RNA–Protein interactions for RNA: ENST00000541769.1

AC006065.3-201, humanhuman

TSL 5 BASIC

Gene AC006065.3, Length 419 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006065.3-201ENST00000541769 CHIC1Q5VXU3 224 aa13.22□□□□□ -0.29
AC006065.3-201ENST00000541769 AEBP2Q6ZN18 517 aaPredicted RBP12.97□□□□□ -0.33
AC006065.3-201ENST00000541769 PHF23Q9BUL5 403 aaPredicted RBP11.68□□□□□ -0.54
AC006065.3-201ENST00000541769 PLPPR3Q6T4P5 718 aa11.01□□□□□ -0.65
AC006065.3-201ENST00000541769 SENP3Q9H4L4 574 aaPredicted RBP10.94□□□□□ -0.66
AC006065.3-201ENST00000541769 NISCHQ9Y2I1 1504 aa10.93□□□□□ -0.66
AC006065.3-201ENST00000541769 ABCC9O60706 1549 aa10.49□□□□□ -0.73
AC006065.3-201ENST00000541769 DNAJC5BQ9UF47 199 aa10.33□□□□□ -0.76
AC006065.3-201ENST00000541769 ADRA2BP18089 450 aa10.3□□□□□ -0.76
AC006065.3-201ENST00000541769 EHMT2Q96KQ7 1210 aa10.26□□□□□ -0.77
AC006065.3-201ENST00000541769 KCNA4P22459 653 aa10.21□□□□□ -0.77
AC006065.3-201ENST00000541769 PPP6R1Q9UPN7 881 aa10.13□□□□□ -0.79
AC006065.3-201ENST00000541769 CCDC180Q9P1Z9 1646 aa10.12□□□□□ -0.79
AC006065.3-201ENST00000541769 FOXD1Q16676 465 aa10.08□□□□□ -0.8
AC006065.3-201ENST00000541769 POTEDQ86YR6 584 aa10.04□□□□□ -0.8
AC006065.3-201ENST00000541769 SLC4A1APQ9BWU0 796 aaKnown RBP9.85□□□□□ -0.83
AC006065.3-201ENST00000541769 DNAJC5Q9H3Z4 198 aa9.85□□□□□ -0.83
AC006065.3-201ENST00000541769 RB1CC1Q8TDY2 1594 aa9.81□□□□□ -0.84
AC006065.3-201ENST00000541769 CSRNP3Q8WYN3 585 aa9.8□□□□□ -0.84
AC006065.3-201ENST00000541769 PPP4R3CPQ6ZMV5 832 aa9.79□□□□□ -0.84
AC006065.3-201ENST00000541769 UNC13AQ9UPW8 1703 aa9.71□□□□□ -0.85
AC006065.3-201ENST00000541769 NCBP3Q53F19 620 aaKnown RBP9.71□□□□□ -0.86
AC006065.3-201ENST00000541769 PIAS4Q8N2W9 510 aaPredicted RBP9.69□□□□□ -0.86
AC006065.3-201ENST00000541769 NACADO15069 1562 aa9.63□□□□□ -0.87
AC006065.3-201ENST00000541769 BICRAQ9NZM4 1560 aa9.63□□□□□ -0.87
AC006065.3-201ENST00000541769 PABPN1Q86U42 306 aaKnown RBP eCLIP9.61□□□□□ -0.87
AC006065.3-201ENST00000541769 NPM3O75607 178 aaKnown RBP9.54□□□□□ -0.88
AC006065.3-201ENST00000541769 CC2D2AQ9P2K1 1620 aa9.53□□□□□ -0.88
AC006065.3-201ENST00000541769 CECR2Q9BXF3 1484 aa9.53□□□□□ -0.88
AC006065.3-201ENST00000541769 SHROOM4Q9ULL8 1493 aa9.43□□□□□ -0.9
AC006065.3-201ENST00000541769 EIF4G1Q04637 1599 aaKnown RBP9.38□□□□□ -0.91
AC006065.3-201ENST00000541769 ZBTB22O15209 634 aa9.38□□□□□ -0.91
AC006065.3-201ENST00000541769 CNKSR2Q8WXI2 1034 aa9.38□□□□□ -0.91
AC006065.3-201ENST00000541769 MYO15BQ96JP2 1530 aa9.37□□□□□ -0.91
AC006065.3-201ENST00000541769 CUX2O14529 1486 aa9.34□□□□□ -0.91
AC006065.3-201ENST00000541769 SCAF1Q9H7N4 1312 aaKnown RBP9.32□□□□□ -0.92
AC006065.3-201ENST00000541769 FOXD4L1Q9NU39 408 aa9.23□□□□□ -0.93
AC006065.3-201ENST00000541769 MSH5O43196 834 aa9.21□□□□□ -0.94
AC006065.3-201ENST00000541769 DCAF8L2P0C7V8 631 aa9.18□□□□□ -0.94
AC006065.3-201ENST00000541769 SLC24A1O60721 1099 aa9.14□□□□□ -0.95
AC006065.3-201ENST00000541769 SCRIBQ14160 1630 aa9.11□□□□□ -0.95
AC006065.3-201ENST00000541769 TRIM41Q8WV44 630 aa9.09□□□□□ -0.95
AC006065.3-201ENST00000541769 AMER1Q5JTC6 1135 aaPredicted RBP9.08□□□□□ -0.96
AC006065.3-201ENST00000541769 MAPK8IP2Q13387 824 aaPredicted RBP9.07□□□□□ -0.96
AC006065.3-201ENST00000541769 RTN4Q9NQC3 1192 aaKnown RBP9.07□□□□□ -0.96
AC006065.3-201ENST00000541769 ERCC6Q03468 1493 aa9.07□□□□□ -0.96
AC006065.3-201ENST00000541769 DCAF1Q9Y4B6 1507 aa9.05□□□□□ -0.96
AC006065.3-201ENST00000541769 RNF216Q9NWF9 866 aaPredicted RBP9.04□□□□□ -0.96
AC006065.3-201ENST00000541769 THOC2Q8NI27 1593 aaKnown RBP9.02□□□□□ -0.97
AC006065.3-201ENST00000541769 ZCCHC6Q5VYS8 1495 aaKnown RBP8.98□□□□□ -0.97
AC006065.3-201ENST00000541769 NESP48681 1621 aa8.91□□□□□ -0.98
AC006065.3-201ENST00000541769 FKBP8Q14318 412 aa8.88□□□□□ -0.99
AC006065.3-201ENST00000541769 NCAPD3P42695 1498 aa8.88□□□□□ -0.99
AC006065.3-201ENST00000541769 SLC4A2P04920 1241 aa8.85□□□□□ -0.99
AC006065.3-201ENST00000541769 KIF21AQ7Z4S6 1674 aa8.85□□□□□ -0.99
AC006065.3-201ENST00000541769 BAZ1AQ9NRL2 1556 aaPredicted RBP8.83□□□□□ -1
AC006065.3-201ENST00000541769 HOXD11P31277 338 aaPredicted RBP8.83□□□□□ -1
AC006065.3-201ENST00000541769 HMGXB3Q12766 1538 aa8.82□□□□□ -1
AC006065.3-201ENST00000541769 MYCNP04198 464 aaPredicted RBP8.82□□□□□ -1
AC006065.3-201ENST00000541769 ATXN8OSP0DMR3 200 aa8.82□□□□□ -1
AC006065.3-201ENST00000541769 SMARCA2P51531 1590 aa8.82□□□□□ -1
AC006065.3-201ENST00000541769 DMRT2Q9Y5R5 561 aa8.81□□□□□ -1
AC006065.3-201ENST00000541769 LAMC3Q9Y6N6 1575 aa8.78□□□□□ -1
AC006065.3-201ENST00000541769 RIMBP3CA6NJZ7 1639 aa8.78□□□□□ -1
AC006065.3-201ENST00000541769 RIMBP3BA6NNM3 1639 aa8.78□□□□□ -1
AC006065.3-201ENST00000541769 RIMBP3Q9UFD9 1639 aa8.78□□□□□ -1
AC006065.3-201ENST00000541769 ATAD2BQ9ULI0 1458 aa8.77□□□□□ -1
AC006065.3-201ENST00000541769 WDR62O43379 1518 aa8.74□□□□□ -1.01
AC006065.3-201ENST00000541769 MRC2Q9UBG0 1479 aa8.68□□□□□ -1.02
AC006065.3-201ENST00000541769 ARHGEF11O15085 1522 aa8.67□□□□□ -1.02
AC006065.3-201ENST00000541769 SMARCA4P51532 1647 aa8.67□□□□□ -1.02
AC006065.3-201ENST00000541769 OSCARQ8IYS5 282 aa8.67□□□□□ -1.02
AC006065.3-201ENST00000541769 PDS5BQ9NTI5 1447 aa8.67□□□□□ -1.02
AC006065.3-201ENST00000541769 PEG3Q9GZU2 1588 aa8.64□□□□□ -1.03
AC006065.3-201ENST00000541769 BAZ1BQ9UIG0 1483 aaKnown RBP8.63□□□□□ -1.03
AC006065.3-201ENST00000541769 ARAP1Q96P48 1450 aa8.56□□□□□ -1.04
AC006065.3-201ENST00000541769 CADPSQ9ULU8 1353 aa8.53□□□□□ -1.04
AC006065.3-201ENST00000541769 ATF5Q9Y2D1 282 aaPredicted RBP8.53□□□□□ -1.04
AC006065.3-201ENST00000541769 CEP164Q9UPV0 1460 aa8.51□□□□□ -1.05
AC006065.3-201ENST00000541769 DCAF8L1A6NGE4 600 aa8.51□□□□□ -1.05
AC006065.3-201ENST00000541769 TRHP20396 242 aaPredicted RBP8.51□□□□□ -1.05
AC006065.3-201ENST00000541769 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.5□□□□□ -1.05
AC006065.3-201ENST00000541769 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.48□□□□□ -1.05
AC006065.3-201ENST00000541769 HNRNPUL2Q1KMD3 747 aaKnown RBP8.48□□□□□ -1.05
AC006065.3-201ENST00000541769 CYB5RLQ6IPT4 315 aa8.48□□□□□ -1.05
AC006065.3-201ENST00000541769 ILDR1Q86SU0 546 aaPredicted RBP8.48□□□□□ -1.05
AC006065.3-201ENST00000541769 SAMD1Q6SPF0 538 aaPredicted RBP8.47□□□□□ -1.05
AC006065.3-201ENST00000541769 URB2Q14146 1524 aaKnown RBP8.47□□□□□ -1.05
AC006065.3-201ENST00000541769 CHD1O14646 1710 aa8.46□□□□□ -1.06
AC006065.3-201ENST00000541769 FANCD2Q9BXW9 1451 aa8.45□□□□□ -1.06
AC006065.3-201ENST00000541769 RSF1Q96T23 1441 aaPredicted RBP8.44□□□□□ -1.06
AC006065.3-201ENST00000541769 ZNF608Q9ULD9 1512 aaPredicted RBP8.43□□□□□ -1.06
AC006065.3-201ENST00000541769 MROH2BQ7Z745 1585 aa8.41□□□□□ -1.06
AC006065.3-201ENST00000541769 EIF4G3O43432 1585 aaKnown RBP8.4□□□□□ -1.06
AC006065.3-201ENST00000541769 FBXO3Q9UK99 471 aa8.39□□□□□ -1.07
AC006065.3-201ENST00000541769 U3KPZ7 1027 aaPredicted RBP8.38□□□□□ -1.07
AC006065.3-201ENST00000541769 CFTRP13569 1480 aa8.38□□□□□ -1.07
AC006065.3-201ENST00000541769 IFT140Q96RY7 1462 aa8.38□□□□□ -1.07
AC006065.3-201ENST00000541769 PRDM2Q13029 1718 aa8.36□□□□□ -1.07
AC006065.3-201ENST00000541769 CLASP1Q7Z460 1538 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms