RNA–Protein interactions for RNA: ENST00000541633.5

PPFIBP1-213, Transcript of PPFIA binding protein 1, humanhuman

TSL 4

Gene PPFIBP1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-213ENST00000541633 NISCHQ9Y2I1 1504 aa50.41■■■■■ 5.66
PPFIBP1-213ENST00000541633 CCDC180Q9P1Z9 1646 aa44.7■■■■■ 4.75
PPFIBP1-213ENST00000541633 ABCC9O60706 1549 aa43.43■■■■■ 4.54
PPFIBP1-213ENST00000541633 ZCCHC6Q5VYS8 1495 aaKnown RBP42.1■■■■■ 4.33
PPFIBP1-213ENST00000541633 DCAF8L2P0C7V8 631 aa41.9■■■■■ 4.3
PPFIBP1-213ENST00000541633 NACADO15069 1562 aa41.88■■■■■ 4.3
PPFIBP1-213ENST00000541633 RB1CC1Q8TDY2 1594 aa41.83■■■■■ 4.29
PPFIBP1-213ENST00000541633 MYO15BQ96JP2 1530 aa41.79■■■■■ 4.28
PPFIBP1-213ENST00000541633 DCAF1Q9Y4B6 1507 aa41.77■■■■■ 4.28
PPFIBP1-213ENST00000541633 UNC13AQ9UPW8 1703 aa40.87■■■■■ 4.13
PPFIBP1-213ENST00000541633 SCRIBQ14160 1630 aa40.76■■■■■ 4.12
PPFIBP1-213ENST00000541633 PABPN1Q86U42 306 aaKnown RBP eCLIP40.57■■■■■ 4.09
PPFIBP1-213ENST00000541633 BICRAQ9NZM4 1560 aa40.54■■■■■ 4.08
PPFIBP1-213ENST00000541633 SHROOM4Q9ULL8 1493 aa40.2■■■■■ 4.03
PPFIBP1-213ENST00000541633 DNAJC5BQ9UF47 199 aa39.79■■■■□ 3.96
PPFIBP1-213ENST00000541633 EIF4G1Q04637 1599 aaKnown RBP39.46■■■■□ 3.91
PPFIBP1-213ENST00000541633 CC2D2AQ9P2K1 1620 aa39.29■■■■□ 3.88
PPFIBP1-213ENST00000541633 CECR2Q9BXF3 1484 aa39.15■■■■□ 3.86
PPFIBP1-213ENST00000541633 BAZ1AQ9NRL2 1556 aaPredicted RBP39.08■■■■□ 3.85
PPFIBP1-213ENST00000541633 SMARCA4P51532 1647 aa39.04■■■■□ 3.84
PPFIBP1-213ENST00000541633 MROH2BQ7Z745 1585 aa38.82■■■■□ 3.81
PPFIBP1-213ENST00000541633 SMARCA2P51531 1590 aa38.73■■■■□ 3.79
PPFIBP1-213ENST00000541633 ATAD2BQ9ULI0 1458 aa38.67■■■■□ 3.78
PPFIBP1-213ENST00000541633 PEG3Q9GZU2 1588 aa38.65■■■■□ 3.78
PPFIBP1-213ENST00000541633 NCAPD3P42695 1498 aa38.59■■■■□ 3.77
PPFIBP1-213ENST00000541633 RSF1Q96T23 1441 aaPredicted RBP38.55■■■■□ 3.76
PPFIBP1-213ENST00000541633 HMGXB3Q12766 1538 aa38.5■■■■□ 3.75
PPFIBP1-213ENST00000541633 WIZO95785 1651 aa38.46■■■■□ 3.75
PPFIBP1-213ENST00000541633 BAZ1BQ9UIG0 1483 aaKnown RBP38.43■■■■□ 3.74
PPFIBP1-213ENST00000541633 TOP2AP11388 1531 aaKnown RBP38.12■■■■□ 3.69
PPFIBP1-213ENST00000541633 SUPT5HO00267 1087 aaKnown RBP37.92■■■■□ 3.66
PPFIBP1-213ENST00000541633 CCDC88BA6NC98 1476 aa37.61■■■■□ 3.61
PPFIBP1-213ENST00000541633 NESP48681 1621 aa37.59■■■■□ 3.61
PPFIBP1-213ENST00000541633 LAMC3Q9Y6N6 1575 aa37.55■■■■□ 3.6
PPFIBP1-213ENST00000541633 CADPSQ9ULU8 1353 aa37.49■■■■□ 3.59
PPFIBP1-213ENST00000541633 ERCC6Q03468 1493 aa37.42■■■■□ 3.58
PPFIBP1-213ENST00000541633 CFTRP13569 1480 aa37.38■■■■□ 3.57
PPFIBP1-213ENST00000541633 PDS5BQ9NTI5 1447 aa37.27■■■■□ 3.56
PPFIBP1-213ENST00000541633 PRDM2Q13029 1718 aa37.24■■■■□ 3.55
PPFIBP1-213ENST00000541633 KIF21AQ7Z4S6 1674 aa37.18■■■■□ 3.54
PPFIBP1-213ENST00000541633 FANCD2Q9BXW9 1451 aa37.08■■■■□ 3.53
PPFIBP1-213ENST00000541633 THOC2Q8NI27 1593 aaKnown RBP37.04■■■■□ 3.52
PPFIBP1-213ENST00000541633 CEP164Q9UPV0 1460 aa37.02■■■■□ 3.52
PPFIBP1-213ENST00000541633 CUX2O14529 1486 aa37.01■■■■□ 3.52
PPFIBP1-213ENST00000541633 MRC2Q9UBG0 1479 aa36.88■■■■□ 3.49
PPFIBP1-213ENST00000541633 WDR62O43379 1518 aa36.75■■■■□ 3.47
PPFIBP1-213ENST00000541633 URB2Q14146 1524 aaKnown RBP36.64■■■■□ 3.46
PPFIBP1-213ENST00000541633 ABCC8Q09428 1581 aa36.62■■■■□ 3.45
PPFIBP1-213ENST00000541633 DNMBPQ6XZF7 1577 aa36.57■■■■□ 3.44
PPFIBP1-213ENST00000541633 TOPBP1Q92547 1522 aa36.54■■■■□ 3.44
PPFIBP1-213ENST00000541633 CUX1P39880 1505 aa36.42■■■■□ 3.42
PPFIBP1-213ENST00000541633 WRNQ14191 1432 aaPredicted RBP eCLIP36.38■■■■□ 3.41
PPFIBP1-213ENST00000541633 TOP2BQ02880 1626 aa36.27■■■■□ 3.4
PPFIBP1-213ENST00000541633 BIVM-ERCC5R4GMW8 1640 aa36.27■■■■□ 3.4
PPFIBP1-213ENST00000541633 SYNJ1O43426 1573 aa36.25■■■■□ 3.39
PPFIBP1-213ENST00000541633 POLA1P09884 1462 aaPredicted RBP36.24■■■■□ 3.39
PPFIBP1-213ENST00000541633 FGD5Q6ZNL6 1462 aa36.24■■■■□ 3.39
PPFIBP1-213ENST00000541633 IFT140Q96RY7 1462 aa36.22■■■■□ 3.39
PPFIBP1-213ENST00000541633 SOGA1O94964 1423 aa36.1■■■■□ 3.37
PPFIBP1-213ENST00000541633 TARBP1Q13395 1621 aaKnown RBP36.1■■■■□ 3.37
PPFIBP1-213ENST00000541633 RAD54L2Q9Y4B4 1467 aa36.05■■■■□ 3.36
PPFIBP1-213ENST00000541633 ZNF608Q9ULD9 1512 aaPredicted RBP35.98■■■■□ 3.35
PPFIBP1-213ENST00000541633 WDR97A6NE52 1622 aa35.94■■■■□ 3.34
PPFIBP1-213ENST00000541633 ABCA10Q8WWZ4 1543 aa35.92■■■■□ 3.34
PPFIBP1-213ENST00000541633 EIF4G3O43432 1585 aaKnown RBP35.89■■■■□ 3.34
PPFIBP1-213ENST00000541633 TRIM41Q8WV44 630 aa35.84■■■■□ 3.33
PPFIBP1-213ENST00000541633 TDRD9Q8NDG6 1382 aaKnown RBP35.81■■■■□ 3.32
PPFIBP1-213ENST00000541633 AQRO60306 1485 aaKnown RBP eCLIP35.8■■■■□ 3.32
PPFIBP1-213ENST00000541633 DNAJC5Q9H3Z4 198 aa35.79■■■■□ 3.32
PPFIBP1-213ENST00000541633 ABCA5Q8WWZ7 1642 aa35.75■■■■□ 3.31
PPFIBP1-213ENST00000541633 GAPVD1Q14C86 1478 aa35.72■■■■□ 3.31
PPFIBP1-213ENST00000541633 PBRM1Q86U86 1689 aa35.66■■■■□ 3.3
PPFIBP1-213ENST00000541633 GRIN2BQ13224 1484 aa35.66■■■■□ 3.3
PPFIBP1-213ENST00000541633 CHIC1Q5VXU3 224 aa35.64■■■■□ 3.3
PPFIBP1-213ENST00000541633 KIF27Q86VH2 1401 aa35.61■■■■□ 3.29
PPFIBP1-213ENST00000541633 MAGI1Q96QZ7 1491 aaPredicted RBP35.54■■■■□ 3.28
PPFIBP1-213ENST00000541633 SNAPC4Q5SXM2 1469 aa35.53■■■■□ 3.28
PPFIBP1-213ENST00000541633 ERICH3Q5RHP9 1530 aa35.52■■■■□ 3.28
PPFIBP1-213ENST00000541633 OSCARQ8IYS5 282 aa35.47■■■■□ 3.27
PPFIBP1-213ENST00000541633 CHD1O14646 1710 aa35.41■■■■□ 3.26
PPFIBP1-213ENST00000541633 SYNJ2O15056 1496 aa35.38■■■■□ 3.25
PPFIBP1-213ENST00000541633 ADAMTS12P58397 1594 aa35.38■■■■□ 3.25
PPFIBP1-213ENST00000541633 FBLN2P98095 1184 aa35.34■■■■□ 3.25
PPFIBP1-213ENST00000541633 CUL7Q14999 1698 aa35.33■■■■□ 3.25
PPFIBP1-213ENST00000541633 FHAD1B1AJZ9 1412 aa35.33■■■■□ 3.25
PPFIBP1-213ENST00000541633 IGF1RP08069 1367 aa35.33■■■■□ 3.25
PPFIBP1-213ENST00000541633 RUSC2Q8N2Y8 1516 aa35.32■■■■□ 3.24
PPFIBP1-213ENST00000541633 CHMP7Q8WUX9 453 aaPredicted RBP35.31■■■■□ 3.24
PPFIBP1-213ENST00000541633 EEA1Q15075 1411 aa35.27■■■■□ 3.24
PPFIBP1-213ENST00000541633 GRIN2AQ12879 1464 aa35.19■■■■□ 3.22
PPFIBP1-213ENST00000541633 CARMIL1Q5VZK9 1371 aa35.17■■■■□ 3.22
PPFIBP1-213ENST00000541633 CSRNP3Q8WYN3 585 aa35.07■■■■□ 3.2
PPFIBP1-213ENST00000541633 RAPGEF2Q9Y4G8 1499 aa35.03■■■■□ 3.2
PPFIBP1-213ENST00000541633 FAM9AQ8IZU1 332 aaPredicted RBP35.03■■■■□ 3.2
PPFIBP1-213ENST00000541633 CLASP1Q7Z460 1538 aa35.02■■■■□ 3.2
PPFIBP1-213ENST00000541633 NUP160Q12769 1436 aa35■■■■□ 3.19
PPFIBP1-213ENST00000541633 PRXQ9BXM0 1461 aa34.99■■■■□ 3.19
PPFIBP1-213ENST00000541633 CEP170Q5SW79 1584 aa34.98■■■■□ 3.19
PPFIBP1-213ENST00000541633 RIMBP3CA6NJZ7 1639 aa34.92■■■■□ 3.18
PPFIBP1-213ENST00000541633 RIMBP3BA6NNM3 1639 aa34.92■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms