
LAMB2-219ENST00000542580 NCAPD3P42695 1498 aa30.95■■■□□ 2.55
LAMB2-219ENST00000542580 SMARCA4P51532 1647 aa30.92■■■□□ 2.54
LAMB2-219ENST00000542580 ATAD2BQ9ULI0 1458 aa30.89■■■□□ 2.53
LAMB2-219ENST00000542580 SMARCA2P51531 1590 aa30.83■■■□□ 2.53
LAMB2-219ENST00000542580 BAZ1AQ9NRL2 1556 aaPredicted RBP30.81■■■□□ 2.52
LAMB2-219ENST00000542580 HMGXB3Q12766 1538 aa30.73■■■□□ 2.51
LAMB2-219ENST00000542580 PEG3Q9GZU2 1588 aa30.63■■■□□ 2.49
LAMB2-219ENST00000542580 MROH2BQ7Z745 1585 aa30.6■■■□□ 2.49
LAMB2-219ENST00000542580 BAZ1BQ9UIG0 1483 aaKnown RBP30.6■■■□□ 2.49
LAMB2-219ENST00000542580 ERCC6Q03468 1493 aa30.42■■■□□ 2.46
LAMB2-219ENST00000542580 NESP48681 1621 aa30.36■■■□□ 2.45
LAMB2-219ENST00000542580 CUX2O14529 1486 aa30.28■■■□□ 2.44
LAMB2-219ENST00000542580 WIZO95785 1651 aa30.24■■■□□ 2.43
LAMB2-219ENST00000542580 LAMC3Q9Y6N6 1575 aa30.2■■■□□ 2.43
LAMB2-219ENST00000542580 RSF1Q96T23 1441 aaPredicted RBP30.07■■■□□ 2.4
LAMB2-219ENST00000542580 PDS5BQ9NTI5 1447 aa30.04■■■□□ 2.4
LAMB2-219ENST00000542580 CADPSQ9ULU8 1353 aa30.03■■■□□ 2.4
LAMB2-219ENST00000542580 DNAJC5Q9H3Z4 198 aa30■■■□□ 2.39
LAMB2-219ENST00000542580 THOC2Q8NI27 1593 aaKnown RBP29.99■■■□□ 2.39
LAMB2-219ENST00000542580 KIF21AQ7Z4S6 1674 aa29.98■■■□□ 2.39
LAMB2-219ENST00000542580 TOP2AP11388 1531 aaKnown RBP29.88■■■□□ 2.37
LAMB2-219ENST00000542580 CFTRP13569 1480 aa29.74■■■□□ 2.35
LAMB2-219ENST00000542580 MRC2Q9UBG0 1479 aa29.74■■■□□ 2.35
LAMB2-219ENST00000542580 FANCD2Q9BXW9 1451 aa29.67■■■□□ 2.34
LAMB2-219ENST00000542580 CEP164Q9UPV0 1460 aa29.67■■■□□ 2.34
LAMB2-219ENST00000542580 WDR62O43379 1518 aa29.65■■■□□ 2.34
LAMB2-219ENST00000542580 CCDC88BA6NC98 1476 aa29.55■■■□□ 2.32
LAMB2-219ENST00000542580 PRDM2Q13029 1718 aa29.46■■■□□ 2.31
LAMB2-219ENST00000542580 URB2Q14146 1524 aaKnown RBP29.4■■■□□ 2.3
LAMB2-219ENST00000542580 TOPBP1Q92547 1522 aa29.14■■■□□ 2.25
LAMB2-219ENST00000542580 ABCC8Q09428 1581 aa29.12■■■□□ 2.25
LAMB2-219ENST00000542580 IFT140Q96RY7 1462 aa29.08■■■□□ 2.25
LAMB2-219ENST00000542580 DNMBPQ6XZF7 1577 aa29.05■■■□□ 2.24
LAMB2-219ENST00000542580 ZNF608Q9ULD9 1512 aaPredicted RBP28.99■■■□□ 2.23
LAMB2-219ENST00000542580 OSCARQ8IYS5 282 aa28.98■■■□□ 2.23
LAMB2-219ENST00000542580 SUPT5HO00267 1087 aaKnown RBP28.95■■■□□ 2.22
LAMB2-219ENST00000542580 TARBP1Q13395 1621 aaKnown RBP28.87■■■□□ 2.21
LAMB2-219ENST00000542580 POLA1P09884 1462 aaPredicted RBP28.85■■■□□ 2.21
LAMB2-219ENST00000542580 EIF4G3O43432 1585 aaKnown RBP28.84■■■□□ 2.21
LAMB2-219ENST00000542580 AQRO60306 1485 aaKnown RBP eCLIP28.78■■■□□ 2.2
LAMB2-219ENST00000542580 TRIM41Q8WV44 630 aa28.75■■■□□ 2.19
LAMB2-219ENST00000542580 SOGA1O94964 1423 aa28.75■■■□□ 2.19
LAMB2-219ENST00000542580 RAD54L2Q9Y4B4 1467 aa28.74■■■□□ 2.19
LAMB2-219ENST00000542580 CUX1P39880 1505 aa28.73■■■□□ 2.19
LAMB2-219ENST00000542580 FGD5Q6ZNL6 1462 aa28.71■■■□□ 2.19
LAMB2-219ENST00000542580 TDRD9Q8NDG6 1382 aaKnown RBP28.65■■■□□ 2.18
LAMB2-219ENST00000542580 CHD1O14646 1710 aa28.6■■■□□ 2.17
LAMB2-219ENST00000542580 WDR97A6NE52 1622 aa28.59■■■□□ 2.17
LAMB2-219ENST00000542580 FBLN2P98095 1184 aa28.55■■■□□ 2.16
LAMB2-219ENST00000542580 RIMBP3CA6NJZ7 1639 aa28.54■■■□□ 2.16
LAMB2-219ENST00000542580 RIMBP3BA6NNM3 1639 aa28.54■■■□□ 2.16
LAMB2-219ENST00000542580 RIMBP3Q9UFD9 1639 aa28.54■■■□□ 2.16
LAMB2-219ENST00000542580 SNAPC4Q5SXM2 1469 aa28.47■■■□□ 2.15
LAMB2-219ENST00000542580 ARHGEF11O15085 1522 aa28.47■■■□□ 2.15
LAMB2-219ENST00000542580 GRIN2BQ13224 1484 aa28.46■■■□□ 2.15
LAMB2-219ENST00000542580 MAGI1Q96QZ7 1491 aaPredicted RBP28.43■■■□□ 2.14
LAMB2-219ENST00000542580 ABCA10Q8WWZ4 1543 aa28.42■■■□□ 2.14
LAMB2-219ENST00000542580 GAPVD1Q14C86 1478 aa28.4■■■□□ 2.14
LAMB2-219ENST00000542580 CHMP7Q8WUX9 453 aaPredicted RBP28.39■■■□□ 2.14
LAMB2-219ENST00000542580 WRNQ14191 1432 aaPredicted RBP eCLIP28.36■■■□□ 2.13
LAMB2-219ENST00000542580 TOP2BQ02880 1626 aa28.36■■■□□ 2.13
LAMB2-219ENST00000542580 PBRM1Q86U86 1689 aa28.35■■■□□ 2.13
LAMB2-219ENST00000542580 BIVM-ERCC5R4GMW8 1640 aa28.35■■■□□ 2.13
LAMB2-219ENST00000542580 SYNJ2O15056 1496 aa28.34■■■□□ 2.13
LAMB2-219ENST00000542580 ABCA5Q8WWZ7 1642 aa28.33■■■□□ 2.13
LAMB2-219ENST00000542580 SYNJ1O43426 1573 aa28.31■■■□□ 2.12
LAMB2-219ENST00000542580 CYB5RLQ6IPT4 315 aa28.27■■■□□ 2.12
LAMB2-219ENST00000542580 CLASP1Q7Z460 1538 aa28.27■■■□□ 2.12
LAMB2-219ENST00000542580 ARAP1Q96P48 1450 aa28.21■■■□□ 2.11
LAMB2-219ENST00000542580 ADAMTS12P58397 1594 aa28.09■■■□□ 2.09
LAMB2-219ENST00000542580 GRIN2AQ12879 1464 aa28.08■■■□□ 2.09
LAMB2-219ENST00000542580 ERICH3Q5RHP9 1530 aa28.07■■■□□ 2.08
LAMB2-219ENST00000542580 FHAD1B1AJZ9 1412 aa28.05■■■□□ 2.08
LAMB2-219ENST00000542580 NUP160Q12769 1436 aa27.99■■■□□ 2.07
LAMB2-219ENST00000542580 CEP170Q5SW79 1584 aa27.96■■■□□ 2.07
LAMB2-219ENST00000542580 TRHP20396 242 aaPredicted RBP27.86■■■□□ 2.05
LAMB2-219ENST00000542580 ERCC6L2Q5T890 1561 aa27.84■■■□□ 2.05
LAMB2-219ENST00000542580 SHROOM2Q13796 1616 aa27.84■■■□□ 2.05
LAMB2-219ENST00000542580 KIF27Q86VH2 1401 aa27.81■■■□□ 2.04
LAMB2-219ENST00000542580 IGF1RP08069 1367 aa27.79■■■□□ 2.04
LAMB2-219ENST00000542580 JPH4Q96JJ6 628 aa27.73■■■□□ 2.03
LAMB2-219ENST00000542580 CUL7Q14999 1698 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms