RNA–Protein interactions for RNA: ENST00000541554.1

ATG16L2-216, Transcript of autophagy related 16 like 2, humanhuman

TSL 3

Gene ATG16L2, Length 295 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG16L2-216ENST00000541554 NISCHQ9Y2I1 1504 aa31.1■■■□□ 2.57
ATG16L2-216ENST00000541554 ABCC9O60706 1549 aa28.08■■■□□ 2.08
ATG16L2-216ENST00000541554 CCDC180Q9P1Z9 1646 aa27.85■■■□□ 2.05
ATG16L2-216ENST00000541554 RB1CC1Q8TDY2 1594 aa26.58■■□□□ 1.85
ATG16L2-216ENST00000541554 DCAF8L2P0C7V8 631 aa26.46■■□□□ 1.83
ATG16L2-216ENST00000541554 DNAJC5BQ9UF47 199 aa26.43■■□□□ 1.82
ATG16L2-216ENST00000541554 NACADO15069 1562 aa26.36■■□□□ 1.81
ATG16L2-216ENST00000541554 PABPN1Q86U42 306 aaKnown RBP eCLIP26.19■■□□□ 1.787e-8■■■■■ 27.8
ATG16L2-216ENST00000541554 UNC13AQ9UPW8 1703 aa26.05■■□□□ 1.76
ATG16L2-216ENST00000541554 MYO15BQ96JP2 1530 aa25.9■■□□□ 1.74
ATG16L2-216ENST00000541554 BICRAQ9NZM4 1560 aa25.86■■□□□ 1.73
ATG16L2-216ENST00000541554 ZCCHC6Q5VYS8 1495 aaKnown RBP25.74■■□□□ 1.71
ATG16L2-216ENST00000541554 DCAF1Q9Y4B6 1507 aa25.58■■□□□ 1.69
ATG16L2-216ENST00000541554 SCRIBQ14160 1630 aa25.52■■□□□ 1.68
ATG16L2-216ENST00000541554 SHROOM4Q9ULL8 1493 aa25.32■■□□□ 1.64
ATG16L2-216ENST00000541554 CC2D2AQ9P2K1 1620 aa25.3■■□□□ 1.64
ATG16L2-216ENST00000541554 CECR2Q9BXF3 1484 aa25.23■■□□□ 1.63
ATG16L2-216ENST00000541554 EIF4G1Q04637 1599 aaKnown RBP25.21■■□□□ 1.63
ATG16L2-216ENST00000541554 NCAPD3P42695 1498 aa24.35■■□□□ 1.49
ATG16L2-216ENST00000541554 ATAD2BQ9ULI0 1458 aa24.32■■□□□ 1.48
ATG16L2-216ENST00000541554 SMARCA4P51532 1647 aa24.28■■□□□ 1.48
ATG16L2-216ENST00000541554 DNAJC5Q9H3Z4 198 aa24.2■■□□□ 1.46
ATG16L2-216ENST00000541554 SMARCA2P51531 1590 aa24.19■■□□□ 1.46
ATG16L2-216ENST00000541554 ERCC6Q03468 1493 aa24.19■■□□□ 1.46
ATG16L2-216ENST00000541554 HMGXB3Q12766 1538 aa24.14■■□□□ 1.45
ATG16L2-216ENST00000541554 NESP48681 1621 aa24.11■■□□□ 1.45
ATG16L2-216ENST00000541554 BAZ1AQ9NRL2 1556 aaPredicted RBP24.11■■□□□ 1.45
ATG16L2-216ENST00000541554 BAZ1BQ9UIG0 1483 aaKnown RBP24.07■■□□□ 1.44
ATG16L2-216ENST00000541554 CUX2O14529 1486 aa24.07■■□□□ 1.44
ATG16L2-216ENST00000541554 MROH2BQ7Z745 1585 aa24.02■■□□□ 1.44
ATG16L2-216ENST00000541554 PEG3Q9GZU2 1588 aa23.96■■□□□ 1.43
ATG16L2-216ENST00000541554 LAMC3Q9Y6N6 1575 aa23.8■■□□□ 1.4
ATG16L2-216ENST00000541554 THOC2Q8NI27 1593 aaKnown RBP23.78■■□□□ 1.4
ATG16L2-216ENST00000541554 KIF21AQ7Z4S6 1674 aa23.76■■□□□ 1.39
ATG16L2-216ENST00000541554 WIZO95785 1651 aa23.75■■□□□ 1.39
ATG16L2-216ENST00000541554 PDS5BQ9NTI5 1447 aa23.68■■□□□ 1.38
ATG16L2-216ENST00000541554 CADPSQ9ULU8 1353 aa23.65■■□□□ 1.38
ATG16L2-216ENST00000541554 MRC2Q9UBG0 1479 aa23.5■■□□□ 1.35
ATG16L2-216ENST00000541554 RSF1Q96T23 1441 aaPredicted RBP23.49■■□□□ 1.35
ATG16L2-216ENST00000541554 WDR62O43379 1518 aa23.42■■□□□ 1.34
ATG16L2-216ENST00000541554 CEP164Q9UPV0 1460 aa23.4■■□□□ 1.34
ATG16L2-216ENST00000541554 FANCD2Q9BXW9 1451 aa23.39■■□□□ 1.34
ATG16L2-216ENST00000541554 TOP2AP11388 1531 aaKnown RBP23.37■■□□□ 1.33
ATG16L2-216ENST00000541554 CFTRP13569 1480 aa23.35■■□□□ 1.33
ATG16L2-216ENST00000541554 TRIM41Q8WV44 630 aa23.24■■□□□ 1.31
ATG16L2-216ENST00000541554 URB2Q14146 1524 aaKnown RBP23.23■■□□□ 1.31
ATG16L2-216ENST00000541554 CCDC88BA6NC98 1476 aa23.17■■□□□ 1.3
ATG16L2-216ENST00000541554 PRDM2Q13029 1718 aa23.1■■□□□ 1.29
ATG16L2-216ENST00000541554 OSCARQ8IYS5 282 aa23.05■■□□□ 1.28
ATG16L2-216ENST00000541554 ZNF608Q9ULD9 1512 aaPredicted RBP22.98■■□□□ 1.27
ATG16L2-216ENST00000541554 TOPBP1Q92547 1522 aa22.94■■□□□ 1.26
ATG16L2-216ENST00000541554 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
ATG16L2-216ENST00000541554 DNMBPQ6XZF7 1577 aa22.83■■□□□ 1.25
ATG16L2-216ENST00000541554 ABCC8Q09428 1581 aa22.8■■□□□ 1.24
ATG16L2-216ENST00000541554 EIF4G3O43432 1585 aaKnown RBP22.8■■□□□ 1.24
ATG16L2-216ENST00000541554 AQRO60306 1485 aaKnown RBP eCLIP22.78■■□□□ 1.241e-6■■■□□ 14.9
ATG16L2-216ENST00000541554 RIMBP3CA6NJZ7 1639 aa22.77■■□□□ 1.24
ATG16L2-216ENST00000541554 RIMBP3BA6NNM3 1639 aa22.77■■□□□ 1.24
ATG16L2-216ENST00000541554 RIMBP3Q9UFD9 1639 aa22.77■■□□□ 1.24
ATG16L2-216ENST00000541554 TARBP1Q13395 1621 aaKnown RBP22.74■■□□□ 1.23
ATG16L2-216ENST00000541554 POLA1P09884 1462 aaPredicted RBP22.71■■□□□ 1.23
ATG16L2-216ENST00000541554 RAD54L2Q9Y4B4 1467 aa22.7■■□□□ 1.22
ATG16L2-216ENST00000541554 FBLN2P98095 1184 aa22.68■■□□□ 1.22
ATG16L2-216ENST00000541554 CHD1O14646 1710 aa22.67■■□□□ 1.22
ATG16L2-216ENST00000541554 ARHGEF11O15085 1522 aa22.67■■□□□ 1.22
ATG16L2-216ENST00000541554 TDRD9Q8NDG6 1382 aaKnown RBP22.63■■□□□ 1.21
ATG16L2-216ENST00000541554 SOGA1O94964 1423 aa22.63■■□□□ 1.21
ATG16L2-216ENST00000541554 CYB5RLQ6IPT4 315 aa22.59■■□□□ 1.21
ATG16L2-216ENST00000541554 FGD5Q6ZNL6 1462 aa22.58■■□□□ 1.2
ATG16L2-216ENST00000541554 CUX1P39880 1505 aa22.56■■□□□ 1.2
ATG16L2-216ENST00000541554 SUPT5HO00267 1087 aaKnown RBP22.55■■□□□ 1.2
ATG16L2-216ENST00000541554 SNAPC4Q5SXM2 1469 aa22.5■■□□□ 1.19
ATG16L2-216ENST00000541554 ARAP1Q96P48 1450 aa22.46■■□□□ 1.19
ATG16L2-216ENST00000541554 CHMP7Q8WUX9 453 aaPredicted RBP22.44■■□□□ 1.18
ATG16L2-216ENST00000541554 GRIN2BQ13224 1484 aa22.39■■□□□ 1.17
ATG16L2-216ENST00000541554 WDR97A6NE52 1622 aa22.38■■□□□ 1.17
ATG16L2-216ENST00000541554 TRHP20396 242 aaPredicted RBP22.37■■□□□ 1.17
ATG16L2-216ENST00000541554 MAGI1Q96QZ7 1491 aaPredicted RBP22.36■■□□□ 1.17
ATG16L2-216ENST00000541554 CLASP1Q7Z460 1538 aa22.35■■□□□ 1.17
ATG16L2-216ENST00000541554 PBRM1Q86U86 1689 aa22.33■■□□□ 1.17
ATG16L2-216ENST00000541554 GAPVD1Q14C86 1478 aa22.33■■□□□ 1.16
ATG16L2-216ENST00000541554 SYNJ1O43426 1573 aa22.33■■□□□ 1.16
ATG16L2-216ENST00000541554 SYNJ2O15056 1496 aa22.31■■□□□ 1.16
ATG16L2-216ENST00000541554 ABCA10Q8WWZ4 1543 aa22.26■■□□□ 1.15
ATG16L2-216ENST00000541554 ABCA5Q8WWZ7 1642 aa22.24■■□□□ 1.15
ATG16L2-216ENST00000541554 WRNQ14191 1432 aaPredicted RBP eCLIP22.18■■□□□ 1.14
ATG16L2-216ENST00000541554 BIVM-ERCC5R4GMW8 1640 aa22.14■■□□□ 1.14
ATG16L2-216ENST00000541554 TOP2BQ02880 1626 aa22.13■■□□□ 1.13
ATG16L2-216ENST00000541554 GRIN2AQ12879 1464 aa22.11■■□□□ 1.13
ATG16L2-216ENST00000541554 ERCC6L2Q5T890 1561 aa22.11■■□□□ 1.13
ATG16L2-216ENST00000541554 ADAMTS12P58397 1594 aa22.09■■□□□ 1.13
ATG16L2-216ENST00000541554 CEP170Q5SW79 1584 aa22.07■■□□□ 1.12
ATG16L2-216ENST00000541554 FHAD1B1AJZ9 1412 aa22.02■■□□□ 1.12
ATG16L2-216ENST00000541554 NUP160Q12769 1436 aa22.02■■□□□ 1.12
ATG16L2-216ENST00000541554 ERICH3Q5RHP9 1530 aa21.96■■□□□ 1.11
ATG16L2-216ENST00000541554 SHROOM2Q13796 1616 aa21.92■■□□□ 1.1
ATG16L2-216ENST00000541554 PRG4Q92954 1404 aaPredicted RBP21.87■■□□□ 1.09
ATG16L2-216ENST00000541554 JPH4Q96JJ6 628 aa21.86■■□□□ 1.09
ATG16L2-216ENST00000541554 RUSC2Q8N2Y8 1516 aa21.78■■□□□ 1.08
ATG16L2-216ENST00000541554 IGF1RP08069 1367 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms