RNA–Protein interactions for RNA: ENST00000542287.6

ATXN2-215, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN2, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-215ENST00000542287 SF3B1O75533 1304 aaKnown RBP eCLIP5.99□□□□□ -1.453e-6■■■■■ 94.5
ATXN2-215ENST00000542287 AARSP49588 968 aaKnown RBP eCLIP6.25□□□□□ -1.413e-6■■■■■ 61.8
ATXN2-215ENST00000542287 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.29□□□□□ -1.42e-7■■■■■ 61.3
ATXN2-215ENST00000542287 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.15□□□□□ -1.423e-6■■■■■ 50.8
ATXN2-215ENST00000542287 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.66□□□□□ -1.53e-6■■■■■ 48.4
ATXN2-215ENST00000542287 DDX6P26196 483 aaKnown RBP eCLIP5.89□□□□□ -1.471e-6■■■■■ 46.6
ATXN2-215ENST00000542287 RBM22Q9NW64 420 aaKnown RBP eCLIP5.86□□□□□ -1.476e-11■■■■■ 45.7
ATXN2-215ENST00000542287 TARDBPQ13148 414 aaKnown RBP eCLIP5.42□□□□□ -1.541e-6■■■■■ 42.4
ATXN2-215ENST00000542287 MATR3P43243 847 aaKnown RBP eCLIP6.31□□□□□ -1.41e-10■■■■■ 41.7
ATXN2-215ENST00000542287 PTBP1P26599 531 aaKnown RBP eCLIP5.2□□□□□ -1.582e-7■■■■■ 33.2
ATXN2-215ENST00000542287 PCBP2Q15366 365 aaKnown RBP eCLIP5.67□□□□□ -1.54e-8■■■■■ 31.2
ATXN2-215ENST00000542287 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5□□□□□ -1.616e-7■■■■■ 29.1
ATXN2-215ENST00000542287 AQRO60306 1485 aaKnown RBP eCLIP9.47□□□□□ -0.891e-6■■■■■ 28.2
ATXN2-215ENST00000542287 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.87□□□□□ -1.471e-7■■■■■ 26.9
ATXN2-215ENST00000542287 QKIQ96PU8 341 aaKnown RBP eCLIP5.96□□□□□ -1.468e-7■■■■□ 25.6
ATXN2-215ENST00000542287 HNRNPLP14866 589 aaKnown RBP eCLIP5.81□□□□□ -1.484e-8■■■■□ 25.4
ATXN2-215ENST00000542287 SUB1P53999 127 aaKnown RBP eCLIP4.59□□□□□ -1.688e-7■■■■□ 25.4
ATXN2-215ENST00000542287 SF3B4Q15427 424 aaKnown RBP eCLIP5.58□□□□□ -1.524e-7■■■■□ 24
ATXN2-215ENST00000542287 RBFOX2O43251 390 aaKnown RBP eCLIP4.72□□□□□ -1.653e-7■■■■□ 24
ATXN2-215ENST00000542287 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.52□□□□□ -1.696e-7■■■■□ 23.3
ATXN2-215ENST00000542287 NONOQ15233 471 aaKnown RBP eCLIP6.51□□□□□ -1.376e-8■■■■□ 23
ATXN2-215ENST00000542287 NCBP2P52298 156 aaKnown RBP eCLIP5.45□□□□□ -1.542e-6■■■■□ 22.6
ATXN2-215ENST00000542287 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.84□□□□□ -1.472e-7■■■■□ 22.2
ATXN2-215ENST00000542287 HNRNPCP07910 306 aaKnown RBP eCLIP5.76□□□□□ -1.491e-6■■■■□ 22
ATXN2-215ENST00000542287 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.35□□□□□ -1.394e-13■■■■□ 22
ATXN2-215ENST00000542287 EIF4G2P78344 907 aaKnown RBP eCLIP8.12□□□□□ -1.113e-9■■■■□ 21.5
ATXN2-215ENST00000542287 GTF2F1P35269 517 aaKnown RBP eCLIP6.6□□□□□ -1.359e-7■■■■□ 20.5
ATXN2-215ENST00000542287 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.75□□□□□ -1.336e-7■■■■□ 19.3
ATXN2-215ENST00000542287 CSTF2P33240 577 aaKnown RBP eCLIP5.4□□□□□ -1.551e-6■■■□□ 18.7
ATXN2-215ENST00000542287 EWSR1Q01844 656 aaKnown RBP eCLIP4.87□□□□□ -1.633e-7■■■□□ 18.2
ATXN2-215ENST00000542287 KHSRPQ92945 711 aaKnown RBP eCLIP6.05□□□□□ -1.444e-7■■■□□ 17.8
ATXN2-215ENST00000542287 ILF3Q12906 894 aaKnown RBP eCLIP5.45□□□□□ -1.549e-7■■■□□ 17.6
ATXN2-215ENST00000542287 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.64□□□□□ -1.036e-7■■■□□ 17.1
ATXN2-215ENST00000542287 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.82□□□□□ -12e-7■■■□□ 16.3
ATXN2-215ENST00000542287 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.33□□□□□ -1.564e-7■■■□□ 16.3
ATXN2-215ENST00000542287 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.04□□□□□ -1.441e-6■■■□□ 16.3
ATXN2-215ENST00000542287 EIF3HO15372 352 aaKnown RBP eCLIP6.15□□□□□ -1.421e-6■■■□□ 15.9
ATXN2-215ENST00000542287 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.78□□□□□ -1.322e-6■■■□□ 15.9
ATXN2-215ENST00000542287 U2AF2P26368 475 aaKnown RBP eCLIP6.68□□□□□ -1.343e-6■■■□□ 15.8
ATXN2-215ENST00000542287 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.47□□□□□ -1.212e-7■■■□□ 15.2
ATXN2-215ENST00000542287 HNRNPKP61978 463 aaKnown RBP eCLIP5.49□□□□□ -1.536e-8■■■□□ 14.9
ATXN2-215ENST00000542287 HNRNPMP52272 730 aaKnown RBP eCLIP8.52□□□□□ -1.041e-6■■□□□ 14.5
ATXN2-215ENST00000542287 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.66□□□□□ -1.344e-7■■□□□ 14.3
ATXN2-215ENST00000542287 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.69□□□□□ -1.347e-7■■□□□ 13.8
ATXN2-215ENST00000542287 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.79□□□□□ -1.481e-7■■□□□ 13.6
ATXN2-215ENST00000542287 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.54□□□□□ -1.523e-8■■□□□ 13.6
ATXN2-215ENST00000542287 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.24□□□□□ -1.093e-7■■□□□ 13.5
ATXN2-215ENST00000542287 RBM5P52756 815 aaKnown RBP eCLIP6.67□□□□□ -1.341e-6■■□□□ 13.4
ATXN2-215ENST00000542287 FUSP35637 526 aaKnown RBP eCLIP3.71□□□□□ -1.822e-6■■□□□ 13.2
ATXN2-215ENST00000542287 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.23□□□□□ -1.414e-9■■□□□ 12.6
ATXN2-215ENST00000542287 ZNF622Q969S3 477 aaKnown RBP eCLIP6.94□□□□□ -1.32e-7■■□□□ 12.6
ATXN2-215ENST00000542287 EFTUD2Q15029 972 aaKnown RBP eCLIP6.04□□□□□ -1.442e-6■■□□□ 12.5
ATXN2-215ENST00000542287 PRPF4O43172 522 aaKnown RBP eCLIP5.99□□□□□ -1.456e-9■■□□□ 12.3
ATXN2-215ENST00000542287 DKC1O60832 514 aaKnown RBP eCLIP6.26□□□□□ -1.411e-6■■□□□ 12.2
ATXN2-215ENST00000542287 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.47□□□□□ -1.371e-6■■□□□ 12.1
ATXN2-215ENST00000542287 SRSF1Q07955 248 aaKnown RBP eCLIP4.95□□□□□ -1.626e-6■■□□□ 12.1
ATXN2-215ENST00000542287 AGGF1Q8N302 714 aaeCLIP6.03□□□□□ -1.444e-6■■□□□ 11.8
ATXN2-215ENST00000542287 NKRFO15226 690 aaKnown RBP eCLIP6.51□□□□□ -1.375e-7■■□□□ 11.6
ATXN2-215ENST00000542287 RBM15Q96T37 977 aaKnown RBP eCLIP6.06□□□□□ -1.445e-6■■□□□ 11.5
ATXN2-215ENST00000542287 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.14□□□□□ -1.433e-8■■□□□ 11.4
ATXN2-215ENST00000542287 PUM1Q14671 1186 aaKnown RBP eCLIP5.48□□□□□ -1.533e-7■■□□□ 11.4
ATXN2-215ENST00000542287 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6□□□□□ -1.453e-7■□□□□ 11
ATXN2-215ENST00000542287 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.97□□□□□ -1.457e-10■□□□□ 10.9
ATXN2-215ENST00000542287 PCBP1Q15365 356 aaKnown RBP eCLIP6.19□□□□□ -1.425e-9■□□□□ 10.7
ATXN2-215ENST00000542287 CDC40O60508 579 aaKnown RBP eCLIP5.22□□□□□ -1.574e-7■□□□□ 10.6
ATXN2-215ENST00000542287 SFPQP23246 707 aaKnown RBP eCLIP6.56□□□□□ -1.361e-6■□□□□ 10.6
ATXN2-215ENST00000542287 XRCC6P12956 609 aaKnown RBP eCLIP7.01□□□□□ -1.292e-6■□□□□ 10.4
ATXN2-215ENST00000542287 FXR2P51116 673 aaKnown RBP eCLIP6.46□□□□□ -1.387e-7■□□□□ 9.9
ATXN2-215ENST00000542287 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.46□□□□□ -1.543e-6■□□□□ 9.6
ATXN2-215ENST00000542287 TIA1P31483 386 aaKnown RBP eCLIP5.54□□□□□ -1.524e-9■□□□□ 9
ATXN2-215ENST00000542287 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.32□□□□□ -1.44e-6■□□□□ 8.1
Retrieved 71 of 71 RNA–protein pairs in 256.3 ms