RNA–Protein interactions for RNA: ENST00000542361.5

CYB561A3-217, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-217ENST00000542361 NISCHQ9Y2I1 1504 aa34.08■■■■□ 3.05
CYB561A3-217ENST00000542361 CCDC180Q9P1Z9 1646 aa30.17■■■□□ 2.42
CYB561A3-217ENST00000542361 ABCC9O60706 1549 aa29.04■■■□□ 2.24
CYB561A3-217ENST00000542361 ZCCHC6Q5VYS8 1495 aaKnown RBP28.52■■■□□ 2.16
CYB561A3-217ENST00000542361 DCAF1Q9Y4B6 1507 aa28.23■■■□□ 2.11
CYB561A3-217ENST00000542361 NACADO15069 1562 aa28.23■■■□□ 2.11
CYB561A3-217ENST00000542361 MYO15BQ96JP2 1530 aa28.2■■■□□ 2.1
CYB561A3-217ENST00000542361 DCAF8L2P0C7V8 631 aa28.19■■■□□ 2.1
CYB561A3-217ENST00000542361 RB1CC1Q8TDY2 1594 aa28.16■■■□□ 2.1
CYB561A3-217ENST00000542361 SCRIBQ14160 1630 aa27.55■■■□□ 2
CYB561A3-217ENST00000542361 UNC13AQ9UPW8 1703 aa27.53■■■□□ 2
CYB561A3-217ENST00000542361 BICRAQ9NZM4 1560 aa27.28■■□□□ 1.96
CYB561A3-217ENST00000542361 PABPN1Q86U42 306 aaKnown RBP eCLIP27.16■■□□□ 1.94
CYB561A3-217ENST00000542361 SHROOM4Q9ULL8 1493 aa27.14■■□□□ 1.94
CYB561A3-217ENST00000542361 EIF4G1Q04637 1599 aaKnown RBP26.54■■□□□ 1.84
CYB561A3-217ENST00000542361 CECR2Q9BXF3 1484 aa26.48■■□□□ 1.83
CYB561A3-217ENST00000542361 BAZ1AQ9NRL2 1556 aaPredicted RBP26.41■■□□□ 1.82
CYB561A3-217ENST00000542361 SMARCA4P51532 1647 aa26.38■■□□□ 1.81
CYB561A3-217ENST00000542361 CC2D2AQ9P2K1 1620 aa26.32■■□□□ 1.8
CYB561A3-217ENST00000542361 MROH2BQ7Z745 1585 aa26.27■■□□□ 1.8
CYB561A3-217ENST00000542361 DNAJC5BQ9UF47 199 aa26.18■■□□□ 1.78
CYB561A3-217ENST00000542361 SMARCA2P51531 1590 aa26.12■■□□□ 1.77
CYB561A3-217ENST00000542361 PEG3Q9GZU2 1588 aa26.12■■□□□ 1.77
CYB561A3-217ENST00000542361 RSF1Q96T23 1441 aaPredicted RBP26.1■■□□□ 1.77
CYB561A3-217ENST00000542361 ATAD2BQ9ULI0 1458 aa26.1■■□□□ 1.77
CYB561A3-217ENST00000542361 WIZO95785 1651 aa26.02■■□□□ 1.76
CYB561A3-217ENST00000542361 NCAPD3P42695 1498 aa26■■□□□ 1.75
CYB561A3-217ENST00000542361 HMGXB3Q12766 1538 aa25.98■■□□□ 1.75
CYB561A3-217ENST00000542361 BAZ1BQ9UIG0 1483 aaKnown RBP25.93■■□□□ 1.74
CYB561A3-217ENST00000542361 TOP2AP11388 1531 aaKnown RBP25.79■■□□□ 1.72
CYB561A3-217ENST00000542361 SUPT5HO00267 1087 aaKnown RBP25.7■■□□□ 1.7
CYB561A3-217ENST00000542361 CCDC88BA6NC98 1476 aa25.43■■□□□ 1.66
CYB561A3-217ENST00000542361 LAMC3Q9Y6N6 1575 aa25.3■■□□□ 1.64
CYB561A3-217ENST00000542361 NESP48681 1621 aa25.26■■□□□ 1.63
CYB561A3-217ENST00000542361 CADPSQ9ULU8 1353 aa25.26■■□□□ 1.63
CYB561A3-217ENST00000542361 CFTRP13569 1480 aa25.22■■□□□ 1.63
CYB561A3-217ENST00000542361 PRDM2Q13029 1718 aa25.13■■□□□ 1.61
CYB561A3-217ENST00000542361 PDS5BQ9NTI5 1447 aa25.07■■□□□ 1.6
CYB561A3-217ENST00000542361 ERCC6Q03468 1493 aa25.03■■□□□ 1.6
CYB561A3-217ENST00000542361 KIF21AQ7Z4S6 1674 aa25.02■■□□□ 1.6
CYB561A3-217ENST00000542361 FANCD2Q9BXW9 1451 aa25.01■■□□□ 1.59
CYB561A3-217ENST00000542361 CEP164Q9UPV0 1460 aa24.96■■□□□ 1.59
CYB561A3-217ENST00000542361 THOC2Q8NI27 1593 aaKnown RBP24.84■■□□□ 1.57
CYB561A3-217ENST00000542361 MRC2Q9UBG0 1479 aa24.83■■□□□ 1.56
CYB561A3-217ENST00000542361 WDR62O43379 1518 aa24.75■■□□□ 1.55
CYB561A3-217ENST00000542361 URB2Q14146 1524 aaKnown RBP24.73■■□□□ 1.55
CYB561A3-217ENST00000542361 DNMBPQ6XZF7 1577 aa24.69■■□□□ 1.54
CYB561A3-217ENST00000542361 ABCC8Q09428 1581 aa24.67■■□□□ 1.54
CYB561A3-217ENST00000542361 TOPBP1Q92547 1522 aa24.66■■□□□ 1.54
CYB561A3-217ENST00000542361 CUX1P39880 1505 aa24.63■■□□□ 1.53
CYB561A3-217ENST00000542361 WRNQ14191 1432 aaPredicted RBP eCLIP24.62■■□□□ 1.53
CYB561A3-217ENST00000542361 CUX2O14529 1486 aa24.62■■□□□ 1.53
CYB561A3-217ENST00000542361 SYNJ1O43426 1573 aa24.56■■□□□ 1.52
CYB561A3-217ENST00000542361 BIVM-ERCC5R4GMW8 1640 aa24.55■■□□□ 1.52
CYB561A3-217ENST00000542361 TOP2BQ02880 1626 aa24.54■■□□□ 1.52
CYB561A3-217ENST00000542361 POLA1P09884 1462 aaPredicted RBP24.48■■□□□ 1.51
CYB561A3-217ENST00000542361 FGD5Q6ZNL6 1462 aa24.48■■□□□ 1.51
CYB561A3-217ENST00000542361 IFT140Q96RY7 1462 aa24.39■■□□□ 1.5
CYB561A3-217ENST00000542361 TARBP1Q13395 1621 aaKnown RBP24.36■■□□□ 1.49
CYB561A3-217ENST00000542361 SOGA1O94964 1423 aa24.34■■□□□ 1.49
CYB561A3-217ENST00000542361 RAD54L2Q9Y4B4 1467 aa24.33■■□□□ 1.49
CYB561A3-217ENST00000542361 WDR97A6NE52 1622 aa24.31■■□□□ 1.48
CYB561A3-217ENST00000542361 ABCA10Q8WWZ4 1543 aa24.26■■□□□ 1.47
CYB561A3-217ENST00000542361 TRIM41Q8WV44 630 aa24.26■■□□□ 1.47
CYB561A3-217ENST00000542361 ZNF608Q9ULD9 1512 aaPredicted RBP24.24■■□□□ 1.47
CYB561A3-217ENST00000542361 EIF4G3O43432 1585 aaKnown RBP24.22■■□□□ 1.47
CYB561A3-217ENST00000542361 CHIC1Q5VXU3 224 aa24.22■■□□□ 1.47
CYB561A3-217ENST00000542361 ABCA5Q8WWZ7 1642 aa24.17■■□□□ 1.46
CYB561A3-217ENST00000542361 TDRD9Q8NDG6 1382 aaKnown RBP24.15■■□□□ 1.46
CYB561A3-217ENST00000542361 AQRO60306 1485 aaKnown RBP eCLIP24.13■■□□□ 1.45
CYB561A3-217ENST00000542361 GAPVD1Q14C86 1478 aa24.09■■□□□ 1.45
CYB561A3-217ENST00000542361 PBRM1Q86U86 1689 aa24.08■■□□□ 1.44
CYB561A3-217ENST00000542361 KIF27Q86VH2 1401 aa24.06■■□□□ 1.44
CYB561A3-217ENST00000542361 GRIN2BQ13224 1484 aa24.04■■□□□ 1.44
CYB561A3-217ENST00000542361 ERICH3Q5RHP9 1530 aa24■■□□□ 1.43
CYB561A3-217ENST00000542361 SNAPC4Q5SXM2 1469 aa23.97■■□□□ 1.43
CYB561A3-217ENST00000542361 MAGI1Q96QZ7 1491 aaPredicted RBP23.95■■□□□ 1.42
CYB561A3-217ENST00000542361 RUSC2Q8N2Y8 1516 aa23.94■■□□□ 1.42
CYB561A3-217ENST00000542361 ADAMTS12P58397 1594 aa23.91■■□□□ 1.42
CYB561A3-217ENST00000542361 EEA1Q15075 1411 aa23.9■■□□□ 1.42
CYB561A3-217ENST00000542361 CUL7Q14999 1698 aa23.89■■□□□ 1.41
CYB561A3-217ENST00000542361 IGF1RP08069 1367 aa23.87■■□□□ 1.41
CYB561A3-217ENST00000542361 SYNJ2O15056 1496 aa23.85■■□□□ 1.41
CYB561A3-217ENST00000542361 FHAD1B1AJZ9 1412 aa23.84■■□□□ 1.41
CYB561A3-217ENST00000542361 CHD1O14646 1710 aa23.81■■□□□ 1.4
CYB561A3-217ENST00000542361 CARMIL1Q5VZK9 1371 aa23.75■■□□□ 1.39
CYB561A3-217ENST00000542361 GRIN2AQ12879 1464 aa23.75■■□□□ 1.39
CYB561A3-217ENST00000542361 FAM9AQ8IZU1 332 aaPredicted RBP23.74■■□□□ 1.39
CYB561A3-217ENST00000542361 CHMP7Q8WUX9 453 aaPredicted RBP23.73■■□□□ 1.39
CYB561A3-217ENST00000542361 FBLN2P98095 1184 aa23.72■■□□□ 1.39
CYB561A3-217ENST00000542361 CSRNP3Q8WYN3 585 aa23.72■■□□□ 1.39
CYB561A3-217ENST00000542361 PRXQ9BXM0 1461 aa23.71■■□□□ 1.39
CYB561A3-217ENST00000542361 RAPGEF2Q9Y4G8 1499 aa23.68■■□□□ 1.38
CYB561A3-217ENST00000542361 KIF21BO75037 1637 aa23.65■■□□□ 1.38
CYB561A3-217ENST00000542361 CEP170Q5SW79 1584 aa23.62■■□□□ 1.37
CYB561A3-217ENST00000542361 NUP160Q12769 1436 aa23.61■■□□□ 1.37
CYB561A3-217ENST00000542361 OSCARQ8IYS5 282 aa23.58■■□□□ 1.37
CYB561A3-217ENST00000542361 CLASP1Q7Z460 1538 aa23.57■■□□□ 1.36
CYB561A3-217ENST00000542361 GOLGA3Q08378 1498 aa23.53■■□□□ 1.36
CYB561A3-217ENST00000542361 CTTNBP2Q8WZ74 1663 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 214.1 ms