RNA–Protein interactions for RNA: ENST00000540977.1

RFXANK-208, Transcript of regulatory factor X associated ankyrin containing protein, humanhuman

TSL 2

Gene RFXANK, Length 389 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFXANK-208ENST00000540977 NISCHQ9Y2I1 1504 aa27.05■■□□□ 1.92
RFXANK-208ENST00000540977 CCDC180Q9P1Z9 1646 aa24.43■■□□□ 1.5
RFXANK-208ENST00000540977 ABCC9O60706 1549 aa24.41■■□□□ 1.5
RFXANK-208ENST00000540977 RB1CC1Q8TDY2 1594 aa23.32■■□□□ 1.32
RFXANK-208ENST00000540977 NACADO15069 1562 aa23.14■■□□□ 1.3
RFXANK-208ENST00000540977 DNAJC5BQ9UF47 199 aa22.97■■□□□ 1.27
RFXANK-208ENST00000540977 MYO15BQ96JP2 1530 aa22.84■■□□□ 1.25
RFXANK-208ENST00000540977 DCAF8L2P0C7V8 631 aa22.76■■□□□ 1.23
RFXANK-208ENST00000540977 UNC13AQ9UPW8 1703 aa22.68■■□□□ 1.22
RFXANK-208ENST00000540977 PABPN1Q86U42 306 aaKnown RBP eCLIP22.64■■□□□ 1.21
RFXANK-208ENST00000540977 BICRAQ9NZM4 1560 aa22.54■■□□□ 1.2
RFXANK-208ENST00000540977 SHROOM4Q9ULL8 1493 aa22.46■■□□□ 1.19
RFXANK-208ENST00000540977 DCAF1Q9Y4B6 1507 aa22.44■■□□□ 1.18
RFXANK-208ENST00000540977 ZCCHC6Q5VYS8 1495 aaKnown RBP22.39■■□□□ 1.17
RFXANK-208ENST00000540977 CC2D2AQ9P2K1 1620 aa22.1■■□□□ 1.13
RFXANK-208ENST00000540977 SCRIBQ14160 1630 aa22.09■■□□□ 1.13
RFXANK-208ENST00000540977 CECR2Q9BXF3 1484 aa22.08■■□□□ 1.12
RFXANK-208ENST00000540977 EIF4G1Q04637 1599 aaKnown RBP22.04■■□□□ 1.12
RFXANK-208ENST00000540977 DNAJC5Q9H3Z4 198 aa21.37■■□□□ 1.01
RFXANK-208ENST00000540977 NCAPD3P42695 1498 aa21.33■■□□□ 1.01
RFXANK-208ENST00000540977 CUX2O14529 1486 aa21.28■■□□□ 1
RFXANK-208ENST00000540977 SMARCA2P51531 1590 aa21.2■□□□□ 0.98
RFXANK-208ENST00000540977 ATAD2BQ9ULI0 1458 aa21.19■□□□□ 0.98
RFXANK-208ENST00000540977 HMGXB3Q12766 1538 aa21.19■□□□□ 0.98
RFXANK-208ENST00000540977 ERCC6Q03468 1493 aa21.18■□□□□ 0.98
RFXANK-208ENST00000540977 SMARCA4P51532 1647 aa21.13■□□□□ 0.97
RFXANK-208ENST00000540977 BAZ1AQ9NRL2 1556 aaPredicted RBP21.06■□□□□ 0.96
RFXANK-208ENST00000540977 PEG3Q9GZU2 1588 aa21■□□□□ 0.95
RFXANK-208ENST00000540977 BAZ1BQ9UIG0 1483 aaKnown RBP21■□□□□ 0.95
RFXANK-208ENST00000540977 LAMC3Q9Y6N6 1575 aa20.9■□□□□ 0.94
RFXANK-208ENST00000540977 NESP48681 1621 aa20.89■□□□□ 0.94
RFXANK-208ENST00000540977 THOC2Q8NI27 1593 aaKnown RBP20.81■□□□□ 0.92
RFXANK-208ENST00000540977 PDS5BQ9NTI5 1447 aa20.78■□□□□ 0.92
RFXANK-208ENST00000540977 MROH2BQ7Z745 1585 aa20.76■□□□□ 0.91
RFXANK-208ENST00000540977 KIF21AQ7Z4S6 1674 aa20.68■□□□□ 0.9
RFXANK-208ENST00000540977 CADPSQ9ULU8 1353 aa20.65■□□□□ 0.9
RFXANK-208ENST00000540977 MRC2Q9UBG0 1479 aa20.57■□□□□ 0.88
RFXANK-208ENST00000540977 WDR62O43379 1518 aa20.53■□□□□ 0.88
RFXANK-208ENST00000540977 WIZO95785 1651 aa20.49■□□□□ 0.87
RFXANK-208ENST00000540977 CEP164Q9UPV0 1460 aa20.46■□□□□ 0.87
RFXANK-208ENST00000540977 FANCD2Q9BXW9 1451 aa20.39■□□□□ 0.85
RFXANK-208ENST00000540977 CFTRP13569 1480 aa20.38■□□□□ 0.85
RFXANK-208ENST00000540977 TOP2AP11388 1531 aaKnown RBP20.32■□□□□ 0.84
RFXANK-208ENST00000540977 RSF1Q96T23 1441 aaPredicted RBP20.3■□□□□ 0.84
RFXANK-208ENST00000540977 TRIM41Q8WV44 630 aa20.25■□□□□ 0.83
RFXANK-208ENST00000540977 OSCARQ8IYS5 282 aa20.22■□□□□ 0.83
RFXANK-208ENST00000540977 PRDM2Q13029 1718 aa20.21■□□□□ 0.83
RFXANK-208ENST00000540977 URB2Q14146 1524 aaKnown RBP20.19■□□□□ 0.82
RFXANK-208ENST00000540977 IFT140Q96RY7 1462 aa20.08■□□□□ 0.81
RFXANK-208ENST00000540977 ABCC8Q09428 1581 aa20.06■□□□□ 0.8
RFXANK-208ENST00000540977 CCDC88BA6NC98 1476 aa20.03■□□□□ 0.8
RFXANK-208ENST00000540977 TOPBP1Q92547 1522 aa19.98■□□□□ 0.79
RFXANK-208ENST00000540977 ZNF608Q9ULD9 1512 aaPredicted RBP19.93■□□□□ 0.78
RFXANK-208ENST00000540977 DNMBPQ6XZF7 1577 aa19.92■□□□□ 0.78
RFXANK-208ENST00000540977 RIMBP3CA6NJZ7 1639 aa19.92■□□□□ 0.78
RFXANK-208ENST00000540977 RIMBP3BA6NNM3 1639 aa19.92■□□□□ 0.78
RFXANK-208ENST00000540977 RIMBP3Q9UFD9 1639 aa19.92■□□□□ 0.78
RFXANK-208ENST00000540977 EIF4G3O43432 1585 aaKnown RBP19.88■□□□□ 0.77
RFXANK-208ENST00000540977 ARHGEF11O15085 1522 aa19.86■□□□□ 0.77
RFXANK-208ENST00000540977 TARBP1Q13395 1621 aaKnown RBP19.82■□□□□ 0.76
RFXANK-208ENST00000540977 SUPT5HO00267 1087 aaKnown RBP19.77■□□□□ 0.76
RFXANK-208ENST00000540977 WDR97A6NE52 1622 aa19.76■□□□□ 0.75
RFXANK-208ENST00000540977 POLA1P09884 1462 aaPredicted RBP19.76■□□□□ 0.75
RFXANK-208ENST00000540977 AQRO60306 1485 aaKnown RBP eCLIP19.74■□□□□ 0.751e-7■■■■■ 40.7
RFXANK-208ENST00000540977 CHD1O14646 1710 aa19.74■□□□□ 0.75
RFXANK-208ENST00000540977 CYB5RLQ6IPT4 315 aa19.67■□□□□ 0.74
RFXANK-208ENST00000540977 SOGA1O94964 1423 aa19.67■□□□□ 0.74
RFXANK-208ENST00000540977 FBLN2P98095 1184 aa19.64■□□□□ 0.73
RFXANK-208ENST00000540977 ARAP1Q96P48 1450 aa19.63■□□□□ 0.73
RFXANK-208ENST00000540977 MAGI1Q96QZ7 1491 aaPredicted RBP19.61■□□□□ 0.73
RFXANK-208ENST00000540977 RAD54L2Q9Y4B4 1467 aa19.61■□□□□ 0.73
RFXANK-208ENST00000540977 FGD5Q6ZNL6 1462 aa19.6■□□□□ 0.73
RFXANK-208ENST00000540977 TDRD9Q8NDG6 1382 aaKnown RBP19.59■□□□□ 0.73
RFXANK-208ENST00000540977 SYNJ1O43426 1573 aa19.58■□□□□ 0.73
RFXANK-208ENST00000540977 SNAPC4Q5SXM2 1469 aa19.57■□□□□ 0.72
RFXANK-208ENST00000540977 GRIN2BQ13224 1484 aa19.56■□□□□ 0.72
RFXANK-208ENST00000540977 CLASP1Q7Z460 1538 aa19.56■□□□□ 0.72
RFXANK-208ENST00000540977 CHMP7Q8WUX9 453 aaPredicted RBP19.54■□□□□ 0.72
RFXANK-208ENST00000540977 CUX1P39880 1505 aa19.53■□□□□ 0.72
RFXANK-208ENST00000540977 TRHP20396 242 aaPredicted RBP19.52■□□□□ 0.72
RFXANK-208ENST00000540977 SYNJ2O15056 1496 aa19.52■□□□□ 0.72
RFXANK-208ENST00000540977 GAPVD1Q14C86 1478 aa19.45■□□□□ 0.7
RFXANK-208ENST00000540977 PBRM1Q86U86 1689 aa19.44■□□□□ 0.7
RFXANK-208ENST00000540977 ABCA10Q8WWZ4 1543 aa19.43■□□□□ 0.7
RFXANK-208ENST00000540977 ABCA5Q8WWZ7 1642 aa19.39■□□□□ 0.69
RFXANK-208ENST00000540977 WRNQ14191 1432 aaPredicted RBP eCLIP19.32■□□□□ 0.68
RFXANK-208ENST00000540977 GRIN2AQ12879 1464 aa19.29■□□□□ 0.68
RFXANK-208ENST00000540977 ADAMTS12P58397 1594 aa19.25■□□□□ 0.67
RFXANK-208ENST00000540977 BIVM-ERCC5R4GMW8 1640 aa19.25■□□□□ 0.67
RFXANK-208ENST00000540977 NUP160Q12769 1436 aa19.25■□□□□ 0.67
RFXANK-208ENST00000540977 TOP2BQ02880 1626 aa19.24■□□□□ 0.67
RFXANK-208ENST00000540977 FHAD1B1AJZ9 1412 aa19.22■□□□□ 0.67
RFXANK-208ENST00000540977 ERICH3Q5RHP9 1530 aa19.21■□□□□ 0.67
RFXANK-208ENST00000540977 CEP170Q5SW79 1584 aa19.19■□□□□ 0.66
RFXANK-208ENST00000540977 SHROOM2Q13796 1616 aa19.18■□□□□ 0.66
RFXANK-208ENST00000540977 AEBP2Q6ZN18 517 aaPredicted RBP19.14■□□□□ 0.65
RFXANK-208ENST00000540977 ERCC6L2Q5T890 1561 aa19.11■□□□□ 0.65
RFXANK-208ENST00000540977 PRG4Q92954 1404 aaPredicted RBP19.03■□□□□ 0.64
RFXANK-208ENST00000540977 JPH4Q96JJ6 628 aa19.01■□□□□ 0.63
RFXANK-208ENST00000540977 RUSC2Q8N2Y8 1516 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms