RNA–Protein interactions for RNA: ENST00000541132.1

RAD9A-206, Transcript of RAD9 checkpoint clamp component A, humanhuman

TSL 3

Gene RAD9A, Length 586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9A-206ENST00000541132 NISCHQ9Y2I1 1504 aa45.52■■■■■ 4.88
RAD9A-206ENST00000541132 ABCC9O60706 1549 aa41.37■■■■■ 4.21
RAD9A-206ENST00000541132 CCDC180Q9P1Z9 1646 aa41.02■■■■■ 4.16
RAD9A-206ENST00000541132 RB1CC1Q8TDY2 1594 aa39.22■■■■□ 3.87
RAD9A-206ENST00000541132 DNAJC5BQ9UF47 199 aa39.09■■■■□ 3.85
RAD9A-206ENST00000541132 NACADO15069 1562 aa38.85■■■■□ 3.81
RAD9A-206ENST00000541132 DCAF8L2P0C7V8 631 aa38.67■■■■□ 3.78
RAD9A-206ENST00000541132 PABPN1Q86U42 306 aaKnown RBP eCLIP38.47■■■■□ 3.75
RAD9A-206ENST00000541132 UNC13AQ9UPW8 1703 aa38.37■■■■□ 3.73
RAD9A-206ENST00000541132 MYO15BQ96JP2 1530 aa38.16■■■■□ 3.7
RAD9A-206ENST00000541132 BICRAQ9NZM4 1560 aa38.06■■■■□ 3.68
RAD9A-206ENST00000541132 ZCCHC6Q5VYS8 1495 aaKnown RBP37.64■■■■□ 3.62
RAD9A-206ENST00000541132 DCAF1Q9Y4B6 1507 aa37.56■■■■□ 3.6
RAD9A-206ENST00000541132 SHROOM4Q9ULL8 1493 aa37.48■■■■□ 3.59
RAD9A-206ENST00000541132 SCRIBQ14160 1630 aa37.37■■■■□ 3.57
RAD9A-206ENST00000541132 CC2D2AQ9P2K1 1620 aa37.36■■■■□ 3.57
RAD9A-206ENST00000541132 CECR2Q9BXF3 1484 aa37.29■■■■□ 3.56
RAD9A-206ENST00000541132 EIF4G1Q04637 1599 aaKnown RBP37.17■■■■□ 3.54
RAD9A-206ENST00000541132 DNAJC5Q9H3Z4 198 aa36.15■■■■□ 3.38
RAD9A-206ENST00000541132 NCAPD3P42695 1498 aa35.86■■■■□ 3.33
RAD9A-206ENST00000541132 CUX2O14529 1486 aa35.77■■■■□ 3.32
RAD9A-206ENST00000541132 ERCC6Q03468 1493 aa35.75■■■■□ 3.31
RAD9A-206ENST00000541132 ATAD2BQ9ULI0 1458 aa35.71■■■■□ 3.31
RAD9A-206ENST00000541132 SMARCA2P51531 1590 aa35.6■■■■□ 3.29
RAD9A-206ENST00000541132 SMARCA4P51532 1647 aa35.6■■■■□ 3.29
RAD9A-206ENST00000541132 HMGXB3Q12766 1538 aa35.56■■■■□ 3.28
RAD9A-206ENST00000541132 NESP48681 1621 aa35.43■■■■□ 3.26
RAD9A-206ENST00000541132 BAZ1AQ9NRL2 1556 aaPredicted RBP35.37■■■■□ 3.25
RAD9A-206ENST00000541132 BAZ1BQ9UIG0 1483 aaKnown RBP35.36■■■■□ 3.25
RAD9A-206ENST00000541132 PEG3Q9GZU2 1588 aa35.22■■■■□ 3.23
RAD9A-206ENST00000541132 THOC2Q8NI27 1593 aaKnown RBP35.13■■■■□ 3.21
RAD9A-206ENST00000541132 LAMC3Q9Y6N6 1575 aa35.13■■■■□ 3.21
RAD9A-206ENST00000541132 MROH2BQ7Z745 1585 aa35.08■■■■□ 3.21
RAD9A-206ENST00000541132 KIF21AQ7Z4S6 1674 aa34.99■■■■□ 3.19
RAD9A-206ENST00000541132 PDS5BQ9NTI5 1447 aa34.94■■■■□ 3.18
RAD9A-206ENST00000541132 CADPSQ9ULU8 1353 aa34.76■■■■□ 3.16
RAD9A-206ENST00000541132 WIZO95785 1651 aa34.68■■■■□ 3.14
RAD9A-206ENST00000541132 MRC2Q9UBG0 1479 aa34.65■■■■□ 3.14
RAD9A-206ENST00000541132 WDR62O43379 1518 aa34.56■■■■□ 3.12
RAD9A-206ENST00000541132 TRIM41Q8WV44 630 aa34.49■■■■□ 3.11
RAD9A-206ENST00000541132 CEP164Q9UPV0 1460 aa34.46■■■■□ 3.11
RAD9A-206ENST00000541132 FANCD2Q9BXW9 1451 aa34.38■■■■□ 3.09
RAD9A-206ENST00000541132 CFTRP13569 1480 aa34.28■■■■□ 3.08
RAD9A-206ENST00000541132 RSF1Q96T23 1441 aaPredicted RBP34.21■■■■□ 3.07
RAD9A-206ENST00000541132 TOP2AP11388 1531 aaKnown RBP34.19■■■■□ 3.06
RAD9A-206ENST00000541132 URB2Q14146 1524 aaKnown RBP34.11■■■■□ 3.05
RAD9A-206ENST00000541132 OSCARQ8IYS5 282 aa34.11■■■■□ 3.05
RAD9A-206ENST00000541132 PRDM2Q13029 1718 aa33.98■■■■□ 3.03
RAD9A-206ENST00000541132 CCDC88BA6NC98 1476 aa33.82■■■■□ 3
RAD9A-206ENST00000541132 IFT140Q96RY7 1462 aa33.76■■■■□ 3
RAD9A-206ENST00000541132 ZNF608Q9ULD9 1512 aaPredicted RBP33.75■■■□□ 2.99
RAD9A-206ENST00000541132 RIMBP3CA6NJZ7 1639 aa33.71■■■□□ 2.99
RAD9A-206ENST00000541132 RIMBP3BA6NNM3 1639 aa33.71■■■□□ 2.99
RAD9A-206ENST00000541132 RIMBP3Q9UFD9 1639 aa33.71■■■□□ 2.99
RAD9A-206ENST00000541132 TOPBP1Q92547 1522 aa33.69■■■□□ 2.98
RAD9A-206ENST00000541132 ABCC8Q09428 1581 aa33.6■■■□□ 2.97
RAD9A-206ENST00000541132 EIF4G3O43432 1585 aaKnown RBP33.55■■■□□ 2.96
RAD9A-206ENST00000541132 ARHGEF11O15085 1522 aa33.54■■■□□ 2.96
RAD9A-206ENST00000541132 DNMBPQ6XZF7 1577 aa33.54■■■□□ 2.96
RAD9A-206ENST00000541132 AQRO60306 1485 aaKnown RBP eCLIP33.42■■■□□ 2.946e-8■■□□□ 13.1
RAD9A-206ENST00000541132 TARBP1Q13395 1621 aaKnown RBP33.41■■■□□ 2.94
RAD9A-206ENST00000541132 CHD1O14646 1710 aa33.41■■■□□ 2.94
RAD9A-206ENST00000541132 CYB5RLQ6IPT4 315 aa33.36■■■□□ 2.93
RAD9A-206ENST00000541132 FBLN2P98095 1184 aa33.32■■■□□ 2.92
RAD9A-206ENST00000541132 POLA1P09884 1462 aaPredicted RBP33.31■■■□□ 2.92
RAD9A-206ENST00000541132 RAD54L2Q9Y4B4 1467 aa33.22■■■□□ 2.91
RAD9A-206ENST00000541132 SOGA1O94964 1423 aa33.19■■■□□ 2.9
RAD9A-206ENST00000541132 ARAP1Q96P48 1450 aa33.18■■■□□ 2.9
RAD9A-206ENST00000541132 TDRD9Q8NDG6 1382 aaKnown RBP33.16■■■□□ 2.9
RAD9A-206ENST00000541132 TRHP20396 242 aaPredicted RBP33.13■■■□□ 2.89
RAD9A-206ENST00000541132 FGD5Q6ZNL6 1462 aa33.07■■■□□ 2.88
RAD9A-206ENST00000541132 SNAPC4Q5SXM2 1469 aa33.06■■■□□ 2.88
RAD9A-206ENST00000541132 WDR97A6NE52 1622 aa33.04■■■□□ 2.88
RAD9A-206ENST00000541132 CHMP7Q8WUX9 453 aaPredicted RBP33■■■□□ 2.87
RAD9A-206ENST00000541132 CUX1P39880 1505 aa32.97■■■□□ 2.87
RAD9A-206ENST00000541132 CLASP1Q7Z460 1538 aa32.96■■■□□ 2.87
RAD9A-206ENST00000541132 SYNJ1O43426 1573 aa32.95■■■□□ 2.86
RAD9A-206ENST00000541132 MAGI1Q96QZ7 1491 aaPredicted RBP32.94■■■□□ 2.86
RAD9A-206ENST00000541132 GRIN2BQ13224 1484 aa32.92■■■□□ 2.86
RAD9A-206ENST00000541132 SYNJ2O15056 1496 aa32.84■■■□□ 2.85
RAD9A-206ENST00000541132 PBRM1Q86U86 1689 aa32.81■■■□□ 2.84
RAD9A-206ENST00000541132 GAPVD1Q14C86 1478 aa32.76■■■□□ 2.84
RAD9A-206ENST00000541132 ABCA10Q8WWZ4 1543 aa32.67■■■□□ 2.82
RAD9A-206ENST00000541132 ABCA5Q8WWZ7 1642 aa32.65■■■□□ 2.82
RAD9A-206ENST00000541132 SUPT5HO00267 1087 aaKnown RBP32.53■■■□□ 2.8
RAD9A-206ENST00000541132 GRIN2AQ12879 1464 aa32.49■■■□□ 2.79
RAD9A-206ENST00000541132 WRNQ14191 1432 aaPredicted RBP eCLIP32.47■■■□□ 2.79
RAD9A-206ENST00000541132 ERCC6L2Q5T890 1561 aa32.45■■■□□ 2.78
RAD9A-206ENST00000541132 AEBP2Q6ZN18 517 aaPredicted RBP32.43■■■□□ 2.78
RAD9A-206ENST00000541132 ADAMTS12P58397 1594 aa32.43■■■□□ 2.78
RAD9A-206ENST00000541132 CEP170Q5SW79 1584 aa32.4■■■□□ 2.78
RAD9A-206ENST00000541132 BIVM-ERCC5R4GMW8 1640 aa32.38■■■□□ 2.77
RAD9A-206ENST00000541132 NUP160Q12769 1436 aa32.37■■■□□ 2.77
RAD9A-206ENST00000541132 TOP2BQ02880 1626 aa32.37■■■□□ 2.77
RAD9A-206ENST00000541132 FHAD1B1AJZ9 1412 aa32.33■■■□□ 2.77
RAD9A-206ENST00000541132 SHROOM2Q13796 1616 aa32.29■■■□□ 2.76
RAD9A-206ENST00000541132 ERICH3Q5RHP9 1530 aa32.25■■■□□ 2.75
RAD9A-206ENST00000541132 PRG4Q92954 1404 aaPredicted RBP32.13■■■□□ 2.73
RAD9A-206ENST00000541132 JPH4Q96JJ6 628 aa32.09■■■□□ 2.73
RAD9A-206ENST00000541132 KIF13AQ9H1H9 1805 aa32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms