RNA–Protein interactions for RNA: ENST00000541419.1

AC079949.1-201, humanhuman

TSL 3 BASIC

Gene AC079949.1, Length 505 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC079949.1-201ENST00000541419 NISCHQ9Y2I1 1504 aa32.82■■■□□ 2.84
AC079949.1-201ENST00000541419 ABCC9O60706 1549 aa29.96■■■□□ 2.39
AC079949.1-201ENST00000541419 CCDC180Q9P1Z9 1646 aa29.54■■■□□ 2.32
AC079949.1-201ENST00000541419 DNAJC5BQ9UF47 199 aa28.55■■■□□ 2.16
AC079949.1-201ENST00000541419 RB1CC1Q8TDY2 1594 aa28.32■■■□□ 2.12
AC079949.1-201ENST00000541419 NACADO15069 1562 aa28.06■■■□□ 2.08
AC079949.1-201ENST00000541419 DCAF8L2P0C7V8 631 aa27.91■■■□□ 2.06
AC079949.1-201ENST00000541419 PABPN1Q86U42 306 aaKnown RBP eCLIP27.89■■■□□ 2.06
AC079949.1-201ENST00000541419 UNC13AQ9UPW8 1703 aa27.71■■■□□ 2.03
AC079949.1-201ENST00000541419 BICRAQ9NZM4 1560 aa27.56■■■□□ 2
AC079949.1-201ENST00000541419 MYO15BQ96JP2 1530 aa27.55■■■□□ 2
AC079949.1-201ENST00000541419 ZCCHC6Q5VYS8 1495 aaKnown RBP27.09■■□□□ 1.93
AC079949.1-201ENST00000541419 SHROOM4Q9ULL8 1493 aa27.07■■□□□ 1.92
AC079949.1-201ENST00000541419 DCAF1Q9Y4B6 1507 aa27.06■■□□□ 1.92
AC079949.1-201ENST00000541419 CC2D2AQ9P2K1 1620 aa27.04■■□□□ 1.92
AC079949.1-201ENST00000541419 CECR2Q9BXF3 1484 aa27.03■■□□□ 1.92
AC079949.1-201ENST00000541419 SCRIBQ14160 1630 aa26.91■■□□□ 1.9
AC079949.1-201ENST00000541419 EIF4G1Q04637 1599 aaKnown RBP26.88■■□□□ 1.89
AC079949.1-201ENST00000541419 DNAJC5Q9H3Z4 198 aa26.45■■□□□ 1.82
AC079949.1-201ENST00000541419 CUX2O14529 1486 aa25.94■■□□□ 1.74
AC079949.1-201ENST00000541419 NCAPD3P42695 1498 aa25.94■■□□□ 1.74
AC079949.1-201ENST00000541419 ERCC6Q03468 1493 aa25.86■■□□□ 1.73
AC079949.1-201ENST00000541419 ATAD2BQ9ULI0 1458 aa25.8■■□□□ 1.72
AC079949.1-201ENST00000541419 SMARCA2P51531 1590 aa25.67■■□□□ 1.7
AC079949.1-201ENST00000541419 HMGXB3Q12766 1538 aa25.65■■□□□ 1.7
AC079949.1-201ENST00000541419 NESP48681 1621 aa25.65■■□□□ 1.7
AC079949.1-201ENST00000541419 SMARCA4P51532 1647 aa25.65■■□□□ 1.7
AC079949.1-201ENST00000541419 BAZ1BQ9UIG0 1483 aaKnown RBP25.49■■□□□ 1.67
AC079949.1-201ENST00000541419 BAZ1AQ9NRL2 1556 aaPredicted RBP25.45■■□□□ 1.66
AC079949.1-201ENST00000541419 THOC2Q8NI27 1593 aaKnown RBP25.41■■□□□ 1.66
AC079949.1-201ENST00000541419 PEG3Q9GZU2 1588 aa25.41■■□□□ 1.66
AC079949.1-201ENST00000541419 LAMC3Q9Y6N6 1575 aa25.36■■□□□ 1.65
AC079949.1-201ENST00000541419 MROH2BQ7Z745 1585 aa25.29■■□□□ 1.64
AC079949.1-201ENST00000541419 KIF21AQ7Z4S6 1674 aa25.26■■□□□ 1.63
AC079949.1-201ENST00000541419 PDS5BQ9NTI5 1447 aa25.25■■□□□ 1.63
AC079949.1-201ENST00000541419 CADPSQ9ULU8 1353 aa25.14■■□□□ 1.61
AC079949.1-201ENST00000541419 TRIM41Q8WV44 630 aa25.1■■□□□ 1.61
AC079949.1-201ENST00000541419 MRC2Q9UBG0 1479 aa25.04■■□□□ 1.6
AC079949.1-201ENST00000541419 WDR62O43379 1518 aa24.99■■□□□ 1.59
AC079949.1-201ENST00000541419 WIZO95785 1651 aa24.95■■□□□ 1.58
AC079949.1-201ENST00000541419 CEP164Q9UPV0 1460 aa24.86■■□□□ 1.57
AC079949.1-201ENST00000541419 FANCD2Q9BXW9 1451 aa24.83■■□□□ 1.56
AC079949.1-201ENST00000541419 OSCARQ8IYS5 282 aa24.77■■□□□ 1.56
AC079949.1-201ENST00000541419 CFTRP13569 1480 aa24.76■■□□□ 1.55
AC079949.1-201ENST00000541419 URB2Q14146 1524 aaKnown RBP24.66■■□□□ 1.54
AC079949.1-201ENST00000541419 RSF1Q96T23 1441 aaPredicted RBP24.64■■□□□ 1.54
AC079949.1-201ENST00000541419 TOP2AP11388 1531 aaKnown RBP24.59■■□□□ 1.53
AC079949.1-201ENST00000541419 RIMBP3CA6NJZ7 1639 aa24.43■■□□□ 1.5
AC079949.1-201ENST00000541419 RIMBP3BA6NNM3 1639 aa24.43■■□□□ 1.5
AC079949.1-201ENST00000541419 RIMBP3Q9UFD9 1639 aa24.43■■□□□ 1.5
AC079949.1-201ENST00000541419 PRDM2Q13029 1718 aa24.43■■□□□ 1.5
AC079949.1-201ENST00000541419 ZNF608Q9ULD9 1512 aaPredicted RBP24.42■■□□□ 1.5
AC079949.1-201ENST00000541419 IFT140Q96RY7 1462 aa24.4■■□□□ 1.5
AC079949.1-201ENST00000541419 CCDC88BA6NC98 1476 aa24.37■■□□□ 1.49
AC079949.1-201ENST00000541419 TOPBP1Q92547 1522 aa24.32■■□□□ 1.48
AC079949.1-201ENST00000541419 ARHGEF11O15085 1522 aa24.31■■□□□ 1.48
AC079949.1-201ENST00000541419 ABCC8Q09428 1581 aa24.24■■□□□ 1.47
AC079949.1-201ENST00000541419 CYB5RLQ6IPT4 315 aa24.23■■□□□ 1.47
AC079949.1-201ENST00000541419 EIF4G3O43432 1585 aaKnown RBP24.2■■□□□ 1.47
AC079949.1-201ENST00000541419 AQRO60306 1485 aaKnown RBP eCLIP24.17■■□□□ 1.46
AC079949.1-201ENST00000541419 DNMBPQ6XZF7 1577 aa24.16■■□□□ 1.46
AC079949.1-201ENST00000541419 TARBP1Q13395 1621 aaKnown RBP24.13■■□□□ 1.45
AC079949.1-201ENST00000541419 CHD1O14646 1710 aa24.12■■□□□ 1.45
AC079949.1-201ENST00000541419 FBLN2P98095 1184 aa24.08■■□□□ 1.45
AC079949.1-201ENST00000541419 ARAP1Q96P48 1450 aa24.07■■□□□ 1.44
AC079949.1-201ENST00000541419 TRHP20396 242 aaPredicted RBP24.05■■□□□ 1.44
AC079949.1-201ENST00000541419 POLA1P09884 1462 aaPredicted RBP24.05■■□□□ 1.44
AC079949.1-201ENST00000541419 RAD54L2Q9Y4B4 1467 aa24■■□□□ 1.43
AC079949.1-201ENST00000541419 TDRD9Q8NDG6 1382 aaKnown RBP23.97■■□□□ 1.43
AC079949.1-201ENST00000541419 SOGA1O94964 1423 aa23.95■■□□□ 1.42
AC079949.1-201ENST00000541419 SNAPC4Q5SXM2 1469 aa23.87■■□□□ 1.41
AC079949.1-201ENST00000541419 CHMP7Q8WUX9 453 aaPredicted RBP23.85■■□□□ 1.41
AC079949.1-201ENST00000541419 FGD5Q6ZNL6 1462 aa23.84■■□□□ 1.41
AC079949.1-201ENST00000541419 CLASP1Q7Z460 1538 aa23.84■■□□□ 1.41
AC079949.1-201ENST00000541419 WDR97A6NE52 1622 aa23.81■■□□□ 1.4
AC079949.1-201ENST00000541419 MAGI1Q96QZ7 1491 aaPredicted RBP23.79■■□□□ 1.4
AC079949.1-201ENST00000541419 SYNJ1O43426 1573 aa23.78■■□□□ 1.4
AC079949.1-201ENST00000541419 CUX1P39880 1505 aa23.77■■□□□ 1.4
AC079949.1-201ENST00000541419 GRIN2BQ13224 1484 aa23.75■■□□□ 1.39
AC079949.1-201ENST00000541419 SYNJ2O15056 1496 aa23.72■■□□□ 1.39
AC079949.1-201ENST00000541419 GAPVD1Q14C86 1478 aa23.63■■□□□ 1.37
AC079949.1-201ENST00000541419 PBRM1Q86U86 1689 aa23.6■■□□□ 1.37
AC079949.1-201ENST00000541419 AEBP2Q6ZN18 517 aaPredicted RBP23.6■■□□□ 1.37
AC079949.1-201ENST00000541419 ABCA10Q8WWZ4 1543 aa23.55■■□□□ 1.36
AC079949.1-201ENST00000541419 ABCA5Q8WWZ7 1642 aa23.52■■□□□ 1.36
AC079949.1-201ENST00000541419 ERCC6L2Q5T890 1561 aa23.48■■□□□ 1.35
AC079949.1-201ENST00000541419 GRIN2AQ12879 1464 aa23.45■■□□□ 1.34
AC079949.1-201ENST00000541419 NUP160Q12769 1436 aa23.41■■□□□ 1.34
AC079949.1-201ENST00000541419 WRNQ14191 1432 aaPredicted RBP eCLIP23.38■■□□□ 1.33
AC079949.1-201ENST00000541419 CEP170Q5SW79 1584 aa23.38■■□□□ 1.33
AC079949.1-201ENST00000541419 ADAMTS12P58397 1594 aa23.36■■□□□ 1.33
AC079949.1-201ENST00000541419 FHAD1B1AJZ9 1412 aa23.33■■□□□ 1.32
AC079949.1-201ENST00000541419 SHROOM2Q13796 1616 aa23.32■■□□□ 1.32
AC079949.1-201ENST00000541419 SUPT5HO00267 1087 aaKnown RBP23.31■■□□□ 1.32
AC079949.1-201ENST00000541419 TOP2BQ02880 1626 aa23.26■■□□□ 1.31
AC079949.1-201ENST00000541419 BIVM-ERCC5R4GMW8 1640 aa23.26■■□□□ 1.31
AC079949.1-201ENST00000541419 KIF13AQ9H1H9 1805 aa23.23■■□□□ 1.31
AC079949.1-201ENST00000541419 ERICH3Q5RHP9 1530 aa23.23■■□□□ 1.31
AC079949.1-201ENST00000541419 JPH4Q96JJ6 628 aa23.22■■□□□ 1.31
AC079949.1-201ENST00000541419 PRG4Q92954 1404 aaPredicted RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms