RNA–Protein interactions for RNA: ENST00000540962.5

PSMD9-206, Transcript of proteasome 26S subunit, non-ATPase 9, humanhuman

TSL 2

Gene PSMD9, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD9-206ENST00000540962 NISCHQ9Y2I1 1504 aa39■■■■□ 3.83
PSMD9-206ENST00000540962 ABCC9O60706 1549 aa35.4■■■■□ 3.26
PSMD9-206ENST00000540962 CCDC180Q9P1Z9 1646 aa34.82■■■■□ 3.16
PSMD9-206ENST00000540962 DNAJC5BQ9UF47 199 aa33.66■■■□□ 2.98
PSMD9-206ENST00000540962 RB1CC1Q8TDY2 1594 aa33.41■■■□□ 2.94
PSMD9-206ENST00000540962 DCAF8L2P0C7V8 631 aa33.13■■■□□ 2.89
PSMD9-206ENST00000540962 NACADO15069 1562 aa33.08■■■□□ 2.89
PSMD9-206ENST00000540962 PABPN1Q86U42 306 aaKnown RBP eCLIP33■■■□□ 2.87
PSMD9-206ENST00000540962 UNC13AQ9UPW8 1703 aa32.65■■■□□ 2.82
PSMD9-206ENST00000540962 ZCCHC6Q5VYS8 1495 aaKnown RBP32.51■■■□□ 2.79
PSMD9-206ENST00000540962 BICRAQ9NZM4 1560 aa32.48■■■□□ 2.79
PSMD9-206ENST00000540962 MYO15BQ96JP2 1530 aa32.46■■■□□ 2.79
PSMD9-206ENST00000540962 DCAF1Q9Y4B6 1507 aa32.28■■■□□ 2.76
PSMD9-206ENST00000540962 CC2D2AQ9P2K1 1620 aa31.9■■■□□ 2.7
PSMD9-206ENST00000540962 CECR2Q9BXF3 1484 aa31.9■■■□□ 2.7
PSMD9-206ENST00000540962 SHROOM4Q9ULL8 1493 aa31.87■■■□□ 2.69
PSMD9-206ENST00000540962 SCRIBQ14160 1630 aa31.83■■■□□ 2.69
PSMD9-206ENST00000540962 EIF4G1Q04637 1599 aaKnown RBP31.72■■■□□ 2.67
PSMD9-206ENST00000540962 DNAJC5Q9H3Z4 198 aa31.15■■■□□ 2.58
PSMD9-206ENST00000540962 NCAPD3P42695 1498 aa30.58■■■□□ 2.49
PSMD9-206ENST00000540962 CUX2O14529 1486 aa30.57■■■□□ 2.48
PSMD9-206ENST00000540962 ERCC6Q03468 1493 aa30.57■■■□□ 2.48
PSMD9-206ENST00000540962 ATAD2BQ9ULI0 1458 aa30.45■■■□□ 2.47
PSMD9-206ENST00000540962 SMARCA4P51532 1647 aa30.33■■■□□ 2.45
PSMD9-206ENST00000540962 NESP48681 1621 aa30.3■■■□□ 2.44
PSMD9-206ENST00000540962 SMARCA2P51531 1590 aa30.29■■■□□ 2.44
PSMD9-206ENST00000540962 HMGXB3Q12766 1538 aa30.25■■■□□ 2.43
PSMD9-206ENST00000540962 BAZ1AQ9NRL2 1556 aaPredicted RBP30.24■■■□□ 2.43
PSMD9-206ENST00000540962 BAZ1BQ9UIG0 1483 aaKnown RBP30.13■■■□□ 2.41
PSMD9-206ENST00000540962 MROH2BQ7Z745 1585 aa30.07■■■□□ 2.4
PSMD9-206ENST00000540962 PEG3Q9GZU2 1588 aa30.03■■■□□ 2.4
PSMD9-206ENST00000540962 THOC2Q8NI27 1593 aaKnown RBP29.95■■■□□ 2.39
PSMD9-206ENST00000540962 LAMC3Q9Y6N6 1575 aa29.92■■■□□ 2.38
PSMD9-206ENST00000540962 PDS5BQ9NTI5 1447 aa29.82■■■□□ 2.36
PSMD9-206ENST00000540962 KIF21AQ7Z4S6 1674 aa29.82■■■□□ 2.36
PSMD9-206ENST00000540962 WIZO95785 1651 aa29.74■■■□□ 2.35
PSMD9-206ENST00000540962 TRIM41Q8WV44 630 aa29.7■■■□□ 2.35
PSMD9-206ENST00000540962 CADPSQ9ULU8 1353 aa29.67■■■□□ 2.34
PSMD9-206ENST00000540962 RSF1Q96T23 1441 aaPredicted RBP29.65■■■□□ 2.34
PSMD9-206ENST00000540962 MRC2Q9UBG0 1479 aa29.56■■■□□ 2.32
PSMD9-206ENST00000540962 WDR62O43379 1518 aa29.46■■■□□ 2.31
PSMD9-206ENST00000540962 TOP2AP11388 1531 aaKnown RBP29.44■■■□□ 2.3
PSMD9-206ENST00000540962 CEP164Q9UPV0 1460 aa29.37■■■□□ 2.29
PSMD9-206ENST00000540962 FANCD2Q9BXW9 1451 aa29.33■■■□□ 2.29
PSMD9-206ENST00000540962 OSCARQ8IYS5 282 aa29.26■■■□□ 2.27
PSMD9-206ENST00000540962 CFTRP13569 1480 aa29.22■■■□□ 2.27
PSMD9-206ENST00000540962 URB2Q14146 1524 aaKnown RBP29.1■■■□□ 2.25
PSMD9-206ENST00000540962 CCDC88BA6NC98 1476 aa29.03■■■□□ 2.24
PSMD9-206ENST00000540962 PRDM2Q13029 1718 aa28.91■■■□□ 2.22
PSMD9-206ENST00000540962 ZNF608Q9ULD9 1512 aaPredicted RBP28.84■■■□□ 2.21
PSMD9-206ENST00000540962 RIMBP3CA6NJZ7 1639 aa28.81■■■□□ 2.2
PSMD9-206ENST00000540962 RIMBP3BA6NNM3 1639 aa28.81■■■□□ 2.2
PSMD9-206ENST00000540962 RIMBP3Q9UFD9 1639 aa28.81■■■□□ 2.2
PSMD9-206ENST00000540962 IFT140Q96RY7 1462 aa28.79■■■□□ 2.2
PSMD9-206ENST00000540962 TOPBP1Q92547 1522 aa28.71■■■□□ 2.19
PSMD9-206ENST00000540962 ARHGEF11O15085 1522 aa28.69■■■□□ 2.18
PSMD9-206ENST00000540962 SUPT5HO00267 1087 aaKnown RBP28.68■■■□□ 2.18
PSMD9-206ENST00000540962 CYB5RLQ6IPT4 315 aa28.65■■■□□ 2.18
PSMD9-206ENST00000540962 ABCC8Q09428 1581 aa28.59■■■□□ 2.17
PSMD9-206ENST00000540962 EIF4G3O43432 1585 aaKnown RBP28.58■■■□□ 2.17
PSMD9-206ENST00000540962 AQRO60306 1485 aaKnown RBP eCLIP28.57■■■□□ 2.161e-6■■■■□ 24.3
PSMD9-206ENST00000540962 FBLN2P98095 1184 aa28.55■■■□□ 2.16
PSMD9-206ENST00000540962 DNMBPQ6XZF7 1577 aa28.53■■■□□ 2.16
PSMD9-206ENST00000540962 TRHP20396 242 aaPredicted RBP28.48■■■□□ 2.15
PSMD9-206ENST00000540962 CHD1O14646 1710 aa28.46■■■□□ 2.15
PSMD9-206ENST00000540962 TARBP1Q13395 1621 aaKnown RBP28.46■■■□□ 2.15
PSMD9-206ENST00000540962 POLA1P09884 1462 aaPredicted RBP28.4■■■□□ 2.14
PSMD9-206ENST00000540962 ARAP1Q96P48 1450 aa28.39■■■□□ 2.13
PSMD9-206ENST00000540962 RAD54L2Q9Y4B4 1467 aa28.36■■■□□ 2.13
PSMD9-206ENST00000540962 TDRD9Q8NDG6 1382 aaKnown RBP28.36■■■□□ 2.13
PSMD9-206ENST00000540962 SOGA1O94964 1423 aa28.32■■■□□ 2.12
PSMD9-206ENST00000540962 CUX1P39880 1505 aa28.23■■■□□ 2.11
PSMD9-206ENST00000540962 CHMP7Q8WUX9 453 aaPredicted RBP28.22■■■□□ 2.11
PSMD9-206ENST00000540962 SNAPC4Q5SXM2 1469 aa28.21■■■□□ 2.11
PSMD9-206ENST00000540962 FGD5Q6ZNL6 1462 aa28.17■■■□□ 2.1
PSMD9-206ENST00000540962 CLASP1Q7Z460 1538 aa28.11■■■□□ 2.09
PSMD9-206ENST00000540962 SYNJ1O43426 1573 aa28.07■■■□□ 2.08
PSMD9-206ENST00000540962 GRIN2BQ13224 1484 aa28.06■■■□□ 2.08
PSMD9-206ENST00000540962 MAGI1Q96QZ7 1491 aaPredicted RBP28.06■■■□□ 2.08
PSMD9-206ENST00000540962 WDR97A6NE52 1622 aa28.05■■■□□ 2.08
PSMD9-206ENST00000540962 SYNJ2O15056 1496 aa28.01■■■□□ 2.07
PSMD9-206ENST00000540962 BIVM-ERCC5R4GMW8 1640 aa27.97■■■□□ 2.07
PSMD9-206ENST00000540962 WRNQ14191 1432 aaPredicted RBP eCLIP27.95■■■□□ 2.07
PSMD9-206ENST00000540962 TOP2BQ02880 1626 aa27.95■■■□□ 2.06
PSMD9-206ENST00000540962 GAPVD1Q14C86 1478 aa27.93■■■□□ 2.06
PSMD9-206ENST00000540962 AEBP2Q6ZN18 517 aaPredicted RBP27.92■■■□□ 2.06
PSMD9-206ENST00000540962 PBRM1Q86U86 1689 aa27.87■■■□□ 2.05
PSMD9-206ENST00000540962 ABCA10Q8WWZ4 1543 aa27.85■■■□□ 2.05
PSMD9-206ENST00000540962 ABCA5Q8WWZ7 1642 aa27.81■■■□□ 2.04
PSMD9-206ENST00000540962 ERCC6L2Q5T890 1561 aa27.72■■■□□ 2.03
PSMD9-206ENST00000540962 GRIN2AQ12879 1464 aa27.7■■■□□ 2.02
PSMD9-206ENST00000540962 CEP170Q5SW79 1584 aa27.61■■■□□ 2.01
PSMD9-206ENST00000540962 NUP160Q12769 1436 aa27.59■■■□□ 2.01
PSMD9-206ENST00000540962 ADAMTS12P58397 1594 aa27.58■■■□□ 2.01
PSMD9-206ENST00000540962 FHAD1B1AJZ9 1412 aa27.54■■■□□ 2
PSMD9-206ENST00000540962 ERICH3Q5RHP9 1530 aa27.51■■■□□ 2
PSMD9-206ENST00000540962 SHROOM2Q13796 1616 aa27.49■■□□□ 1.99
PSMD9-206ENST00000540962 PRG4Q92954 1404 aaPredicted RBP27.44■■□□□ 1.98
PSMD9-206ENST00000540962 JPH4Q96JJ6 628 aa27.44■■□□□ 1.98
PSMD9-206ENST00000540962 KIF13AQ9H1H9 1805 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms