RNA–Protein interactions for RNA: ENST00000541288.5

AC087258.1-201, humanhuman

TSL 3

Gene AC087258.1, Length 641 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087258.1-201ENST00000541288 NISCHQ9Y2I1 1504 aa31.47■■■□□ 2.63
AC087258.1-201ENST00000541288 CCDC180Q9P1Z9 1646 aa27.99■■■□□ 2.07
AC087258.1-201ENST00000541288 ABCC9O60706 1549 aa27.6■■■□□ 2.01
AC087258.1-201ENST00000541288 DCAF8L2P0C7V8 631 aa26.54■■□□□ 1.84
AC087258.1-201ENST00000541288 RB1CC1Q8TDY2 1594 aa26.4■■□□□ 1.82
AC087258.1-201ENST00000541288 NACADO15069 1562 aa26.3■■□□□ 1.8
AC087258.1-201ENST00000541288 ZCCHC6Q5VYS8 1495 aaKnown RBP26.19■■□□□ 1.78
AC087258.1-201ENST00000541288 MYO15BQ96JP2 1530 aa26■■□□□ 1.75
AC087258.1-201ENST00000541288 DCAF1Q9Y4B6 1507 aa25.91■■□□□ 1.74
AC087258.1-201ENST00000541288 UNC13AQ9UPW8 1703 aa25.91■■□□□ 1.74
AC087258.1-201ENST00000541288 PABPN1Q86U42 306 aaKnown RBP eCLIP25.8■■□□□ 1.72
AC087258.1-201ENST00000541288 SCRIBQ14160 1630 aa25.7■■□□□ 1.7
AC087258.1-201ENST00000541288 BICRAQ9NZM4 1560 aa25.62■■□□□ 1.69
AC087258.1-201ENST00000541288 DNAJC5BQ9UF47 199 aa25.35■■□□□ 1.65
AC087258.1-201ENST00000541288 SHROOM4Q9ULL8 1493 aa25.16■■□□□ 1.62
AC087258.1-201ENST00000541288 EIF4G1Q04637 1599 aaKnown RBP24.96■■□□□ 1.59
AC087258.1-201ENST00000541288 CC2D2AQ9P2K1 1620 aa24.91■■□□□ 1.58
AC087258.1-201ENST00000541288 CECR2Q9BXF3 1484 aa24.73■■□□□ 1.55
AC087258.1-201ENST00000541288 SMARCA4P51532 1647 aa24.47■■□□□ 1.51
AC087258.1-201ENST00000541288 BAZ1AQ9NRL2 1556 aaPredicted RBP24.39■■□□□ 1.5
AC087258.1-201ENST00000541288 MROH2BQ7Z745 1585 aa24.32■■□□□ 1.48
AC087258.1-201ENST00000541288 ATAD2BQ9ULI0 1458 aa24.32■■□□□ 1.48
AC087258.1-201ENST00000541288 SMARCA2P51531 1590 aa24.27■■□□□ 1.48
AC087258.1-201ENST00000541288 NCAPD3P42695 1498 aa24.25■■□□□ 1.47
AC087258.1-201ENST00000541288 BAZ1BQ9UIG0 1483 aaKnown RBP24.15■■□□□ 1.46
AC087258.1-201ENST00000541288 HMGXB3Q12766 1538 aa24.15■■□□□ 1.46
AC087258.1-201ENST00000541288 PEG3Q9GZU2 1588 aa24.12■■□□□ 1.45
AC087258.1-201ENST00000541288 WIZO95785 1651 aa24.11■■□□□ 1.45
AC087258.1-201ENST00000541288 RSF1Q96T23 1441 aaPredicted RBP23.97■■□□□ 1.43
AC087258.1-201ENST00000541288 NESP48681 1621 aa23.86■■□□□ 1.41
AC087258.1-201ENST00000541288 ERCC6Q03468 1493 aa23.76■■□□□ 1.39
AC087258.1-201ENST00000541288 TOP2AP11388 1531 aaKnown RBP23.75■■□□□ 1.39
AC087258.1-201ENST00000541288 LAMC3Q9Y6N6 1575 aa23.66■■□□□ 1.38
AC087258.1-201ENST00000541288 KIF21AQ7Z4S6 1674 aa23.59■■□□□ 1.37
AC087258.1-201ENST00000541288 CADPSQ9ULU8 1353 aa23.58■■□□□ 1.37
AC087258.1-201ENST00000541288 SUPT5HO00267 1087 aaKnown RBP23.5■■□□□ 1.35
AC087258.1-201ENST00000541288 PDS5BQ9NTI5 1447 aa23.5■■□□□ 1.35
AC087258.1-201ENST00000541288 CCDC88BA6NC98 1476 aa23.49■■□□□ 1.35
AC087258.1-201ENST00000541288 THOC2Q8NI27 1593 aaKnown RBP23.44■■□□□ 1.34
AC087258.1-201ENST00000541288 CFTRP13569 1480 aa23.42■■□□□ 1.34
AC087258.1-201ENST00000541288 CUX2O14529 1486 aa23.4■■□□□ 1.34
AC087258.1-201ENST00000541288 FANCD2Q9BXW9 1451 aa23.36■■□□□ 1.33
AC087258.1-201ENST00000541288 CEP164Q9UPV0 1460 aa23.34■■□□□ 1.33
AC087258.1-201ENST00000541288 PRDM2Q13029 1718 aa23.32■■□□□ 1.32
AC087258.1-201ENST00000541288 MRC2Q9UBG0 1479 aa23.31■■□□□ 1.32
AC087258.1-201ENST00000541288 WDR62O43379 1518 aa23.21■■□□□ 1.31
AC087258.1-201ENST00000541288 URB2Q14146 1524 aaKnown RBP23.15■■□□□ 1.3
AC087258.1-201ENST00000541288 TOPBP1Q92547 1522 aa22.99■■□□□ 1.27
AC087258.1-201ENST00000541288 DNMBPQ6XZF7 1577 aa22.94■■□□□ 1.26
AC087258.1-201ENST00000541288 ABCC8Q09428 1581 aa22.88■■□□□ 1.25
AC087258.1-201ENST00000541288 CUX1P39880 1505 aa22.82■■□□□ 1.24
AC087258.1-201ENST00000541288 IFT140Q96RY7 1462 aa22.81■■□□□ 1.24
AC087258.1-201ENST00000541288 ZNF608Q9ULD9 1512 aaPredicted RBP22.81■■□□□ 1.24
AC087258.1-201ENST00000541288 DNAJC5Q9H3Z4 198 aa22.79■■□□□ 1.24
AC087258.1-201ENST00000541288 POLA1P09884 1462 aaPredicted RBP22.79■■□□□ 1.24
AC087258.1-201ENST00000541288 FGD5Q6ZNL6 1462 aa22.75■■□□□ 1.23
AC087258.1-201ENST00000541288 RAD54L2Q9Y4B4 1467 aa22.75■■□□□ 1.23
AC087258.1-201ENST00000541288 TARBP1Q13395 1621 aaKnown RBP22.73■■□□□ 1.23
AC087258.1-201ENST00000541288 EIF4G3O43432 1585 aaKnown RBP22.71■■□□□ 1.23
AC087258.1-201ENST00000541288 SOGA1O94964 1423 aa22.69■■□□□ 1.22
AC087258.1-201ENST00000541288 AQRO60306 1485 aaKnown RBP eCLIP22.66■■□□□ 1.22
AC087258.1-201ENST00000541288 WRNQ14191 1432 aaPredicted RBP eCLIP22.63■■□□□ 1.21
AC087258.1-201ENST00000541288 TDRD9Q8NDG6 1382 aaKnown RBP22.63■■□□□ 1.21
AC087258.1-201ENST00000541288 SYNJ1O43426 1573 aa22.62■■□□□ 1.21
AC087258.1-201ENST00000541288 BIVM-ERCC5R4GMW8 1640 aa22.57■■□□□ 1.2
AC087258.1-201ENST00000541288 TOP2BQ02880 1626 aa22.56■■□□□ 1.2
AC087258.1-201ENST00000541288 WDR97A6NE52 1622 aa22.55■■□□□ 1.2
AC087258.1-201ENST00000541288 CHD1O14646 1710 aa22.49■■□□□ 1.19
AC087258.1-201ENST00000541288 FBLN2P98095 1184 aa22.49■■□□□ 1.19
AC087258.1-201ENST00000541288 OSCARQ8IYS5 282 aa22.48■■□□□ 1.19
AC087258.1-201ENST00000541288 PBRM1Q86U86 1689 aa22.46■■□□□ 1.19
AC087258.1-201ENST00000541288 SNAPC4Q5SXM2 1469 aa22.45■■□□□ 1.18
AC087258.1-201ENST00000541288 ABCA10Q8WWZ4 1543 aa22.45■■□□□ 1.18
AC087258.1-201ENST00000541288 GAPVD1Q14C86 1478 aa22.42■■□□□ 1.18
AC087258.1-201ENST00000541288 ABCA5Q8WWZ7 1642 aa22.41■■□□□ 1.18
AC087258.1-201ENST00000541288 GRIN2BQ13224 1484 aa22.41■■□□□ 1.18
AC087258.1-201ENST00000541288 MAGI1Q96QZ7 1491 aaPredicted RBP22.33■■□□□ 1.16
AC087258.1-201ENST00000541288 CHMP7Q8WUX9 453 aaPredicted RBP22.32■■□□□ 1.16
AC087258.1-201ENST00000541288 SYNJ2O15056 1496 aa22.27■■□□□ 1.16
AC087258.1-201ENST00000541288 ADAMTS12P58397 1594 aa22.22■■□□□ 1.15
AC087258.1-201ENST00000541288 TRIM41Q8WV44 630 aa22.22■■□□□ 1.15
AC087258.1-201ENST00000541288 RIMBP3CA6NJZ7 1639 aa22.2■■□□□ 1.14
AC087258.1-201ENST00000541288 RIMBP3BA6NNM3 1639 aa22.2■■□□□ 1.14
AC087258.1-201ENST00000541288 RIMBP3Q9UFD9 1639 aa22.2■■□□□ 1.14
AC087258.1-201ENST00000541288 ERICH3Q5RHP9 1530 aa22.16■■□□□ 1.14
AC087258.1-201ENST00000541288 ARHGEF11O15085 1522 aa22.15■■□□□ 1.14
AC087258.1-201ENST00000541288 GRIN2AQ12879 1464 aa22.14■■□□□ 1.13
AC087258.1-201ENST00000541288 KIF27Q86VH2 1401 aa22.14■■□□□ 1.13
AC087258.1-201ENST00000541288 FHAD1B1AJZ9 1412 aa22.13■■□□□ 1.13
AC087258.1-201ENST00000541288 CLASP1Q7Z460 1538 aa22.12■■□□□ 1.13
AC087258.1-201ENST00000541288 CEP170Q5SW79 1584 aa22.08■■□□□ 1.12
AC087258.1-201ENST00000541288 IGF1RP08069 1367 aa22.03■■□□□ 1.12
AC087258.1-201ENST00000541288 RUSC2Q8N2Y8 1516 aa22.03■■□□□ 1.12
AC087258.1-201ENST00000541288 CYB5RLQ6IPT4 315 aa22■■□□□ 1.11
AC087258.1-201ENST00000541288 CUL7Q14999 1698 aa22■■□□□ 1.11
AC087258.1-201ENST00000541288 NUP160Q12769 1436 aa21.99■■□□□ 1.11
AC087258.1-201ENST00000541288 ARAP1Q96P48 1450 aa21.97■■□□□ 1.11
AC087258.1-201ENST00000541288 ERCC6L2Q5T890 1561 aa21.93■■□□□ 1.1
AC087258.1-201ENST00000541288 CARMIL1Q5VZK9 1371 aa21.93■■□□□ 1.1
AC087258.1-201ENST00000541288 SHROOM2Q13796 1616 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms