RNA–Protein interactions for RNA: ENST00000541013.2

GOLGA3-206, Transcript of golgin A3, humanhuman

TSL 3

Gene GOLGA3, Length 498 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA3-206ENST00000541013 NISCHQ9Y2I1 1504 aa38.55■■■■□ 3.76
GOLGA3-206ENST00000541013 CCDC180Q9P1Z9 1646 aa34.41■■■■□ 3.1
GOLGA3-206ENST00000541013 ABCC9O60706 1549 aa34.14■■■■□ 3.06
GOLGA3-206ENST00000541013 RB1CC1Q8TDY2 1594 aa32.62■■■□□ 2.81
GOLGA3-206ENST00000541013 NACADO15069 1562 aa32.51■■■□□ 2.79
GOLGA3-206ENST00000541013 DCAF8L2P0C7V8 631 aa32.25■■■□□ 2.75
GOLGA3-206ENST00000541013 MYO15BQ96JP2 1530 aa32.23■■■□□ 2.75
GOLGA3-206ENST00000541013 ZCCHC6Q5VYS8 1495 aaKnown RBP32.03■■■□□ 2.72
GOLGA3-206ENST00000541013 DNAJC5BQ9UF47 199 aa31.95■■■□□ 2.71
GOLGA3-206ENST00000541013 DCAF1Q9Y4B6 1507 aa31.91■■■□□ 2.7
GOLGA3-206ENST00000541013 UNC13AQ9UPW8 1703 aa31.9■■■□□ 2.7
GOLGA3-206ENST00000541013 PABPN1Q86U42 306 aaKnown RBP eCLIP31.85■■■□□ 2.69
GOLGA3-206ENST00000541013 BICRAQ9NZM4 1560 aa31.77■■■□□ 2.68
GOLGA3-206ENST00000541013 SHROOM4Q9ULL8 1493 aa31.33■■■□□ 2.61
GOLGA3-206ENST00000541013 SCRIBQ14160 1630 aa31.31■■■□□ 2.6
GOLGA3-206ENST00000541013 EIF4G1Q04637 1599 aaKnown RBP30.89■■■□□ 2.54
GOLGA3-206ENST00000541013 CC2D2AQ9P2K1 1620 aa30.87■■■□□ 2.53
GOLGA3-206ENST00000541013 CECR2Q9BXF3 1484 aa30.75■■■□□ 2.51
GOLGA3-206ENST00000541013 NCAPD3P42695 1498 aa30.07■■■□□ 2.4
GOLGA3-206ENST00000541013 ATAD2BQ9ULI0 1458 aa29.99■■■□□ 2.39
GOLGA3-206ENST00000541013 SMARCA4P51532 1647 aa29.96■■■□□ 2.39
GOLGA3-206ENST00000541013 SMARCA2P51531 1590 aa29.86■■■□□ 2.37
GOLGA3-206ENST00000541013 BAZ1AQ9NRL2 1556 aaPredicted RBP29.85■■■□□ 2.37
GOLGA3-206ENST00000541013 HMGXB3Q12766 1538 aa29.81■■■□□ 2.36
GOLGA3-206ENST00000541013 PEG3Q9GZU2 1588 aa29.76■■■□□ 2.35
GOLGA3-206ENST00000541013 MROH2BQ7Z745 1585 aa29.7■■■□□ 2.35
GOLGA3-206ENST00000541013 BAZ1BQ9UIG0 1483 aaKnown RBP29.61■■■□□ 2.33
GOLGA3-206ENST00000541013 NESP48681 1621 aa29.44■■■□□ 2.3
GOLGA3-206ENST00000541013 WIZO95785 1651 aa29.39■■■□□ 2.3
GOLGA3-206ENST00000541013 ERCC6Q03468 1493 aa29.38■■■□□ 2.29
GOLGA3-206ENST00000541013 CUX2O14529 1486 aa29.36■■■□□ 2.29
GOLGA3-206ENST00000541013 RSF1Q96T23 1441 aaPredicted RBP29.32■■■□□ 2.28
GOLGA3-206ENST00000541013 LAMC3Q9Y6N6 1575 aa29.26■■■□□ 2.28
GOLGA3-206ENST00000541013 CADPSQ9ULU8 1353 aa29.13■■■□□ 2.25
GOLGA3-206ENST00000541013 DNAJC5Q9H3Z4 198 aa29.1■■■□□ 2.25
GOLGA3-206ENST00000541013 THOC2Q8NI27 1593 aaKnown RBP29.09■■■□□ 2.25
GOLGA3-206ENST00000541013 PDS5BQ9NTI5 1447 aa29.08■■■□□ 2.25
GOLGA3-206ENST00000541013 KIF21AQ7Z4S6 1674 aa29.02■■■□□ 2.24
GOLGA3-206ENST00000541013 TOP2AP11388 1531 aaKnown RBP28.99■■■□□ 2.23
GOLGA3-206ENST00000541013 CFTRP13569 1480 aa28.87■■■□□ 2.21
GOLGA3-206ENST00000541013 MRC2Q9UBG0 1479 aa28.82■■■□□ 2.2
GOLGA3-206ENST00000541013 WDR62O43379 1518 aa28.76■■■□□ 2.19
GOLGA3-206ENST00000541013 FANCD2Q9BXW9 1451 aa28.75■■■□□ 2.19
GOLGA3-206ENST00000541013 CEP164Q9UPV0 1460 aa28.72■■■□□ 2.19
GOLGA3-206ENST00000541013 CCDC88BA6NC98 1476 aa28.69■■■□□ 2.18
GOLGA3-206ENST00000541013 SUPT5HO00267 1087 aaKnown RBP28.6■■■□□ 2.17
GOLGA3-206ENST00000541013 URB2Q14146 1524 aaKnown RBP28.54■■■□□ 2.16
GOLGA3-206ENST00000541013 PRDM2Q13029 1718 aa28.49■■■□□ 2.15
GOLGA3-206ENST00000541013 TOPBP1Q92547 1522 aa28.26■■■□□ 2.11
GOLGA3-206ENST00000541013 ABCC8Q09428 1581 aa28.2■■■□□ 2.11
GOLGA3-206ENST00000541013 IFT140Q96RY7 1462 aa28.19■■■□□ 2.1
GOLGA3-206ENST00000541013 DNMBPQ6XZF7 1577 aa28.16■■■□□ 2.1
GOLGA3-206ENST00000541013 ZNF608Q9ULD9 1512 aaPredicted RBP28.13■■■□□ 2.09
GOLGA3-206ENST00000541013 OSCARQ8IYS5 282 aa28.05■■■□□ 2.08
GOLGA3-206ENST00000541013 TARBP1Q13395 1621 aaKnown RBP28.01■■■□□ 2.07
GOLGA3-206ENST00000541013 POLA1P09884 1462 aaPredicted RBP27.99■■■□□ 2.07
GOLGA3-206ENST00000541013 EIF4G3O43432 1585 aaKnown RBP27.92■■■□□ 2.06
GOLGA3-206ENST00000541013 AQRO60306 1485 aaKnown RBP eCLIP27.9■■■□□ 2.061e-6■■□□□ 11.4
GOLGA3-206ENST00000541013 CUX1P39880 1505 aa27.88■■■□□ 2.05
GOLGA3-206ENST00000541013 RAD54L2Q9Y4B4 1467 aa27.88■■■□□ 2.05
GOLGA3-206ENST00000541013 SOGA1O94964 1423 aa27.85■■■□□ 2.05
GOLGA3-206ENST00000541013 FGD5Q6ZNL6 1462 aa27.83■■■□□ 2.04
GOLGA3-206ENST00000541013 TDRD9Q8NDG6 1382 aaKnown RBP27.76■■■□□ 2.03
GOLGA3-206ENST00000541013 TRIM41Q8WV44 630 aa27.76■■■□□ 2.03
GOLGA3-206ENST00000541013 WDR97A6NE52 1622 aa27.72■■■□□ 2.03
GOLGA3-206ENST00000541013 CHD1O14646 1710 aa27.65■■■□□ 2.02
GOLGA3-206ENST00000541013 RIMBP3CA6NJZ7 1639 aa27.63■■■□□ 2.01
GOLGA3-206ENST00000541013 RIMBP3BA6NNM3 1639 aa27.63■■■□□ 2.01
GOLGA3-206ENST00000541013 RIMBP3Q9UFD9 1639 aa27.63■■■□□ 2.01
GOLGA3-206ENST00000541013 SYNJ1O43426 1573 aa27.62■■■□□ 2.01
GOLGA3-206ENST00000541013 WRNQ14191 1432 aaPredicted RBP eCLIP27.6■■■□□ 2.01
GOLGA3-206ENST00000541013 ARHGEF11O15085 1522 aa27.59■■■□□ 2.01
GOLGA3-206ENST00000541013 SNAPC4Q5SXM2 1469 aa27.58■■■□□ 2.01
GOLGA3-206ENST00000541013 GRIN2BQ13224 1484 aa27.57■■■□□ 2
GOLGA3-206ENST00000541013 ABCA10Q8WWZ4 1543 aa27.57■■■□□ 2
GOLGA3-206ENST00000541013 BIVM-ERCC5R4GMW8 1640 aa27.56■■■□□ 2
GOLGA3-206ENST00000541013 TOP2BQ02880 1626 aa27.56■■■□□ 2
GOLGA3-206ENST00000541013 FBLN2P98095 1184 aa27.55■■■□□ 2
GOLGA3-206ENST00000541013 MAGI1Q96QZ7 1491 aaPredicted RBP27.55■■■□□ 2
GOLGA3-206ENST00000541013 GAPVD1Q14C86 1478 aa27.51■■□□□ 1.99
GOLGA3-206ENST00000541013 ABCA5Q8WWZ7 1642 aa27.48■■□□□ 1.99
GOLGA3-206ENST00000541013 SYNJ2O15056 1496 aa27.45■■□□□ 1.99
GOLGA3-206ENST00000541013 CHMP7Q8WUX9 453 aaPredicted RBP27.45■■□□□ 1.98
GOLGA3-206ENST00000541013 CLASP1Q7Z460 1538 aa27.44■■□□□ 1.98
GOLGA3-206ENST00000541013 PBRM1Q86U86 1689 aa27.43■■□□□ 1.98
GOLGA3-206ENST00000541013 ARAP1Q96P48 1450 aa27.37■■□□□ 1.97
GOLGA3-206ENST00000541013 CYB5RLQ6IPT4 315 aa27.35■■□□□ 1.97
GOLGA3-206ENST00000541013 ADAMTS12P58397 1594 aa27.22■■□□□ 1.95
GOLGA3-206ENST00000541013 GRIN2AQ12879 1464 aa27.22■■□□□ 1.95
GOLGA3-206ENST00000541013 ERICH3Q5RHP9 1530 aa27.21■■□□□ 1.95
GOLGA3-206ENST00000541013 FHAD1B1AJZ9 1412 aa27.19■■□□□ 1.94
GOLGA3-206ENST00000541013 NUP160Q12769 1436 aa27.18■■□□□ 1.94
GOLGA3-206ENST00000541013 CEP170Q5SW79 1584 aa27.12■■□□□ 1.93
GOLGA3-206ENST00000541013 ERCC6L2Q5T890 1561 aa27.01■■□□□ 1.92
GOLGA3-206ENST00000541013 SHROOM2Q13796 1616 aa27.01■■□□□ 1.91
GOLGA3-206ENST00000541013 KIF27Q86VH2 1401 aa26.99■■□□□ 1.91
GOLGA3-206ENST00000541013 IGF1RP08069 1367 aa26.98■■□□□ 1.91
GOLGA3-206ENST00000541013 RUSC2Q8N2Y8 1516 aa26.91■■□□□ 1.9
GOLGA3-206ENST00000541013 JPH4Q96JJ6 628 aa26.88■■□□□ 1.89
GOLGA3-206ENST00000541013 TRHP20396 242 aaPredicted RBP26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms