RNA–Protein interactions for RNA: ENST00000542150.5

COPS7A-213, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-213ENST00000542150 NISCHQ9Y2I1 1504 aa30.84■■■□□ 2.53
COPS7A-213ENST00000542150 ABCC9O60706 1549 aa27.83■■■□□ 2.05
COPS7A-213ENST00000542150 CCDC180Q9P1Z9 1646 aa27.63■■■□□ 2.01
COPS7A-213ENST00000542150 RB1CC1Q8TDY2 1594 aa26.4■■□□□ 1.82
COPS7A-213ENST00000542150 DNAJC5BQ9UF47 199 aa26.37■■□□□ 1.81
COPS7A-213ENST00000542150 NACADO15069 1562 aa26.23■■□□□ 1.79
COPS7A-213ENST00000542150 DCAF8L2P0C7V8 631 aa26.02■■□□□ 1.76
COPS7A-213ENST00000542150 PABPN1Q86U42 306 aaKnown RBP eCLIP25.94■■□□□ 1.74
COPS7A-213ENST00000542150 MYO15BQ96JP2 1530 aa25.89■■□□□ 1.74
COPS7A-213ENST00000542150 UNC13AQ9UPW8 1703 aa25.72■■□□□ 1.71
COPS7A-213ENST00000542150 BICRAQ9NZM4 1560 aa25.71■■□□□ 1.71
COPS7A-213ENST00000542150 ZCCHC6Q5VYS8 1495 aaKnown RBP25.53■■□□□ 1.68
COPS7A-213ENST00000542150 DCAF1Q9Y4B6 1507 aa25.49■■□□□ 1.67
COPS7A-213ENST00000542150 SHROOM4Q9ULL8 1493 aa25.34■■□□□ 1.65
COPS7A-213ENST00000542150 SCRIBQ14160 1630 aa25.16■■□□□ 1.62
COPS7A-213ENST00000542150 CC2D2AQ9P2K1 1620 aa25.12■■□□□ 1.61
COPS7A-213ENST00000542150 CECR2Q9BXF3 1484 aa25.1■■□□□ 1.61
COPS7A-213ENST00000542150 EIF4G1Q04637 1599 aaKnown RBP25.05■■□□□ 1.6
COPS7A-213ENST00000542150 DNAJC5Q9H3Z4 198 aa24.29■■□□□ 1.48
COPS7A-213ENST00000542150 NCAPD3P42695 1498 aa24.29■■□□□ 1.48
COPS7A-213ENST00000542150 ATAD2BQ9ULI0 1458 aa24.17■■□□□ 1.46
COPS7A-213ENST00000542150 CUX2O14529 1486 aa24.07■■□□□ 1.44
COPS7A-213ENST00000542150 SMARCA4P51532 1647 aa24.03■■□□□ 1.44
COPS7A-213ENST00000542150 SMARCA2P51531 1590 aa24.03■■□□□ 1.44
COPS7A-213ENST00000542150 HMGXB3Q12766 1538 aa24.02■■□□□ 1.44
COPS7A-213ENST00000542150 ERCC6Q03468 1493 aa23.99■■□□□ 1.43
COPS7A-213ENST00000542150 BAZ1AQ9NRL2 1556 aaPredicted RBP23.91■■□□□ 1.42
COPS7A-213ENST00000542150 NESP48681 1621 aa23.89■■□□□ 1.42
COPS7A-213ENST00000542150 PEG3Q9GZU2 1588 aa23.86■■□□□ 1.41
COPS7A-213ENST00000542150 BAZ1BQ9UIG0 1483 aaKnown RBP23.85■■□□□ 1.41
COPS7A-213ENST00000542150 MROH2BQ7Z745 1585 aa23.76■■□□□ 1.39
COPS7A-213ENST00000542150 LAMC3Q9Y6N6 1575 aa23.66■■□□□ 1.38
COPS7A-213ENST00000542150 THOC2Q8NI27 1593 aaKnown RBP23.64■■□□□ 1.37
COPS7A-213ENST00000542150 PDS5BQ9NTI5 1447 aa23.57■■□□□ 1.36
COPS7A-213ENST00000542150 CADPSQ9ULU8 1353 aa23.52■■□□□ 1.36
COPS7A-213ENST00000542150 KIF21AQ7Z4S6 1674 aa23.47■■□□□ 1.35
COPS7A-213ENST00000542150 WIZO95785 1651 aa23.4■■□□□ 1.34
COPS7A-213ENST00000542150 MRC2Q9UBG0 1479 aa23.36■■□□□ 1.33
COPS7A-213ENST00000542150 WDR62O43379 1518 aa23.32■■□□□ 1.32
COPS7A-213ENST00000542150 RSF1Q96T23 1441 aaPredicted RBP23.25■■□□□ 1.31
COPS7A-213ENST00000542150 CFTRP13569 1480 aa23.23■■□□□ 1.31
COPS7A-213ENST00000542150 CEP164Q9UPV0 1460 aa23.22■■□□□ 1.31
COPS7A-213ENST00000542150 FANCD2Q9BXW9 1451 aa23.21■■□□□ 1.31
COPS7A-213ENST00000542150 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
COPS7A-213ENST00000542150 URB2Q14146 1524 aaKnown RBP23.05■■□□□ 1.28
COPS7A-213ENST00000542150 TRIM41Q8WV44 630 aa23.04■■□□□ 1.28
COPS7A-213ENST00000542150 OSCARQ8IYS5 282 aa22.97■■□□□ 1.27
COPS7A-213ENST00000542150 CCDC88BA6NC98 1476 aa22.92■■□□□ 1.26
COPS7A-213ENST00000542150 IFT140Q96RY7 1462 aa22.79■■□□□ 1.24
COPS7A-213ENST00000542150 ZNF608Q9ULD9 1512 aaPredicted RBP22.79■■□□□ 1.24
COPS7A-213ENST00000542150 PRDM2Q13029 1718 aa22.77■■□□□ 1.24
COPS7A-213ENST00000542150 TOPBP1Q92547 1522 aa22.76■■□□□ 1.23
COPS7A-213ENST00000542150 ABCC8Q09428 1581 aa22.69■■□□□ 1.22
COPS7A-213ENST00000542150 DNMBPQ6XZF7 1577 aa22.63■■□□□ 1.21
COPS7A-213ENST00000542150 RIMBP3CA6NJZ7 1639 aa22.6■■□□□ 1.21
COPS7A-213ENST00000542150 RIMBP3BA6NNM3 1639 aa22.6■■□□□ 1.21
COPS7A-213ENST00000542150 RIMBP3Q9UFD9 1639 aa22.6■■□□□ 1.21
COPS7A-213ENST00000542150 AQRO60306 1485 aaKnown RBP eCLIP22.57■■□□□ 1.2
COPS7A-213ENST00000542150 EIF4G3O43432 1585 aaKnown RBP22.57■■□□□ 1.2
COPS7A-213ENST00000542150 TARBP1Q13395 1621 aaKnown RBP22.57■■□□□ 1.2
COPS7A-213ENST00000542150 ARHGEF11O15085 1522 aa22.56■■□□□ 1.2
COPS7A-213ENST00000542150 POLA1P09884 1462 aaPredicted RBP22.54■■□□□ 1.2
COPS7A-213ENST00000542150 RAD54L2Q9Y4B4 1467 aa22.45■■□□□ 1.18
COPS7A-213ENST00000542150 SOGA1O94964 1423 aa22.43■■□□□ 1.18
COPS7A-213ENST00000542150 CYB5RLQ6IPT4 315 aa22.43■■□□□ 1.18
COPS7A-213ENST00000542150 TDRD9Q8NDG6 1382 aaKnown RBP22.4■■□□□ 1.18
COPS7A-213ENST00000542150 FBLN2P98095 1184 aa22.38■■□□□ 1.17
COPS7A-213ENST00000542150 CHD1O14646 1710 aa22.37■■□□□ 1.17
COPS7A-213ENST00000542150 ARAP1Q96P48 1450 aa22.35■■□□□ 1.17
COPS7A-213ENST00000542150 FGD5Q6ZNL6 1462 aa22.34■■□□□ 1.17
COPS7A-213ENST00000542150 CUX1P39880 1505 aa22.32■■□□□ 1.16
COPS7A-213ENST00000542150 WDR97A6NE52 1622 aa22.3■■□□□ 1.16
COPS7A-213ENST00000542150 SNAPC4Q5SXM2 1469 aa22.29■■□□□ 1.16
COPS7A-213ENST00000542150 MAGI1Q96QZ7 1491 aaPredicted RBP22.24■■□□□ 1.15
COPS7A-213ENST00000542150 CLASP1Q7Z460 1538 aa22.24■■□□□ 1.15
COPS7A-213ENST00000542150 GRIN2BQ13224 1484 aa22.23■■□□□ 1.15
COPS7A-213ENST00000542150 CHMP7Q8WUX9 453 aaPredicted RBP22.23■■□□□ 1.15
COPS7A-213ENST00000542150 SYNJ2O15056 1496 aa22.17■■□□□ 1.14
COPS7A-213ENST00000542150 TRHP20396 242 aaPredicted RBP22.15■■□□□ 1.14
COPS7A-213ENST00000542150 SYNJ1O43426 1573 aa22.15■■□□□ 1.14
COPS7A-213ENST00000542150 GAPVD1Q14C86 1478 aa22.13■■□□□ 1.13
COPS7A-213ENST00000542150 ABCA10Q8WWZ4 1543 aa22.11■■□□□ 1.13
COPS7A-213ENST00000542150 ABCA5Q8WWZ7 1642 aa22.05■■□□□ 1.12
COPS7A-213ENST00000542150 SUPT5HO00267 1087 aaKnown RBP22.04■■□□□ 1.12
COPS7A-213ENST00000542150 PBRM1Q86U86 1689 aa22.01■■□□□ 1.11
COPS7A-213ENST00000542150 WRNQ14191 1432 aaPredicted RBP eCLIP21.98■■□□□ 1.11
COPS7A-213ENST00000542150 GRIN2AQ12879 1464 aa21.95■■□□□ 1.1
COPS7A-213ENST00000542150 NUP160Q12769 1436 aa21.92■■□□□ 1.1
COPS7A-213ENST00000542150 TOP2BQ02880 1626 aa21.89■■□□□ 1.09
COPS7A-213ENST00000542150 ERCC6L2Q5T890 1561 aa21.88■■□□□ 1.09
COPS7A-213ENST00000542150 ADAMTS12P58397 1594 aa21.87■■□□□ 1.09
COPS7A-213ENST00000542150 FHAD1B1AJZ9 1412 aa21.87■■□□□ 1.09
COPS7A-213ENST00000542150 BIVM-ERCC5R4GMW8 1640 aa21.87■■□□□ 1.09
COPS7A-213ENST00000542150 CEP170Q5SW79 1584 aa21.87■■□□□ 1.09
COPS7A-213ENST00000542150 ERICH3Q5RHP9 1530 aa21.8■■□□□ 1.08
COPS7A-213ENST00000542150 SHROOM2Q13796 1616 aa21.78■■□□□ 1.08
COPS7A-213ENST00000542150 JPH4Q96JJ6 628 aa21.7■■□□□ 1.06
COPS7A-213ENST00000542150 PRG4Q92954 1404 aaPredicted RBP21.69■■□□□ 1.06
COPS7A-213ENST00000542150 AEBP2Q6ZN18 517 aaPredicted RBP21.58■■□□□ 1.05
COPS7A-213ENST00000542150 IGF1RP08069 1367 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms