RNA–Protein interactions for RNA: ENST00000542099.5

ARL6IP4-219, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, humanhuman

TSL 3

Gene ARL6IP4, Length 1,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARL6IP4-219ENST00000542099 NISCHQ9Y2I1 1504 aa58.44■■■■■ 6.95
ARL6IP4-219ENST00000542099 ABCC9O60706 1549 aa52.6■■■■■ 6.01
ARL6IP4-219ENST00000542099 CCDC180Q9P1Z9 1646 aa52.51■■■■■ 6
ARL6IP4-219ENST00000542099 RB1CC1Q8TDY2 1594 aa50.09■■■■■ 5.61
ARL6IP4-219ENST00000542099 NACADO15069 1562 aa49.75■■■■■ 5.55
ARL6IP4-219ENST00000542099 DNAJC5BQ9UF47 199 aa49.47■■■■■ 5.51
ARL6IP4-219ENST00000542099 DCAF8L2P0C7V8 631 aa49.42■■■■■ 5.5
ARL6IP4-219ENST00000542099 MYO15BQ96JP2 1530 aa49.07■■■■■ 5.45
ARL6IP4-219ENST00000542099 PABPN1Q86U42 306 aaKnown RBP eCLIP48.97■■■■■ 5.43
ARL6IP4-219ENST00000542099 UNC13AQ9UPW8 1703 aa48.79■■■■■ 5.4
ARL6IP4-219ENST00000542099 BICRAQ9NZM4 1560 aa48.53■■■■■ 5.36
ARL6IP4-219ENST00000542099 ZCCHC6Q5VYS8 1495 aaKnown RBP48.38■■■■■ 5.34
ARL6IP4-219ENST00000542099 DCAF1Q9Y4B6 1507 aa48.35■■■■■ 5.33
ARL6IP4-219ENST00000542099 SHROOM4Q9ULL8 1493 aa48.08■■■■■ 5.29
ARL6IP4-219ENST00000542099 SCRIBQ14160 1630 aa47.73■■■■■ 5.23
ARL6IP4-219ENST00000542099 CC2D2AQ9P2K1 1620 aa47.52■■■■■ 5.2
ARL6IP4-219ENST00000542099 CECR2Q9BXF3 1484 aa47.46■■■■■ 5.19
ARL6IP4-219ENST00000542099 EIF4G1Q04637 1599 aaKnown RBP47.41■■■■■ 5.18
ARL6IP4-219ENST00000542099 NCAPD3P42695 1498 aa45.93■■■■■ 4.94
ARL6IP4-219ENST00000542099 ATAD2BQ9ULI0 1458 aa45.71■■■■■ 4.91
ARL6IP4-219ENST00000542099 DNAJC5Q9H3Z4 198 aa45.69■■■■■ 4.9
ARL6IP4-219ENST00000542099 SMARCA2P51531 1590 aa45.63■■■■■ 4.9
ARL6IP4-219ENST00000542099 SMARCA4P51532 1647 aa45.58■■■■■ 4.89
ARL6IP4-219ENST00000542099 HMGXB3Q12766 1538 aa45.53■■■■■ 4.88
ARL6IP4-219ENST00000542099 CUX2O14529 1486 aa45.52■■■■■ 4.88
ARL6IP4-219ENST00000542099 ERCC6Q03468 1493 aa45.5■■■■■ 4.87
ARL6IP4-219ENST00000542099 BAZ1AQ9NRL2 1556 aaPredicted RBP45.41■■■■■ 4.86
ARL6IP4-219ENST00000542099 BAZ1BQ9UIG0 1483 aaKnown RBP45.27■■■■■ 4.84
ARL6IP4-219ENST00000542099 PEG3Q9GZU2 1588 aa45.2■■■■■ 4.83
ARL6IP4-219ENST00000542099 NESP48681 1621 aa45.1■■■■■ 4.81
ARL6IP4-219ENST00000542099 MROH2BQ7Z745 1585 aa44.96■■■■■ 4.79
ARL6IP4-219ENST00000542099 LAMC3Q9Y6N6 1575 aa44.9■■■■■ 4.78
ARL6IP4-219ENST00000542099 PDS5BQ9NTI5 1447 aa44.71■■■■■ 4.75
ARL6IP4-219ENST00000542099 THOC2Q8NI27 1593 aaKnown RBP44.69■■■■■ 4.74
ARL6IP4-219ENST00000542099 CADPSQ9ULU8 1353 aa44.53■■■■■ 4.72
ARL6IP4-219ENST00000542099 KIF21AQ7Z4S6 1674 aa44.5■■■■■ 4.71
ARL6IP4-219ENST00000542099 WIZO95785 1651 aa44.38■■■■■ 4.69
ARL6IP4-219ENST00000542099 MRC2Q9UBG0 1479 aa44.25■■■■■ 4.67
ARL6IP4-219ENST00000542099 WDR62O43379 1518 aa44.12■■■■■ 4.65
ARL6IP4-219ENST00000542099 CEP164Q9UPV0 1460 aa44.04■■■■■ 4.64
ARL6IP4-219ENST00000542099 RSF1Q96T23 1441 aaPredicted RBP44.04■■■■■ 4.64
ARL6IP4-219ENST00000542099 CFTRP13569 1480 aa43.96■■■■■ 4.63
ARL6IP4-219ENST00000542099 FANCD2Q9BXW9 1451 aa43.96■■■■■ 4.63
ARL6IP4-219ENST00000542099 TOP2AP11388 1531 aaKnown RBP43.89■■■■■ 4.62
ARL6IP4-219ENST00000542099 URB2Q14146 1524 aaKnown RBP43.56■■■■■ 4.56
ARL6IP4-219ENST00000542099 TRIM41Q8WV44 630 aa43.53■■■■■ 4.56
ARL6IP4-219ENST00000542099 OSCARQ8IYS5 282 aa43.48■■■■■ 4.55
ARL6IP4-219ENST00000542099 PRDM2Q13029 1718 aa43.42■■■■■ 4.54
ARL6IP4-219ENST00000542099 CCDC88BA6NC98 1476 aa43.39■■■■■ 4.54
ARL6IP4-219ENST00000542099 IFT140Q96RY7 1462 aa43.2■■■■■ 4.51
ARL6IP4-219ENST00000542099 ABCC8Q09428 1581 aa43.15■■■■■ 4.5
ARL6IP4-219ENST00000542099 TOPBP1Q92547 1522 aa43.1■■■■■ 4.49
ARL6IP4-219ENST00000542099 ZNF608Q9ULD9 1512 aaPredicted RBP43.03■■■■■ 4.48
ARL6IP4-219ENST00000542099 DNMBPQ6XZF7 1577 aa42.94■■■■■ 4.46
ARL6IP4-219ENST00000542099 EIF4G3O43432 1585 aaKnown RBP42.78■■■■■ 4.44
ARL6IP4-219ENST00000542099 RIMBP3CA6NJZ7 1639 aa42.75■■■■■ 4.43
ARL6IP4-219ENST00000542099 RIMBP3BA6NNM3 1639 aa42.75■■■■■ 4.43
ARL6IP4-219ENST00000542099 RIMBP3Q9UFD9 1639 aa42.75■■■■■ 4.43
ARL6IP4-219ENST00000542099 TARBP1Q13395 1621 aaKnown RBP42.7■■■■■ 4.43
ARL6IP4-219ENST00000542099 AQRO60306 1485 aaKnown RBP eCLIP42.67■■■■■ 4.425e-7■■■■■ 38.3
ARL6IP4-219ENST00000542099 POLA1P09884 1462 aaPredicted RBP42.64■■■■■ 4.42
ARL6IP4-219ENST00000542099 ARHGEF11O15085 1522 aa42.64■■■■■ 4.42
ARL6IP4-219ENST00000542099 SOGA1O94964 1423 aa42.51■■■■■ 4.4
ARL6IP4-219ENST00000542099 FBLN2P98095 1184 aa42.48■■■■■ 4.39
ARL6IP4-219ENST00000542099 CHD1O14646 1710 aa42.46■■■■■ 4.39
ARL6IP4-219ENST00000542099 RAD54L2Q9Y4B4 1467 aa42.45■■■■■ 4.39
ARL6IP4-219ENST00000542099 CYB5RLQ6IPT4 315 aa42.4■■■■■ 4.38
ARL6IP4-219ENST00000542099 TDRD9Q8NDG6 1382 aaKnown RBP42.39■■■■■ 4.38
ARL6IP4-219ENST00000542099 WDR97A6NE52 1622 aa42.38■■■■■ 4.38
ARL6IP4-219ENST00000542099 FGD5Q6ZNL6 1462 aa42.35■■■■■ 4.37
ARL6IP4-219ENST00000542099 CUX1P39880 1505 aa42.26■■■■■ 4.36
ARL6IP4-219ENST00000542099 SNAPC4Q5SXM2 1469 aa42.22■■■■■ 4.35
ARL6IP4-219ENST00000542099 CHMP7Q8WUX9 453 aaPredicted RBP42.2■■■■■ 4.35
ARL6IP4-219ENST00000542099 MAGI1Q96QZ7 1491 aaPredicted RBP42.19■■■■■ 4.34
ARL6IP4-219ENST00000542099 ARAP1Q96P48 1450 aa42.18■■■■■ 4.34
ARL6IP4-219ENST00000542099 GRIN2BQ13224 1484 aa42.17■■■■■ 4.34
ARL6IP4-219ENST00000542099 SYNJ1O43426 1573 aa42.07■■■■■ 4.33
ARL6IP4-219ENST00000542099 CLASP1Q7Z460 1538 aa42.04■■■■■ 4.32
ARL6IP4-219ENST00000542099 SYNJ2O15056 1496 aa42.04■■■■■ 4.32
ARL6IP4-219ENST00000542099 TRHP20396 242 aaPredicted RBP41.99■■■■■ 4.31
ARL6IP4-219ENST00000542099 GAPVD1Q14C86 1478 aa41.98■■■■■ 4.31
ARL6IP4-219ENST00000542099 SUPT5HO00267 1087 aaKnown RBP41.96■■■■■ 4.31
ARL6IP4-219ENST00000542099 ABCA10Q8WWZ4 1543 aa41.91■■■■■ 4.3
ARL6IP4-219ENST00000542099 PBRM1Q86U86 1689 aa41.85■■■■■ 4.29
ARL6IP4-219ENST00000542099 ABCA5Q8WWZ7 1642 aa41.79■■■■■ 4.28
ARL6IP4-219ENST00000542099 WRNQ14191 1432 aaPredicted RBP eCLIP41.77■■■■■ 4.28
ARL6IP4-219ENST00000542099 GRIN2AQ12879 1464 aa41.59■■■■■ 4.25
ARL6IP4-219ENST00000542099 TOP2BQ02880 1626 aa41.58■■■■■ 4.25
ARL6IP4-219ENST00000542099 BIVM-ERCC5R4GMW8 1640 aa41.55■■■■■ 4.24
ARL6IP4-219ENST00000542099 ADAMTS12P58397 1594 aa41.48■■■■■ 4.23
ARL6IP4-219ENST00000542099 FHAD1B1AJZ9 1412 aa41.47■■■■■ 4.23
ARL6IP4-219ENST00000542099 NUP160Q12769 1436 aa41.46■■■■■ 4.23
ARL6IP4-219ENST00000542099 ERICH3Q5RHP9 1530 aa41.4■■■■■ 4.22
ARL6IP4-219ENST00000542099 CEP170Q5SW79 1584 aa41.37■■■■■ 4.21
ARL6IP4-219ENST00000542099 ERCC6L2Q5T890 1561 aa41.28■■■■■ 4.2
ARL6IP4-219ENST00000542099 SHROOM2Q13796 1616 aa41.26■■■■■ 4.19
ARL6IP4-219ENST00000542099 JPH4Q96JJ6 628 aa41.11■■■■■ 4.17
ARL6IP4-219ENST00000542099 PRG4Q92954 1404 aaPredicted RBP41.08■■■■■ 4.17
ARL6IP4-219ENST00000542099 AEBP2Q6ZN18 517 aaPredicted RBP40.93■■■■■ 4.14
ARL6IP4-219ENST00000542099 RUSC2Q8N2Y8 1516 aa40.89■■■■■ 4.14
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms